RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 NischQ80TM9 1593 aa16.01■□□□□ 0.15
Ctc1-201ENSMUST00000021278 Gm35339A0A140LHH9 1649 aa15.81■□□□□ 0.12
Ctc1-201ENSMUST00000021278 Rpgrip1Q9EPQ2 1331 aa15.72■□□□□ 0.11
Ctc1-201ENSMUST00000021278 Abcc9P70170 1546 aa15.64■□□□□ 0.09
Ctc1-201ENSMUST00000021278 Abcc8B2RUS7 1588 aa15.4■□□□□ 0.06
Ctc1-201ENSMUST00000021278 Las1lA2BE28 776 aaKnown RBP15.36■□□□□ 0.05
Ctc1-201ENSMUST00000021278 Ehmt2Q9Z148 1263 aaKnown RBP15.21■□□□□ 0.03
Ctc1-201ENSMUST00000021278 DiexfQ8BTT6 772 aaKnown RBP15.18■□□□□ 0.02
Ctc1-201ENSMUST00000021278 Pcgf6Q99NA9 353 aa15.06■□□□□ 0
Ctc1-201ENSMUST00000021278 CenpbP27790 599 aa15.05■□□□□ 0
Ctc1-201ENSMUST00000021278 Amer1Q7TS75 1132 aa14.97□□□□□ -0.01
Ctc1-201ENSMUST00000021278 ScribQ80U72 1612 aa14.86□□□□□ -0.03
Ctc1-201ENSMUST00000021278 Myt1Q8CFC2 1127 aa14.84□□□□□ -0.03
Ctc1-201ENSMUST00000021278 Acin1Q9JIX8 1338 aaKnown RBP14.76□□□□□ -0.05
Ctc1-201ENSMUST00000021278 Cngb1E1AZ71 1325 aa14.7□□□□□ -0.06
Ctc1-201ENSMUST00000021278 Rhox8Q6VSS7 320 aa14.68□□□□□ -0.06
Ctc1-201ENSMUST00000021278 Neurod1Q60867 357 aa14.58□□□□□ -0.08
Ctc1-201ENSMUST00000021278 Zeb1Q64318 1117 aa14.55□□□□□ -0.08
Ctc1-201ENSMUST00000021278 Supt5hO55201 1082 aaKnown RBP14.52□□□□□ -0.09
Ctc1-201ENSMUST00000021278 NacadQ5SWP3 1504 aa14.51□□□□□ -0.09
Ctc1-201ENSMUST00000021278 Kdm5dQ62240 1548 aa14.47□□□□□ -0.09
Ctc1-201ENSMUST00000021278 Bcl11aQ9QYE3 773 aa14.45□□□□□ -0.1
Ctc1-201ENSMUST00000021278 1700123L14RikQ3V2K7 440 aa14.35□□□□□ -0.11
Ctc1-201ENSMUST00000021278 Csrnp3P59055 597 aa14.32□□□□□ -0.12
Ctc1-201ENSMUST00000021278 Ttbk1Q6PCN3 1308 aa14.28□□□□□ -0.12
Ctc1-201ENSMUST00000021278 Gm38655A0A286YDK6 273 aa14.26□□□□□ -0.13
Ctc1-201ENSMUST00000021278 Wdr66E9Q743 1299 aa14.24□□□□□ -0.13
Ctc1-201ENSMUST00000021278 Dnajc5bQ9CQ94 199 aa14.23□□□□□ -0.13
Ctc1-201ENSMUST00000021278 Sycp2Q9CUU3 1500 aa14.2□□□□□ -0.14
Ctc1-201ENSMUST00000021278 PrkcshO08795 521 aa14.13□□□□□ -0.15
Ctc1-201ENSMUST00000021278 Pelp1Q9DBD5 1123 aaKnown RBP14.12□□□□□ -0.15
Ctc1-201ENSMUST00000021278 Cdk11bP24788 784 aaKnown RBP13.98□□□□□ -0.17
Ctc1-201ENSMUST00000021278 BicraF8VPZ9 1578 aa13.96□□□□□ -0.17
Ctc1-201ENSMUST00000021278 Rb1cc1Q9ESK9 1588 aa13.95□□□□□ -0.18
Ctc1-201ENSMUST00000021278 Dcaf1Q80TR8 1506 aa13.94□□□□□ -0.18
Ctc1-201ENSMUST00000021278 Aplp2Q06335 707 aa13.93□□□□□ -0.18
Ctc1-201ENSMUST00000021278 Anks4bQ8K3X6 423 aa13.93□□□□□ -0.18
Ctc1-201ENSMUST00000021278 Zcchc6Q5BLK4 1491 aaKnown RBP13.88□□□□□ -0.19
Ctc1-201ENSMUST00000021278 Ppargc1bQ8VHJ7 1014 aa13.85□□□□□ -0.19
Ctc1-201ENSMUST00000021278 Nop58Q6DFW4 536 aaKnown RBP13.84□□□□□ -0.19
Ctc1-201ENSMUST00000021278 Pds5bQ4VA53 1446 aaKnown RBP13.8□□□□□ -0.2
Ctc1-201ENSMUST00000021278 Fam71e1A1L3C1 212 aa13.76□□□□□ -0.21
Ctc1-201ENSMUST00000021278 Ifnlr1Q8CGK5 535 aa13.71□□□□□ -0.21
Ctc1-201ENSMUST00000021278 Mapk8ip2Q9ERE9 830 aa13.7□□□□□ -0.22
Ctc1-201ENSMUST00000021278 Sall2Q9QX96 1004 aa13.7□□□□□ -0.22
Ctc1-201ENSMUST00000021278 Baz1aO88379 1555 aa13.67□□□□□ -0.22
Ctc1-201ENSMUST00000021278 4933416C03RikQ3V063 378 aa13.63□□□□□ -0.23
Ctc1-201ENSMUST00000021278 NefmP08553 848 aa13.61□□□□□ -0.23
Ctc1-201ENSMUST00000021278 Ercc6F8VPZ5 1481 aa13.6□□□□□ -0.23
Ctc1-201ENSMUST00000021278 Atad2bE9Q166 1460 aaKnown RBP13.6□□□□□ -0.23
Ctc1-201ENSMUST00000021278 Trim41Q5NCC3 630 aa13.58□□□□□ -0.24
Ctc1-201ENSMUST00000021278 Pknox2Q8BG99 474 aa13.54□□□□□ -0.24
Ctc1-201ENSMUST00000021278 Rtl5Q5DTT4 599 aa13.54□□□□□ -0.24
Ctc1-201ENSMUST00000021278 Ubl4bQ9CQ84 188 aa13.52□□□□□ -0.24
Ctc1-201ENSMUST00000021278 Ccdc136Q3TVA9 1136 aa13.5□□□□□ -0.25
Ctc1-201ENSMUST00000021278 Thoc2B1AZI6 1594 aaKnown RBP13.48□□□□□ -0.25
Ctc1-201ENSMUST00000021278 Cc2d2aQ8CFW7 1633 aa13.47□□□□□ -0.25
Ctc1-201ENSMUST00000021278 Crybg2B7ZCC2 1516 aa13.46□□□□□ -0.25
Ctc1-201ENSMUST00000021278 Anp32aO35381 247 aa13.45□□□□□ -0.26
Ctc1-201ENSMUST00000021278 Tnnt3Q9QZ47 272 aa13.44□□□□□ -0.26
Ctc1-201ENSMUST00000021278 Cecr2E9Q2Z1 1453 aa13.42□□□□□ -0.26
Ctc1-201ENSMUST00000021278 Esf1Q3V1V3 845 aaKnown RBP13.42□□□□□ -0.26
Ctc1-201ENSMUST00000021278 HrcG5E8J6 738 aa13.39□□□□□ -0.27
Ctc1-201ENSMUST00000021278 Hdac5Q9Z2V6 1113 aa13.38□□□□□ -0.27
Ctc1-201ENSMUST00000021278 Smarca2Q6DIC0 1577 aa13.38□□□□□ -0.27
Ctc1-201ENSMUST00000021278 Smarca4Q3TKT4 1613 aaKnown RBP13.37□□□□□ -0.27
Ctc1-201ENSMUST00000021278 SafbD3YXK2 937 aaKnown RBP13.35□□□□□ -0.27
Ctc1-201ENSMUST00000021278 Iqgap2Q3UQ44 1575 aa13.35□□□□□ -0.27
Ctc1-201ENSMUST00000021278 Slc24a1Q91WD8 1130 aa13.34□□□□□ -0.27
Ctc1-201ENSMUST00000021278 Phldb1Q6PDH0 1371 aaKnown RBP13.33□□□□□ -0.28
Ctc1-201ENSMUST00000021278 DaxxO35613 739 aa13.28□□□□□ -0.28
Ctc1-201ENSMUST00000021278 Frmpd1A2AKB4 1549 aa13.26□□□□□ -0.29
Ctc1-201ENSMUST00000021278 Gab3Q8BSM5 595 aa13.25□□□□□ -0.29
Ctc1-201ENSMUST00000021278 Ccdc180J3QNE4 1664 aa13.24□□□□□ -0.29
Ctc1-201ENSMUST00000021278 Taok2Q6ZQ29 1240 aa13.23□□□□□ -0.29
Ctc1-201ENSMUST00000021278 Plcd4Q8K3R3 807 aa13.19□□□□□ -0.3
Ctc1-201ENSMUST00000021278 Fam135aQ6NS59 1506 aa13.19□□□□□ -0.3
Ctc1-201ENSMUST00000021278 Wdr62Q3U3T8 1523 aa13.19□□□□□ -0.3
Ctc1-201ENSMUST00000021278 Ap3b1Q9Z1T1 1105 aa13.19□□□□□ -0.3
Ctc1-201ENSMUST00000021278 Mier1Q5UAK0 511 aa13.18□□□□□ -0.3
Ctc1-201ENSMUST00000021278 Irx3P81067 507 aa13.18□□□□□ -0.3
Ctc1-201ENSMUST00000021278 Gtf3c3Q3TMP1 882 aa13.17□□□□□ -0.3
Ctc1-201ENSMUST00000021278 NrdcQ8BHG1 1161 aa13.17□□□□□ -0.3
Ctc1-201ENSMUST00000021278 ClspnQ80YR7 1315 aa13.17□□□□□ -0.3
Ctc1-201ENSMUST00000021278 4930567H17RikQ3V0K5 233 aa13.16□□□□□ -0.3
Ctc1-201ENSMUST00000021278 Plppr3Q7TPB0 716 aa13.16□□□□□ -0.3
Ctc1-201ENSMUST00000021278 UbtfP25976 765 aaKnown RBP13.14□□□□□ -0.31
Ctc1-201ENSMUST00000021278 Il27Q8K3I6 234 aa13.14□□□□□ -0.31
Ctc1-201ENSMUST00000021278 Stra8P70278 393 aa13.13□□□□□ -0.31
Ctc1-201ENSMUST00000021278 Hnrnpul2Q00PI9 745 aaKnown RBP13.13□□□□□ -0.31
Ctc1-201ENSMUST00000021278 Eif5bQ05D44 1216 aaKnown RBP13.12□□□□□ -0.31
Ctc1-201ENSMUST00000021278 Mrc2Q64449 1479 aa13.1□□□□□ -0.31
Ctc1-201ENSMUST00000021278 Npm1Q61937 292 aaKnown RBP13.08□□□□□ -0.32
Ctc1-201ENSMUST00000021278 Aebp2Q9Z248 504 aaKnown RBP13.07□□□□□ -0.32
Ctc1-201ENSMUST00000021278 Rtn4Q99P72 1162 aaKnown RBP13.06□□□□□ -0.32
Ctc1-201ENSMUST00000021278 Brd4Q9ESU6 1400 aaKnown RBP13.06□□□□□ -0.32
Ctc1-201ENSMUST00000021278 Fgd1P52734 960 aa13.05□□□□□ -0.32
Ctc1-201ENSMUST00000021278 Hsp90aa1P07901 733 aaKnown RBP13.05□□□□□ -0.32
Ctc1-201ENSMUST00000021278 CftrP26361 1476 aa13.04□□□□□ -0.32
Ctc1-201ENSMUST00000021278 Ppp4r2Q0VGB7 417 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms