RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Ppp4r2Q0VGB7 417 aa23.44■■□□□ 1.34
Pcdhac2-201ENSMUST00000047479 Rgl3Q3UYI5 709 aa23.42■■□□□ 1.34
Pcdhac2-201ENSMUST00000047479 Trim26Q99PN3 545 aa23.4■■□□□ 1.34
Pcdhac2-201ENSMUST00000047479 Hsp90aa1P07901 733 aaKnown RBP23.38■■□□□ 1.33
Pcdhac2-201ENSMUST00000047479 Kif15Q6P9L6 1387 aa23.35■■□□□ 1.33
Pcdhac2-201ENSMUST00000047479 Irx6Q9ER75 438 aa23.34■■□□□ 1.33
Pcdhac2-201ENSMUST00000047479 Arhgap27A2AB59 869 aa23.32■■□□□ 1.32
Pcdhac2-201ENSMUST00000047479 IqubQ8CDK3 788 aa23.32■■□□□ 1.32
Pcdhac2-201ENSMUST00000047479 Kdm2aP59997 1161 aa23.3■■□□□ 1.32
Pcdhac2-201ENSMUST00000047479 Rsf1E9PWW9 1441 aaKnown RBP23.29■■□□□ 1.32
Pcdhac2-201ENSMUST00000047479 Anks4bQ8K3X6 423 aa23.29■■□□□ 1.32
Pcdhac2-201ENSMUST00000047479 Srpk2O54781 681 aaKnown RBP23.23■■□□□ 1.31
Pcdhac2-201ENSMUST00000047479 Wdr43Q6ZQL4 677 aaKnown RBP23.21■■□□□ 1.31
Pcdhac2-201ENSMUST00000047479 DekQ7TNV0 380 aaKnown RBP23.21■■□□□ 1.31
Pcdhac2-201ENSMUST00000047479 Grwd1Q810D6 446 aaKnown RBP23.2■■□□□ 1.3
Pcdhac2-201ENSMUST00000047479 Ercc6F8VPZ5 1481 aa23.2■■□□□ 1.3
Pcdhac2-201ENSMUST00000047479 NacadQ5SWP3 1504 aa23.19■■□□□ 1.3
Pcdhac2-201ENSMUST00000047479 Mroh3A0A1D5RM54 893 aa23.19■■□□□ 1.3
Pcdhac2-201ENSMUST00000047479 CatipB9EKE5 520 aa23.18■■□□□ 1.3
Pcdhac2-201ENSMUST00000047479 Exosc9Q9JHI7 438 aaKnown RBP23.17■■□□□ 1.3
Pcdhac2-201ENSMUST00000047479 Vsig10D3YX43 558 aa23.16■■□□□ 1.3
Pcdhac2-201ENSMUST00000047479 Ccdc18Q640L5 1455 aa23.16■■□□□ 1.3
Pcdhac2-201ENSMUST00000047479 MyclP10166 368 aa23.16■■□□□ 1.3
Pcdhac2-201ENSMUST00000047479 Gm20521D3Z5F7 333 aa23.15■■□□□ 1.3
Pcdhac2-201ENSMUST00000047479 Rrp7aQ9D1C9 280 aaKnown RBP23.12■■□□□ 1.29
Pcdhac2-201ENSMUST00000047479 NgefQ8CHT1 710 aa23.09■■□□□ 1.29
Pcdhac2-201ENSMUST00000047479 Card11Q8CIS0 1159 aa23.07■■□□□ 1.28
Pcdhac2-201ENSMUST00000047479 Znf326O88291 580 aa23.07■■□□□ 1.28
Pcdhac2-201ENSMUST00000047479 Stk24Q99KH8 431 aa23.05■■□□□ 1.28
Pcdhac2-201ENSMUST00000047479 Golga3P55937 1487 aa23.04■■□□□ 1.28
Pcdhac2-201ENSMUST00000047479 Eea1Q8BL66 1411 aa23.04■■□□□ 1.28
Pcdhac2-201ENSMUST00000047479 Aplp2Q06335 707 aa23.04■■□□□ 1.28
Pcdhac2-201ENSMUST00000047479 Trim30dE9PWL0 497 aa23.03■■□□□ 1.28
Pcdhac2-201ENSMUST00000047479 Ofd1Q80Z25 1017 aa23.03■■□□□ 1.28
Pcdhac2-201ENSMUST00000047479 Hsp90ab1P11499 724 aaKnown RBP23.02■■□□□ 1.28
Pcdhac2-201ENSMUST00000047479 Mapk8ip3Q9ESN9 1337 aa23.01■■□□□ 1.27
Pcdhac2-201ENSMUST00000047479 Mtus2Q3UHD3 1353 aa23■■□□□ 1.27
Pcdhac2-201ENSMUST00000047479 Stag3O70576 1240 aa22.99■■□□□ 1.27
Pcdhac2-201ENSMUST00000047479 Ythdc1E9Q5K9 736 aaKnown RBP22.98■■□□□ 1.27
Pcdhac2-201ENSMUST00000047479 Rtn4Q99P72 1162 aaKnown RBP22.98■■□□□ 1.27
Pcdhac2-201ENSMUST00000047479 Apbb1Q9QXJ1 710 aa22.97■■□□□ 1.27
Pcdhac2-201ENSMUST00000047479 Neurod2Q62414 383 aa22.96■■□□□ 1.27
Pcdhac2-201ENSMUST00000047479 CanxP35564 591 aaKnown RBP22.93■■□□□ 1.26
Pcdhac2-201ENSMUST00000047479 Cwc22Q8C5N3 908 aaKnown RBP22.93■■□□□ 1.26
Pcdhac2-201ENSMUST00000047479 Arid4bA2CG63 1314 aaKnown RBP22.92■■□□□ 1.26
Pcdhac2-201ENSMUST00000047479 Gm6268A2A3U9 297 aa22.88■■□□□ 1.25
Pcdhac2-201ENSMUST00000047479 Baz1aO88379 1555 aa22.88■■□□□ 1.25
Pcdhac2-201ENSMUST00000047479 Lmod3E9QA62 571 aa22.88■■□□□ 1.25
Pcdhac2-201ENSMUST00000047479 Ppp1r18Q8BQ30 594 aa22.87■■□□□ 1.25
Pcdhac2-201ENSMUST00000047479 Iqcf3Q9D498 203 aa22.87■■□□□ 1.25
Pcdhac2-201ENSMUST00000047479 Trim44Q9QXA7 346 aa22.84■■□□□ 1.25
Pcdhac2-201ENSMUST00000047479 1700019A02RikA0A087WPV9 146 aa22.84■■□□□ 1.25
Pcdhac2-201ENSMUST00000047479 Cnga1P29974 684 aa22.82■■□□□ 1.24
Pcdhac2-201ENSMUST00000047479 Aebp2Q9Z248 504 aaKnown RBP22.82■■□□□ 1.24
Pcdhac2-201ENSMUST00000047479 Zfp777B9EKF4 885 aa22.81■■□□□ 1.24
Pcdhac2-201ENSMUST00000047479 Clstn1Q9EPL2 979 aa22.77■■□□□ 1.24
Pcdhac2-201ENSMUST00000047479 PtmaP26350 111 aa22.77■■□□□ 1.24
Pcdhac2-201ENSMUST00000047479 NudcO35685 332 aaKnown RBP22.76■■□□□ 1.23
Pcdhac2-201ENSMUST00000047479 Chmp4bQ9D8B3 224 aaKnown RBP22.75■■□□□ 1.23
Pcdhac2-201ENSMUST00000047479 Mia2Q91ZV0 1396 aa22.72■■□□□ 1.23
Pcdhac2-201ENSMUST00000047479 Pes1Q9EQ61 584 aaKnown RBP22.71■■□□□ 1.23
Pcdhac2-201ENSMUST00000047479 Plcb2A3KGF7 1181 aa22.7■■□□□ 1.23
Pcdhac2-201ENSMUST00000047479 Armcx1Q9CX83 456 aa22.69■■□□□ 1.22
Pcdhac2-201ENSMUST00000047479 Arid3cA6PWV5 409 aa22.68■■□□□ 1.22
Pcdhac2-201ENSMUST00000047479 PnnO35691 725 aaKnown RBP22.67■■□□□ 1.22
Pcdhac2-201ENSMUST00000047479 Map7O88735 730 aa22.65■■□□□ 1.22
Pcdhac2-201ENSMUST00000047479 Map4P27546 1125 aaKnown RBP22.65■■□□□ 1.22
Pcdhac2-201ENSMUST00000047479 Kif27Q7M6Z4 1394 aa22.65■■□□□ 1.22
Pcdhac2-201ENSMUST00000047479 Dbr1Q923B1 550 aa22.64■■□□□ 1.21
Pcdhac2-201ENSMUST00000047479 Ggt6Q6PDE7 497 aa22.63■■□□□ 1.21
Pcdhac2-201ENSMUST00000047479 AknaQ80VW7 1404 aa22.62■■□□□ 1.21
Pcdhac2-201ENSMUST00000047479 Hsp90b1P08113 802 aaKnown RBP22.61■■□□□ 1.21
Pcdhac2-201ENSMUST00000047479 Stk26Q99JT2 416 aa22.6■■□□□ 1.21
Pcdhac2-201ENSMUST00000047479 Htatsf1Q8BGC0 757 aa22.59■■□□□ 1.21
Pcdhac2-201ENSMUST00000047479 Ccdc9Q8VC31 543 aaKnown RBP22.57■■□□□ 1.2
Pcdhac2-201ENSMUST00000047479 Rtf1A2AQ19 715 aaKnown RBP22.57■■□□□ 1.2
Pcdhac2-201ENSMUST00000047479 Hspa5P20029 655 aaKnown RBP22.57■■□□□ 1.2
Pcdhac2-201ENSMUST00000047479 Ppm1gQ61074 542 aa22.54■■□□□ 1.2
Pcdhac2-201ENSMUST00000047479 Sh3bp5Q9Z131 463 aa22.54■■□□□ 1.2
Pcdhac2-201ENSMUST00000047479 Eif4g2Q62448 906 aaKnown RBP22.53■■□□□ 1.2
Pcdhac2-201ENSMUST00000047479 Plin1Q8CGN5 517 aa22.53■■□□□ 1.2
Pcdhac2-201ENSMUST00000047479 Pkd2O35245 966 aa22.52■■□□□ 1.2
Pcdhac2-201ENSMUST00000047479 Gtf2e1Q9D0D5 440 aa22.52■■□□□ 1.2
Pcdhac2-201ENSMUST00000047479 Ifit1bl1D3Z6F0 470 aa22.52■■□□□ 1.2
Pcdhac2-201ENSMUST00000047479 Rundc1Q0VDN7 615 aa22.52■■□□□ 1.2
Pcdhac2-201ENSMUST00000047479 Lemd3Q9WU40 921 aa22.52■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 Fhad1A6PWD2 1420 aa22.51■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 U2surpQ6NV83 1029 aaKnown RBP22.51■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 B4galnt3Q6L8S8 986 aa22.5■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 Psme1P97371 249 aa22.5■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 Pds5bQ4VA53 1446 aaKnown RBP22.49■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 Wwc2Q6NXJ0 1187 aa22.49■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 Casc1Q6TDU8 730 aa22.48■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 Rwdd1Q9CQK7 243 aa22.48■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 Rpap1Q80TE0 1409 aa22.47■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 Aebp1Q640N1 1128 aa22.47■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 KnstrnQ9D9Z1 312 aaKnown RBP22.47■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 Ecm2Q5FW85 670 aa22.46■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 MlecQ6ZQI3 291 aaKnown RBP22.46■■□□□ 1.19
Pcdhac2-201ENSMUST00000047479 Kdm5dQ62240 1548 aa22.45■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms