RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Kif15Q6P9L6 1387 aa13.03□□□□□ -0.32
Ctc1-201ENSMUST00000021278 Upf2A2AT37 1269 aaKnown RBP13.02□□□□□ -0.33
Ctc1-201ENSMUST00000021278 Ccdc9Q8VC31 543 aaKnown RBP13.01□□□□□ -0.33
Ctc1-201ENSMUST00000021278 Zbtb4Q5F293 982 aa12.99□□□□□ -0.33
Ctc1-201ENSMUST00000021278 Ccdc27Q3V036 639 aa12.99□□□□□ -0.33
Ctc1-201ENSMUST00000021278 Synj1Q8CHC4 1574 aa12.98□□□□□ -0.33
Ctc1-201ENSMUST00000021278 Cux2P70298 1426 aa12.97□□□□□ -0.33
Ctc1-201ENSMUST00000021278 Dnajc5P60904 198 aa12.97□□□□□ -0.33
Ctc1-201ENSMUST00000021278 Calr4Q3TQS0 420 aa12.97□□□□□ -0.33
Ctc1-201ENSMUST00000021278 Ythdc1E9Q5K9 736 aaKnown RBP12.96□□□□□ -0.34
Ctc1-201ENSMUST00000021278 Rsf1E9PWW9 1441 aaKnown RBP12.95□□□□□ -0.34
Ctc1-201ENSMUST00000021278 Gtf3c5Q8R2T8 520 aa12.93□□□□□ -0.34
Ctc1-201ENSMUST00000021278 Cttnbp2B9EJA2 1648 aa12.91□□□□□ -0.34
Ctc1-201ENSMUST00000021278 TonslQ6NZL6 1363 aa12.89□□□□□ -0.35
Ctc1-201ENSMUST00000021278 Baz1bQ9Z277 1479 aa12.87□□□□□ -0.35
Ctc1-201ENSMUST00000021278 NeflP08551 543 aa12.87□□□□□ -0.35
Ctc1-201ENSMUST00000021278 Zbtb7cQ8VCZ7 619 aa12.86□□□□□ -0.35
Ctc1-201ENSMUST00000021278 BccipQ9CWI3 316 aa12.85□□□□□ -0.35
Ctc1-201ENSMUST00000021278 Wdr43Q6ZQL4 677 aaKnown RBP12.84□□□□□ -0.35
Ctc1-201ENSMUST00000021278 Supt16hQ920B9 1047 aa12.83□□□□□ -0.36
Ctc1-201ENSMUST00000021278 Nolc1E9Q5C9 702 aaKnown RBP12.82□□□□□ -0.36
Ctc1-201ENSMUST00000021278 Unc13aQ4KUS2 1712 aa12.82□□□□□ -0.36
Ctc1-201ENSMUST00000021278 IbspQ61711 324 aa12.81□□□□□ -0.36
Ctc1-201ENSMUST00000021278 Rtl1Q7M732 1744 aa12.8□□□□□ -0.36
Ctc1-201ENSMUST00000021278 Zfp777B9EKF4 885 aa12.78□□□□□ -0.36
Ctc1-201ENSMUST00000021278 Cep164Q5DU05 1446 aa12.78□□□□□ -0.36
Ctc1-201ENSMUST00000021278 Znf692Q3U381 531 aa12.77□□□□□ -0.37
Ctc1-201ENSMUST00000021278 Lmod3E9QA62 571 aa12.74□□□□□ -0.37
Ctc1-201ENSMUST00000021278 Ipo4Q8VI75 1082 aa12.74□□□□□ -0.37
Ctc1-201ENSMUST00000021278 Anp32bQ9EST5 272 aaKnown RBP12.73□□□□□ -0.37
Ctc1-201ENSMUST00000021278 Znf316Q6PGE4 1016 aa12.73□□□□□ -0.37
Ctc1-201ENSMUST00000021278 Pabpn1Q8CCS6 302 aaKnown RBP12.71□□□□□ -0.37
Ctc1-201ENSMUST00000021278 Lrriq1Q0P5X1 1673 aa12.71□□□□□ -0.38
Ctc1-201ENSMUST00000021278 Dhx29Q6PGC1 1365 aaKnown RBP12.69□□□□□ -0.38
Ctc1-201ENSMUST00000021278 Urb2E9Q7L1 1524 aaKnown RBP12.68□□□□□ -0.38
Ctc1-201ENSMUST00000021278 Kif21aQ9QXL2 1672 aa12.67□□□□□ -0.38
Ctc1-201ENSMUST00000021278 Ccdc18Q640L5 1455 aa12.66□□□□□ -0.38
Ctc1-201ENSMUST00000021278 CatipB9EKE5 520 aa12.66□□□□□ -0.38
Ctc1-201ENSMUST00000021278 Myt1lP97500 1187 aa12.66□□□□□ -0.38
Ctc1-201ENSMUST00000021278 NclP09405 707 aaKnown RBP12.64□□□□□ -0.39
Ctc1-201ENSMUST00000021278 Podxl2Q8CAE9 603 aa12.63□□□□□ -0.39
Ctc1-201ENSMUST00000021278 Dnttip2Q8R2M2 758 aaKnown RBP12.63□□□□□ -0.39
Ctc1-201ENSMUST00000021278 Plb1Q3TTY0 1478 aa12.62□□□□□ -0.39
Ctc1-201ENSMUST00000021278 ArxO35085 564 aa12.61□□□□□ -0.39
Ctc1-201ENSMUST00000021278 AU015836B2RUM3 263 aa12.61□□□□□ -0.39
Ctc1-201ENSMUST00000021278 LrpprcQ6PB66 1392 aaKnown RBP12.6□□□□□ -0.39
Ctc1-201ENSMUST00000021278 Slc4a3P16283 1227 aa12.59□□□□□ -0.39
Ctc1-201ENSMUST00000021278 Vgll3P85442 326 aa12.59□□□□□ -0.39
Ctc1-201ENSMUST00000021278 Znf326O88291 580 aa12.58□□□□□ -0.4
Ctc1-201ENSMUST00000021278 Armcx1Q9CX83 456 aa12.58□□□□□ -0.4
Ctc1-201ENSMUST00000021278 AampJ3QN89 436 aa12.57□□□□□ -0.4
Ctc1-201ENSMUST00000021278 Ube2uB1AUC4 352 aa12.57□□□□□ -0.4
Ctc1-201ENSMUST00000021278 P3h3Q8CG70 732 aa12.55□□□□□ -0.4
Ctc1-201ENSMUST00000021278 Lamc3Q9R0B6 1581 aa12.55□□□□□ -0.4
Ctc1-201ENSMUST00000021278 TimelessQ9R1X4 1197 aa12.54□□□□□ -0.4
Ctc1-201ENSMUST00000021278 Golga3P55937 1487 aa12.54□□□□□ -0.4
Ctc1-201ENSMUST00000021278 Eid3Q3V124 375 aa12.52□□□□□ -0.4
Ctc1-201ENSMUST00000021278 Tnnt2P50752 301 aa12.51□□□□□ -0.41
Ctc1-201ENSMUST00000021278 Pdcl3Q8BVF2 240 aa12.51□□□□□ -0.41
Ctc1-201ENSMUST00000021278 Rbm10Q99KG3 930 aaKnown RBP12.5□□□□□ -0.41
Ctc1-201ENSMUST00000021278 CanxP35564 591 aaKnown RBP12.5□□□□□ -0.41
Ctc1-201ENSMUST00000021278 Spryd3E9Q9B3 442 aa12.5□□□□□ -0.41
Ctc1-201ENSMUST00000021278 Trim26Q99PN3 545 aa12.47□□□□□ -0.41
Ctc1-201ENSMUST00000021278 Pak3Q61036 559 aa12.47□□□□□ -0.41
Ctc1-201ENSMUST00000021278 Ccer2J3QPU5 274 aa12.46□□□□□ -0.41
Ctc1-201ENSMUST00000021278 Eif4g3Q80XI3 1579 aaKnown RBP12.46□□□□□ -0.41
Ctc1-201ENSMUST00000021278 Npm2Q80W85 207 aa12.45□□□□□ -0.42
