RNA–Protein interactions for RNA: ENSMUST00000056889.14

Chd4-201, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Chd4, Length 6,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-201ENSMUST00000056889 P3h3Q8CG70 732 aa19.61■□□□□ 0.73
Chd4-201ENSMUST00000056889 Trim30dE9PWL0 497 aa19.59■□□□□ 0.73
Chd4-201ENSMUST00000056889 Ccdc9Q8VC31 543 aaKnown RBP19.59■□□□□ 0.73
Chd4-201ENSMUST00000056889 Fkbp15Q6P9Q6 1216 aaKnown RBP19.58■□□□□ 0.73
Chd4-201ENSMUST00000056889 Spryd3E9Q9B3 442 aa19.55■□□□□ 0.72
Chd4-201ENSMUST00000056889 Fgd1P52734 960 aa19.54■□□□□ 0.72
Chd4-201ENSMUST00000056889 Plcb2A3KGF7 1181 aa19.53■□□□□ 0.72
Chd4-201ENSMUST00000056889 Znf316Q6PGE4 1016 aa19.53■□□□□ 0.72
Chd4-201ENSMUST00000056889 Npm1Q61937 292 aaKnown RBP19.49■□□□□ 0.71
Chd4-201ENSMUST00000056889 Irx6Q9ER75 438 aa19.46■□□□□ 0.71
Chd4-201ENSMUST00000056889 Chic2Q9D9G3 165 aa19.44■□□□□ 0.7
Chd4-201ENSMUST00000056889 Apbb1Q9QXJ1 710 aa19.44■□□□□ 0.7
Chd4-201ENSMUST00000056889 Clip1Q922J3 1391 aa19.42■□□□□ 0.7
Chd4-201ENSMUST00000056889 Ccdc27Q3V036 639 aa19.42■□□□□ 0.7
Chd4-201ENSMUST00000056889 Dbr1Q923B1 550 aa19.39■□□□□ 0.69
Chd4-201ENSMUST00000056889 Abcc9P70170 1546 aa19.39■□□□□ 0.69
Chd4-201ENSMUST00000056889 Aebp2Q9Z248 504 aaKnown RBP19.33■□□□□ 0.68
Chd4-201ENSMUST00000056889 SafbD3YXK2 937 aaKnown RBP19.32■□□□□ 0.68
Chd4-201ENSMUST00000056889 Armcx1Q9CX83 456 aa19.32■□□□□ 0.68
Chd4-201ENSMUST00000056889 Tnnt2P50752 301 aa19.3■□□□□ 0.68
Chd4-201ENSMUST00000056889 Ofd1Q80Z25 1017 aa19.3■□□□□ 0.68
Chd4-201ENSMUST00000056889 Taok2Q6ZQ29 1240 aa19.28■□□□□ 0.68
Chd4-201ENSMUST00000056889 Htatsf1Q8BGC0 757 aa19.27■□□□□ 0.68
Chd4-201ENSMUST00000056889 Irx3P81067 507 aa19.26■□□□□ 0.67
Chd4-201ENSMUST00000056889 Hdac5Q9Z2V6 1113 aa19.25■□□□□ 0.67
Chd4-201ENSMUST00000056889 B4galnt3Q6L8S8 986 aa19.25■□□□□ 0.67
Chd4-201ENSMUST00000056889 Dcaf1Q80TR8 1506 aa19.24■□□□□ 0.67
Chd4-201ENSMUST00000056889 Slc4a3P16283 1227 aa19.23■□□□□ 0.67
Chd4-201ENSMUST00000056889 Neurod2Q62414 383 aa19.22■□□□□ 0.67
Chd4-201ENSMUST00000056889 Clstn1Q9EPL2 979 aa19.21■□□□□ 0.67
Chd4-201ENSMUST00000056889 Erich6bQ9D4S6 220 aa19.19■□□□□ 0.66
Chd4-201ENSMUST00000056889 Dnttip2Q8R2M2 758 aaKnown RBP19.18■□□□□ 0.66
Chd4-201ENSMUST00000056889 Znf326O88291 580 aa19.17■□□□□ 0.66
Chd4-201ENSMUST00000056889 Ccer2J3QPU5 274 aa19.16■□□□□ 0.66
Chd4-201ENSMUST00000056889 Rgl3Q3UYI5 709 aa19.14■□□□□ 0.65
Chd4-201ENSMUST00000056889 Casc1Q6TDU8 730 aa19.11■□□□□ 0.65
Chd4-201ENSMUST00000056889 Rtn4Q99P72 1162 aaKnown RBP19.11■□□□□ 0.65
Chd4-201ENSMUST00000056889 Ppm1gQ61074 542 aa19.1■□□□□ 0.65
Chd4-201ENSMUST00000056889 PnnO35691 725 aaKnown RBP19.09■□□□□ 0.65
Chd4-201ENSMUST00000056889 Adam1bQ8R534 806 aa19.06■□□□□ 0.64
Chd4-201ENSMUST00000056889 AU015836B2RUM3 263 aa19.05■□□□□ 0.64
Chd4-201ENSMUST00000056889 BlmO88700 1416 aa19.04■□□□□ 0.64
Chd4-201ENSMUST00000056889 Gm6268A2A3U9 297 aa19.03■□□□□ 0.64
Chd4-201ENSMUST00000056889 Pcmtd1P59913 357 aa19.03■□□□□ 0.64
Chd4-201ENSMUST00000056889 Grwd1Q810D6 446 aaKnown RBP19.02■□□□□ 0.63
Chd4-201ENSMUST00000056889 Mak16Q8BGS0 296 aaKnown RBP19.01■□□□□ 0.63
Chd4-201ENSMUST00000056889 Kdm2aP59997 1161 aa18.99■□□□□ 0.63
Chd4-201ENSMUST00000056889 Pes1Q9EQ61 584 aaKnown RBP18.97■□□□□ 0.63
Chd4-201ENSMUST00000056889 Cep164Q5DU05 1446 aa18.96■□□□□ 0.63
Chd4-201ENSMUST00000056889 MsnP26041 577 aaKnown RBP18.95■□□□□ 0.62
Chd4-201ENSMUST00000056889 1700019A02RikA0A087WPV9 146 aa18.94■□□□□ 0.62
Chd4-201ENSMUST00000056889 Map7O88735 730 aa18.93■□□□□ 0.62
Chd4-201ENSMUST00000056889 Hsp90b1P08113 802 aaKnown RBP18.93■□□□□ 0.62
Chd4-201ENSMUST00000056889 Ecm2Q5FW85 670 aa18.91■□□□□ 0.62
Chd4-201ENSMUST00000056889 Safb2Q80YR5 991 aaKnown RBP18.91■□□□□ 0.62
Chd4-201ENSMUST00000056889 Podxl2Q8CAE9 603 aa18.9■□□□□ 0.62
Chd4-201ENSMUST00000056889 Supt16hQ920B9 1047 aa18.88■□□□□ 0.61
Chd4-201ENSMUST00000056889 Mapk8ip3Q9ESN9 1337 aa18.86■□□□□ 0.61
Chd4-201ENSMUST00000056889 Gpatch11Q3UFS4 262 aa18.86■□□□□ 0.61
Chd4-201ENSMUST00000056889 Card11Q8CIS0 1159 aa18.86■□□□□ 0.61
Chd4-201ENSMUST00000056889 Sh3bp5Q9Z131 463 aa18.85■□□□□ 0.61
Chd4-201ENSMUST00000056889 IbspQ61711 324 aa18.83■□□□□ 0.61
Chd4-201ENSMUST00000056889 NgefQ8CHT1 710 aa18.83■□□□□ 0.6
Chd4-201ENSMUST00000056889 Kiaa0754Q69ZZ9 979 aa18.82■□□□□ 0.6
Chd4-201ENSMUST00000056889 Exosc9Q9JHI7 438 aaKnown RBP18.81■□□□□ 0.6
Chd4-201ENSMUST00000056889 Clstn2Q9ER65 966 aa18.8■□□□□ 0.6
Chd4-201ENSMUST00000056889 Calcoco2A2A6M5 331 aa18.79■□□□□ 0.6
Chd4-201ENSMUST00000056889 Dnai1Q8C0M8 701 aa18.79■□□□□ 0.6
Chd4-201ENSMUST00000056889 IqubQ8CDK3 788 aa18.78■□□□□ 0.6
Chd4-201ENSMUST00000056889 Wwc2Q6NXJ0 1187 aa18.77■□□□□ 0.6
Chd4-201ENSMUST00000056889 Cnga1P29974 684 aa18.77■□□□□ 0.6
Chd4-201ENSMUST00000056889 Anapc15P60007 132 aa18.77■□□□□ 0.6
Chd4-201ENSMUST00000056889 Ipo9Q91YE6 1041 aa18.77■□□□□ 0.6
Chd4-201ENSMUST00000056889 Rrp12Q6P5B0 1295 aaKnown RBP18.77■□□□□ 0.59
Chd4-201ENSMUST00000056889 Srpk2O54781 681 aaKnown RBP18.75■□□□□ 0.59
Chd4-201ENSMUST00000056889 Gm20521D3Z5F7 333 aa18.74■□□□□ 0.59
Chd4-201ENSMUST00000056889 MccE9PWI3 1003 aa18.74■□□□□ 0.59
Chd4-201ENSMUST00000056889 KnstrnQ9D9Z1 312 aaKnown RBP18.74■□□□□ 0.59
Chd4-201ENSMUST00000056889 CgnP59242 1191 aa18.74■□□□□ 0.59
Chd4-201ENSMUST00000056889 SetQ9EQU5 289 aaKnown RBP18.74■□□□□ 0.59
Chd4-201ENSMUST00000056889 SlkO54988 1233 aa18.73■□□□□ 0.59
Chd4-201ENSMUST00000056889 Gtf3c3Q3TMP1 882 aa18.73■□□□□ 0.59
Chd4-201ENSMUST00000056889 Rassf8Q8CJ96 419 aa18.72■□□□□ 0.59
Chd4-201ENSMUST00000056889 Tcerg1Q8CGF7 1100 aaKnown RBP18.72■□□□□ 0.59
Chd4-201ENSMUST00000056889 Mical1Q8VDP3 1048 aa18.72■□□□□ 0.59
Chd4-201ENSMUST00000056889 Rwdd1Q9CQK7 243 aa18.71■□□□□ 0.59
Chd4-201ENSMUST00000056889 Mroh3A0A1D5RM54 893 aa18.7■□□□□ 0.58
Chd4-201ENSMUST00000056889 Mfap1aC0HKD8 439 aaKnown RBP18.69■□□□□ 0.58
Chd4-201ENSMUST00000056889 Mfap1bC0HKD9 439 aaKnown RBP18.69■□□□□ 0.58
Chd4-201ENSMUST00000056889 ChgaP26339 463 aaKnown RBP18.69■□□□□ 0.58
Chd4-201ENSMUST00000056889 Gm973E9Q295 1059 aa18.68■□□□□ 0.58
Chd4-201ENSMUST00000056889 Samd1D3YXK1 519 aa18.68■□□□□ 0.58
Chd4-201ENSMUST00000056889 Setd5Q5XJV7 1441 aa18.67■□□□□ 0.58
Chd4-201ENSMUST00000056889 Chmp5Q9D7S9 219 aa18.67■□□□□ 0.58
Chd4-201ENSMUST00000056889 Brd4Q9ESU6 1400 aaKnown RBP18.67■□□□□ 0.58
Chd4-201ENSMUST00000056889 Ubap1lG3UW59 384 aa18.66■□□□□ 0.58
Chd4-201ENSMUST00000056889 Plin1Q8CGN5 517 aa18.66■□□□□ 0.58
Chd4-201ENSMUST00000056889 Stag3O70576 1240 aa18.65■□□□□ 0.58
Chd4-201ENSMUST00000056889 Cluap1Q8R3P7 413 aa18.65■□□□□ 0.58
Chd4-201ENSMUST00000056889 Senp3Q9EP97 568 aaKnown RBP18.64■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms