RNA–Protein interactions for RNA: ENSMUST00000056889.14

Chd4-201, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Chd4, Length 6,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-201ENSMUST00000056889 Rhox8Q6VSS7 320 aa25.6■■□□□ 1.69
Chd4-201ENSMUST00000056889 Ehmt2Q9Z148 1263 aaKnown RBP24.18■■□□□ 1.46
Chd4-201ENSMUST00000056889 Rpgrip1Q9EPQ2 1331 aa23.94■■□□□ 1.42
Chd4-201ENSMUST00000056889 Las1lA2BE28 776 aaKnown RBP23.71■■□□□ 1.39
Chd4-201ENSMUST00000056889 Cngb1E1AZ71 1325 aa23.7■■□□□ 1.38
Chd4-201ENSMUST00000056889 Wdr66E9Q743 1299 aa23.5■■□□□ 1.35
Chd4-201ENSMUST00000056889 Pelp1Q9DBD5 1123 aaKnown RBP23.3■■□□□ 1.32
Chd4-201ENSMUST00000056889 Zeb1Q64318 1117 aa23.24■■□□□ 1.31
Chd4-201ENSMUST00000056889 Amer1Q7TS75 1132 aa23.2■■□□□ 1.3
Chd4-201ENSMUST00000056889 Ube2uB1AUC4 352 aa22.87■■□□□ 1.25
Chd4-201ENSMUST00000056889 CenpbP27790 599 aa22.62■■□□□ 1.21
Chd4-201ENSMUST00000056889 Ccdc136Q3TVA9 1136 aa22.59■■□□□ 1.21
Chd4-201ENSMUST00000056889 Gab3Q8BSM5 595 aa22.55■■□□□ 1.2
Chd4-201ENSMUST00000056889 Ttbk1Q6PCN3 1308 aa22.47■■□□□ 1.19
Chd4-201ENSMUST00000056889 Esf1Q3V1V3 845 aaKnown RBP22.38■■□□□ 1.17
Chd4-201ENSMUST00000056889 Slc24a1Q91WD8 1130 aa22.32■■□□□ 1.16
Chd4-201ENSMUST00000056889 Myt1lP97500 1187 aa22.17■■□□□ 1.14
Chd4-201ENSMUST00000056889 Npm2Q80W85 207 aa22.16■■□□□ 1.14
Chd4-201ENSMUST00000056889 4930567H17RikQ3V0K5 233 aa22.03■■□□□ 1.12
Chd4-201ENSMUST00000056889 Acin1Q9JIX8 1338 aaKnown RBP22.02■■□□□ 1.11
Chd4-201ENSMUST00000056889 4933416C03RikQ3V063 378 aa21.98■■□□□ 1.11
Chd4-201ENSMUST00000056889 UbtfP25976 765 aaKnown RBP21.91■■□□□ 1.1
Chd4-201ENSMUST00000056889 Trim41Q5NCC3 630 aa21.88■■□□□ 1.09
Chd4-201ENSMUST00000056889 Stra8P70278 393 aa21.82■■□□□ 1.08
Chd4-201ENSMUST00000056889 Cdk11bP24788 784 aaKnown RBP21.7■■□□□ 1.06
Chd4-201ENSMUST00000056889 NefmP08553 848 aa21.7■■□□□ 1.06
Chd4-201ENSMUST00000056889 Ppargc1bQ8VHJ7 1014 aa21.66■■□□□ 1.06
Chd4-201ENSMUST00000056889 Pcgf6Q99NA9 353 aa21.65■■□□□ 1.06
Chd4-201ENSMUST00000056889 Eif5bQ05D44 1216 aaKnown RBP21.61■■□□□ 1.05
Chd4-201ENSMUST00000056889 Myt1Q8CFC2 1127 aa21.53■■□□□ 1.04
Chd4-201ENSMUST00000056889 Nop58Q6DFW4 536 aaKnown RBP21.4■■□□□ 1.02
Chd4-201ENSMUST00000056889 Neurod1Q60867 357 aa21.35■■□□□ 1.01
Chd4-201ENSMUST00000056889 HrcG5E8J6 738 aa21.34■■□□□ 1.01
Chd4-201ENSMUST00000056889 NrdcQ8BHG1 1161 aa21.32■■□□□ 1
Chd4-201ENSMUST00000056889 NeflP08551 543 aa21.3■■□□□ 1
Chd4-201ENSMUST00000056889 Supt5hO55201 1082 aaKnown RBP21.28■■□□□ 1
Chd4-201ENSMUST00000056889 Tnnt3Q9QZ47 272 aa21.27■■□□□ 1
Chd4-201ENSMUST00000056889 DiexfQ8BTT6 772 aaKnown RBP21.26■□□□□ 0.99
Chd4-201ENSMUST00000056889 NclP09405 707 aaKnown RBP21.17■□□□□ 0.98
Chd4-201ENSMUST00000056889 Ap3b1Q9Z1T1 1105 aa21.11■□□□□ 0.97
Chd4-201ENSMUST00000056889 Fam50aQ9WV03 339 aaKnown RBP21.07■□□□□ 0.96
Chd4-201ENSMUST00000056889 Anp32bQ9EST5 272 aaKnown RBP21.02■□□□□ 0.96
Chd4-201ENSMUST00000056889 Gm38655A0A286YDK6 273 aa20.98■□□□□ 0.95
Chd4-201ENSMUST00000056889 DaxxO35613 739 aa20.97■□□□□ 0.95
Chd4-201ENSMUST00000056889 Os9Q8K2C7 672 aa20.96■□□□□ 0.95
Chd4-201ENSMUST00000056889 Rtl5Q5DTT4 599 aa20.94■□□□□ 0.94
Chd4-201ENSMUST00000056889 Il27Q8K3I6 234 aa20.92■□□□□ 0.94
Chd4-201ENSMUST00000056889 Ccdc180J3QNE4 1664 aa20.83■□□□□ 0.93
Chd4-201ENSMUST00000056889 TonslQ6NZL6 1363 aa20.83■□□□□ 0.92
Chd4-201ENSMUST00000056889 ArxO35085 564 aa20.76■□□□□ 0.91
Chd4-201ENSMUST00000056889 Anp32aO35381 247 aa20.7■□□□□ 0.9
Chd4-201ENSMUST00000056889 Mier1Q5UAK0 511 aa20.62■□□□□ 0.89
Chd4-201ENSMUST00000056889 Mapk8ip2Q9ERE9 830 aa20.62■□□□□ 0.89
Chd4-201ENSMUST00000056889 Csrnp3P59055 597 aa20.59■□□□□ 0.89
Chd4-201ENSMUST00000056889 Chic1Q8CBW7 227 aa20.57■□□□□ 0.88
Chd4-201ENSMUST00000056889 Zbtb7cQ8VCZ7 619 aa20.57■□□□□ 0.88
Chd4-201ENSMUST00000056889 Ythdc1E9Q5K9 736 aaKnown RBP20.55■□□□□ 0.88
Chd4-201ENSMUST00000056889 Zbtb4Q5F293 982 aa20.53■□□□□ 0.88
Chd4-201ENSMUST00000056889 NischQ80TM9 1593 aa20.48■□□□□ 0.87
Chd4-201ENSMUST00000056889 CatipB9EKE5 520 aa20.48■□□□□ 0.87
Chd4-201ENSMUST00000056889 Polr3glQ8R0C0 218 aa20.46■□□□□ 0.87
Chd4-201ENSMUST00000056889 Lmod3E9QA62 571 aa20.46■□□□□ 0.87
Chd4-201ENSMUST00000056889 Prdm10Q3UTQ7 1184 aa20.4■□□□□ 0.86
Chd4-201ENSMUST00000056889 Rtl1Q7M732 1744 aa20.39■□□□□ 0.86
Chd4-201ENSMUST00000056889 ClspnQ80YR7 1315 aa20.37■□□□□ 0.85
Chd4-201ENSMUST00000056889 Nlrp6Q91WS2 869 aa20.27■□□□□ 0.84
Chd4-201ENSMUST00000056889 Rangap1P46061 589 aaKnown RBP20.25■□□□□ 0.83
Chd4-201ENSMUST00000056889 Ppp4r2Q0VGB7 417 aa20.24■□□□□ 0.83
Chd4-201ENSMUST00000056889 Lmod2Q3UHZ5 550 aa20.24■□□□□ 0.83
Chd4-201ENSMUST00000056889 Hnrnpul2Q00PI9 745 aaKnown RBP20.21■□□□□ 0.83
Chd4-201ENSMUST00000056889 Plekhg3Q4VAC9 1341 aa20.21■□□□□ 0.83
Chd4-201ENSMUST00000056889 Vsig10D3YX43 558 aa20.19■□□□□ 0.82
Chd4-201ENSMUST00000056889 Upf2A2AT37 1269 aaKnown RBP20.17■□□□□ 0.82
Chd4-201ENSMUST00000056889 Ifnlr1Q8CGK5 535 aa20.16■□□□□ 0.82
Chd4-201ENSMUST00000056889 Anks4bQ8K3X6 423 aa20.14■□□□□ 0.81
Chd4-201ENSMUST00000056889 Sall2Q9QX96 1004 aa20.14■□□□□ 0.81
Chd4-201ENSMUST00000056889 Erich6D3Z6S9 713 aa20.09■□□□□ 0.81
Chd4-201ENSMUST00000056889 Eid3Q3V124 375 aa20.09■□□□□ 0.81
Chd4-201ENSMUST00000056889 Calr4Q3TQS0 420 aa20.07■□□□□ 0.8
Chd4-201ENSMUST00000056889 Atp1b4Q99ME6 356 aa20.07■□□□□ 0.8
Chd4-201ENSMUST00000056889 Aplp2Q06335 707 aa20.06■□□□□ 0.8
Chd4-201ENSMUST00000056889 Plppr3Q7TPB0 716 aa20.06■□□□□ 0.8
Chd4-201ENSMUST00000056889 DekQ7TNV0 380 aaKnown RBP20.05■□□□□ 0.8
Chd4-201ENSMUST00000056889 Hsp90aa1P07901 733 aaKnown RBP20.04■□□□□ 0.8
Chd4-201ENSMUST00000056889 Gm13697A2AK42 830 aa20■□□□□ 0.79
Chd4-201ENSMUST00000056889 Zcchc6Q5BLK4 1491 aaKnown RBP19.98■□□□□ 0.79
Chd4-201ENSMUST00000056889 Rad21Q61550 635 aaKnown RBP19.96■□□□□ 0.79
Chd4-201ENSMUST00000056889 Fam71e1A1L3C1 212 aa19.85■□□□□ 0.77
Chd4-201ENSMUST00000056889 Wdr43Q6ZQL4 677 aaKnown RBP19.85■□□□□ 0.77
Chd4-201ENSMUST00000056889 Trim44Q9QXA7 346 aa19.83■□□□□ 0.76
Chd4-201ENSMUST00000056889 Arid4bA2CG63 1314 aaKnown RBP19.81■□□□□ 0.76
Chd4-201ENSMUST00000056889 Trim26Q99PN3 545 aa19.71■□□□□ 0.75
Chd4-201ENSMUST00000056889 1700123L14RikQ3V2K7 440 aa19.7■□□□□ 0.74
Chd4-201ENSMUST00000056889 CanxP35564 591 aaKnown RBP19.69■□□□□ 0.74
Chd4-201ENSMUST00000056889 Gm13695A2AK44 830 aa19.69■□□□□ 0.74
Chd4-201ENSMUST00000056889 Hsp90ab1P11499 724 aaKnown RBP19.66■□□□□ 0.74
Chd4-201ENSMUST00000056889 PtmaP26350 111 aa19.65■□□□□ 0.74
Chd4-201ENSMUST00000056889 Gm35339A0A140LHH9 1649 aa19.65■□□□□ 0.74
Chd4-201ENSMUST00000056889 Bcl11aQ9QYE3 773 aa19.62■□□□□ 0.73
Chd4-201ENSMUST00000056889 Mrs2Q5NCE8 434 aa19.61■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 157.6 ms