Ctc1-201ENSMUST00000021278 DmtnQ9WV69 405 aa12.45□□□□□ -0.42
Ctc1-201ENSMUST00000021278 Crocc2F6XLV1 1638 aa12.45□□□□□ -0.42
Ctc1-201ENSMUST00000021278 DekQ7TNV0 380 aaKnown RBP12.43□□□□□ -0.42
Ctc1-201ENSMUST00000021278 Ipo9Q91YE6 1041 aa12.43□□□□□ -0.42
Ctc1-201ENSMUST00000021278 Shroom2A2ALU4 1481 aa12.43□□□□□ -0.42
Ctc1-201ENSMUST00000021278 PogzQ8BZH4 1409 aaKnown RBP12.42□□□□□ -0.42
Ctc1-201ENSMUST00000021278 Stard8Q8K031 1019 aa12.41□□□□□ -0.42
Ctc1-201ENSMUST00000021278 ChgaP26339 463 aaKnown RBP12.4□□□□□ -0.42
Ctc1-201ENSMUST00000021278 Ift140E9PY46 1464 aa12.4□□□□□ -0.42
Ctc1-201ENSMUST00000021278 Duox2A2AQ99 1517 aa12.4□□□□□ -0.42
Ctc1-201ENSMUST00000021278 Top2bQ64511 1612 aa12.4□□□□□ -0.42
Ctc1-201ENSMUST00000021278 Camsap1A2AHC3 1581 aa12.39□□□□□ -0.43
Ctc1-201ENSMUST00000021278 AknaQ80VW7 1404 aa12.39□□□□□ -0.43
Ctc1-201ENSMUST00000021278 Chrna2Q91X60 512 aa12.38□□□□□ -0.43
Ctc1-201ENSMUST00000021278 Fmn1Q05860 1466 aa12.37□□□□□ -0.43
Ctc1-201ENSMUST00000021278 Col17a1Q07563 1470 aa12.37□□□□□ -0.43
Ctc1-201ENSMUST00000021278 Trim44Q9QXA7 346 aa12.36□□□□□ -0.43
Ctc1-201ENSMUST00000021278 AcrbpQ3V140 540 aa12.36□□□□□ -0.43
Ctc1-201ENSMUST00000021278 4933402E13RikQ9D4D2 429 aa12.36□□□□□ -0.43
Ctc1-201ENSMUST00000021278 Fkbp15Q6P9Q6 1216 aaKnown RBP12.35□□□□□ -0.43
Ctc1-201ENSMUST00000021278 Q8BT18 775 aa12.34□□□□□ -0.43
Ctc1-201ENSMUST00000021278 Rad54l2Q99NG0 1466 aa12.34□□□□□ -0.43
Ctc1-201ENSMUST00000021278 Chic1Q8CBW7 227 aa12.34□□□□□ -0.43
Ctc1-201ENSMUST00000021278 Gtf2a1Q99PM3 378 aa12.34□□□□□ -0.43
Ctc1-201ENSMUST00000021278 Pcdh10E9PXQ7 1057 aa12.32□□□□□ -0.44
Ctc1-201ENSMUST00000021278 Arhgap27A2AB59 869 aa12.31□□□□□ -0.44
Ctc1-201ENSMUST00000021278 Plcd3Q8K2J0 785 aa12.31□□□□□ -0.44
Ctc1-201ENSMUST00000021278 Rrp9Q91WM3 475 aaKnown RBP12.31□□□□□ -0.44
Ctc1-201ENSMUST00000021278 Fam43aQ8BUP8 424 aa12.31□□□□□ -0.44
Ctc1-201ENSMUST00000021278 Vsig10D3YX43 558 aa12.3□□□□□ -0.44
Ctc1-201ENSMUST00000021278 Rusc2Q80U22 1514 aa12.3□□□□□ -0.44
Ctc1-201ENSMUST00000021278 Disp1Q3TDN0 1521 aa12.29□□□□□ -0.44
Ctc1-201ENSMUST00000021278 NgefQ8CHT1 710 aa12.29□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms