RNA–Protein interactions for RNA: ENSMUST00000024620.6

Chd1-201, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Chd1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-201ENSMUST00000024620 Podxl2Q8CAE9 603 aa13.95□□□□□ -0.18
Chd1-201ENSMUST00000024620 Cers3Q1A3B0 383 aa13.94□□□□□ -0.18
Chd1-201ENSMUST00000024620 Supt16hQ920B9 1047 aa13.94□□□□□ -0.18
Chd1-201ENSMUST00000024620 Myt1lP97500 1187 aa13.93□□□□□ -0.18
Chd1-201ENSMUST00000024620 Ecm2Q5FW85 670 aa13.92□□□□□ -0.18
Chd1-201ENSMUST00000024620 NclP09405 707 aaKnown RBP13.89□□□□□ -0.19
Chd1-201ENSMUST00000024620 Kcnn1Q9EQR3 537 aa13.87□□□□□ -0.19
Chd1-201ENSMUST00000024620 Nolc1E9Q5C9 702 aaKnown RBP13.87□□□□□ -0.19
Chd1-201ENSMUST00000024620 Thoc2B1AZI6 1594 aaKnown RBP13.87□□□□□ -0.19
Chd1-201ENSMUST00000024620 Il27Q8K3I6 234 aa13.87□□□□□ -0.19
Chd1-201ENSMUST00000024620 Znf692Q3U381 531 aa13.85□□□□□ -0.19
Chd1-201ENSMUST00000024620 NeflP08551 543 aa13.85□□□□□ -0.19
Chd1-201ENSMUST00000024620 Pdcl3Q8BVF2 240 aa13.85□□□□□ -0.19
Chd1-201ENSMUST00000024620 Hsp90aa1P07901 733 aaKnown RBP13.85□□□□□ -0.19
Chd1-201ENSMUST00000024620 Stra8P70278 393 aa13.84□□□□□ -0.19
Chd1-201ENSMUST00000024620 Tshz2Q68FE9 1030 aa13.84□□□□□ -0.19
Chd1-201ENSMUST00000024620 Arid4bA2CG63 1314 aaKnown RBP13.82□□□□□ -0.2
Chd1-201ENSMUST00000024620 AampJ3QN89 436 aa13.81□□□□□ -0.2
Chd1-201ENSMUST00000024620 NacadQ5SWP3 1504 aa13.8□□□□□ -0.2
Chd1-201ENSMUST00000024620 Znf710Q3U288 666 aa13.79□□□□□ -0.2
Chd1-201ENSMUST00000024620 Gtf2a1Q99PM3 378 aa13.77□□□□□ -0.2
Chd1-201ENSMUST00000024620 MyclP10166 368 aa13.73□□□□□ -0.21
Chd1-201ENSMUST00000024620 Washc2Q6PGL7 1334 aa13.73□□□□□ -0.21
Chd1-201ENSMUST00000024620 Ciz1Q8VEH2 845 aa13.73□□□□□ -0.21
Chd1-201ENSMUST00000024620 Gtf3c6Q9D8P7 227 aa13.73□□□□□ -0.21
Chd1-201ENSMUST00000024620 Calr4Q3TQS0 420 aa13.72□□□□□ -0.21
Chd1-201ENSMUST00000024620 Cnksr2Q80YA9 1032 aa13.71□□□□□ -0.21
Chd1-201ENSMUST00000024620 Ppp6r1Q7TSI3 856 aa13.7□□□□□ -0.22
Chd1-201ENSMUST00000024620 Rrp9Q91WM3 475 aaKnown RBP13.69□□□□□ -0.22
Chd1-201ENSMUST00000024620 Dnttip2Q8R2M2 758 aaKnown RBP13.69□□□□□ -0.22
Chd1-201ENSMUST00000024620 Anp32bQ9EST5 272 aaKnown RBP13.68□□□□□ -0.22
Chd1-201ENSMUST00000024620 TonslQ6NZL6 1363 aa13.68□□□□□ -0.22
Chd1-201ENSMUST00000024620 Rbm10Q99KG3 930 aaKnown RBP13.67□□□□□ -0.22
Chd1-201ENSMUST00000024620 DmtnQ9WV69 405 aa13.66□□□□□ -0.22
Chd1-201ENSMUST00000024620 Brd2Q7JJ13 798 aaKnown RBP13.65□□□□□ -0.23
Chd1-201ENSMUST00000024620 Rangap1P46061 589 aaKnown RBP13.64□□□□□ -0.23
Chd1-201ENSMUST00000024620 Ipo9Q91YE6 1041 aa13.64□□□□□ -0.23
Chd1-201ENSMUST00000024620 Gpatch11Q3UFS4 262 aa13.63□□□□□ -0.23
Chd1-201ENSMUST00000024620 Esf1Q3V1V3 845 aaKnown RBP13.63□□□□□ -0.23
Chd1-201ENSMUST00000024620 Wdr43Q6ZQL4 677 aaKnown RBP13.59□□□□□ -0.23
Chd1-201ENSMUST00000024620 Egfem1Q8C088 590 aa13.57□□□□□ -0.24
Chd1-201ENSMUST00000024620 Vgll3P85442 326 aa13.56□□□□□ -0.24
Chd1-201ENSMUST00000024620 NgefQ8CHT1 710 aa13.55□□□□□ -0.24
Chd1-201ENSMUST00000024620 BicraF8VPZ9 1578 aa13.55□□□□□ -0.24
Chd1-201ENSMUST00000024620 Liat1Q810M6 228 aa13.55□□□□□ -0.24
Chd1-201ENSMUST00000024620 Tmed8Q3UHI4 326 aa13.54□□□□□ -0.24
Chd1-201ENSMUST00000024620 Ythdc1E9Q5K9 736 aaKnown RBP13.53□□□□□ -0.24
Chd1-201ENSMUST00000024620 Stag3O70576 1240 aa13.53□□□□□ -0.24
Chd1-201ENSMUST00000024620 Hs1bp3Q3TC93 395 aa13.51□□□□□ -0.25
Chd1-201ENSMUST00000024620 Pde4cQ3UEI1 686 aa13.51□□□□□ -0.25
Chd1-201ENSMUST00000024620 Kdm5dQ62240 1548 aa13.5□□□□□ -0.25
Chd1-201ENSMUST00000024620 Kiaa1211Q5PR69 1207 aa13.5□□□□□ -0.25
Chd1-201ENSMUST00000024620 Sycp2Q9CUU3 1500 aa13.48□□□□□ -0.25
Chd1-201ENSMUST00000024620 Iqcf3Q9D498 203 aa13.47□□□□□ -0.25
Chd1-201ENSMUST00000024620 AU015836B2RUM3 263 aa13.46□□□□□ -0.25
Chd1-201ENSMUST00000024620 Ppp4r2Q0VGB7 417 aa13.46□□□□□ -0.26
Chd1-201ENSMUST00000024620 Pak3Q61036 559 aa13.46□□□□□ -0.26
Chd1-201ENSMUST00000024620 HomezQ80W88 542 aa13.44□□□□□ -0.26
Chd1-201ENSMUST00000024620 Cypt1Q8CH20 168 aa13.43□□□□□ -0.26
Chd1-201ENSMUST00000024620 Rtn4Q99P72 1162 aaKnown RBP13.43□□□□□ -0.26
Chd1-201ENSMUST00000024620 Zfp91Q62511 572 aa13.42□□□□□ -0.26
Chd1-201ENSMUST00000024620 Ccer2J3QPU5 274 aa13.42□□□□□ -0.26
Chd1-201ENSMUST00000024620 Ap3b1Q9Z1T1 1105 aa13.42□□□□□ -0.26
Chd1-201ENSMUST00000024620 Rpap1Q80TE0 1409 aa13.42□□□□□ -0.26
Chd1-201ENSMUST00000024620 Cc2d2aQ8CFW7 1633 aa13.41□□□□□ -0.26
Chd1-201ENSMUST00000024620 Gm13697A2AK42 830 aa13.41□□□□□ -0.26
Chd1-201ENSMUST00000024620 Ppp1r18Q8BQ30 594 aa13.4□□□□□ -0.26
Chd1-201ENSMUST00000024620 Nom1Q3UFM5 854 aaKnown RBP13.4□□□□□ -0.26
Chd1-201ENSMUST00000024620 4933416C03RikQ3V063 378 aa13.4□□□□□ -0.26
Chd1-201ENSMUST00000024620 AcrbpQ3V140 540 aa13.4□□□□□ -0.26
Chd1-201ENSMUST00000024620 DaxxO35613 739 aa13.37□□□□□ -0.27
Chd1-201ENSMUST00000024620 Fam50aQ9WV03 339 aaKnown RBP13.37□□□□□ -0.27
Chd1-201ENSMUST00000024620 Rad21Q61550 635 aaKnown RBP13.36□□□□□ -0.27
Chd1-201ENSMUST00000024620 Chic1Q8CBW7 227 aa13.36□□□□□ -0.27
Chd1-201ENSMUST00000024620 Stard8Q8K031 1019 aa13.36□□□□□ -0.27
Chd1-201ENSMUST00000024620 DekQ7TNV0 380 aaKnown RBP13.36□□□□□ -0.27
Chd1-201ENSMUST00000024620 Pdlim2Q8R1G6 349 aa13.36□□□□□ -0.27
Chd1-201ENSMUST00000024620 Styxl1Q9DAR2 321 aa13.35□□□□□ -0.27
Chd1-201ENSMUST00000024620 Kif20aP97329 887 aa13.34□□□□□ -0.27
Chd1-201ENSMUST00000024620 Fam163aQ8CAA5 168 aa13.34□□□□□ -0.27
Chd1-201ENSMUST00000024620 BbxQ8VBW5 907 aa13.34□□□□□ -0.27
Chd1-201ENSMUST00000024620 Sh3bp1P55194 680 aa13.32□□□□□ -0.28
Chd1-201ENSMUST00000024620 Tex2Q6ZPJ0 1128 aaKnown RBP13.32□□□□□ -0.28
Chd1-201ENSMUST00000024620 4933402E13RikQ9D4D2 429 aa13.31□□□□□ -0.28
Chd1-201ENSMUST00000024620 Pds5bQ4VA53 1446 aaKnown RBP13.31□□□□□ -0.28
Chd1-201ENSMUST00000024620 Fam43aQ8BUP8 424 aa13.3□□□□□ -0.28
Chd1-201ENSMUST00000024620 Hsp90b1P08113 802 aaKnown RBP13.29□□□□□ -0.28
Chd1-201ENSMUST00000024620 Tcerg1Q8CGF7 1100 aaKnown RBP13.27□□□□□ -0.29
Chd1-201ENSMUST00000024620 Zcwpw1Q6IR42 630 aa13.26□□□□□ -0.29
Chd1-201ENSMUST00000024620 Phf14Q9D4H9 881 aa13.26□□□□□ -0.29
Chd1-201ENSMUST00000024620 Fam135aQ6NS59 1506 aa13.26□□□□□ -0.29
Chd1-201ENSMUST00000024620 Rsf1E9PWW9 1441 aaKnown RBP13.26□□□□□ -0.29
Chd1-201ENSMUST00000024620 ChgaP26339 463 aaKnown RBP13.24□□□□□ -0.29
Chd1-201ENSMUST00000024620 Dusp27Q148W8 1138 aa13.24□□□□□ -0.29
Chd1-201ENSMUST00000024620 Cul9Q80TT8 1865 aa13.24□□□□□ -0.29
Chd1-201ENSMUST00000024620 Armcx1Q9CX83 456 aa13.24□□□□□ -0.29
Chd1-201ENSMUST00000024620 Ncapd3Q6ZQK0 1506 aa13.23□□□□□ -0.29
Chd1-201ENSMUST00000024620 ErmnQ5EBJ4 281 aa13.22□□□□□ -0.29
Chd1-201ENSMUST00000024620 Mink1Q9JM52 1308 aa13.22□□□□□ -0.29
Chd1-201ENSMUST00000024620 Sox12Q04890 314 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms