RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ANKRD11Q6UB99 2663 aaPredicted RBP1.12□□□□□ -2.23
RTF1-207ENST00000561076 KIAA1551Q9HCM1 1747 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 TRPM7Q96QT4 1865 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 TRBV7-1A0A0A6YYK4 115 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 A0A0J9YY99 117 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 LOC100996750A0A140TA64 210 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 LOC285095A0A1B0GVY8 99 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 hADV29S1A0JD25 119 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 H3BQF6 201 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 J3QRE1 110 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 SIX6O95475 246 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 EDDM3BP56851 147 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 ADIRFQ15847 76 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 HCP5Q6MZN7 132 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 C10orf82Q8WW14 230 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 TRGV9Q99603 122 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 LIMD2Q9BT23 127 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 KRTAP4-6Q9BYQ5 205 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 MED9Q9NWA0 146 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 PRO1854Q9UHT4 67 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 PRO0461Q9UI25 63 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 LINC00312Q9Y6C7 94 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 MYH1P12882 1939 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 MYLKQ15746 1914 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 AKAP11Q9UKA4 1901 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 QRICH2Q9H0J4 1663 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 KIAA0100Q14667 2235 aaKnown RBP1.12□□□□□ -2.23
RTF1-207ENST00000561076 PTPRBP23467 1997 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 TOGARAM1Q9Y4F4 1720 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 MYO16Q9Y6X6 1858 aa1.12□□□□□ -2.23
RTF1-207ENST00000561076 RBBP6Q7Z6E9 1792 aaKnown RBP1.11□□□□□ -2.23
RTF1-207ENST00000561076 RGPD5Q99666 1765 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 PAPPA2Q9BXP8 1791 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 COL6A3P12111 3177 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 FAM208AQ9UK61 1670 aaKnown RBP1.11□□□□□ -2.23
RTF1-207ENST00000561076 ZNF462Q96JM2 2506 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 CXorf51AA0A1B0GTR3 108 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 A0A1W2PNU3 283 aaPredicted RBP1.11□□□□□ -2.23
RTF1-207ENST00000561076 K7EP34 96 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 IGHV3-30P01768 117 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 APOC3P02656 99 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 FREM3P0C091 2139 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 IGHV3-30-5P0DP03 117 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 ELOF1P60002 83 aaKnown RBP1.11□□□□□ -2.23
RTF1-207ENST00000561076 TMEM170BQ5T4T1 132 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 LINC00322Q6ZN03 302 aaPredicted RBP1.11□□□□□ -2.23
RTF1-207ENST00000561076 ZNF720Q7Z2F6 126 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 NPVFQ9HCQ7 196 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 DYNLRB1Q9NP97 96 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 NXT2Q9NPJ8 142 aaKnown RBP1.11□□□□□ -2.23
RTF1-207ENST00000561076 R4GMQ9 66 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 MON2Q7Z3U7 1717 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 PLXNA3P51805 1871 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 CPAMD8Q8IZJ3 1885 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 CACNA1DQ01668 2161 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 MAST4O15021 2626 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 FLNBO75369 2602 aaKnown RBP1.11□□□□□ -2.23
RTF1-207ENST00000561076 LAMB4A4D0S4 1761 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 HEATR5BQ9P2D3 2071 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 PIEZO1Q92508 2521 aa1.11□□□□□ -2.23
RTF1-207ENST00000561076 COL11A1P12107 1806 aaPredicted RBP1.1□□□□□ -2.23
RTF1-207ENST00000561076 BDP1A6H8Y1 2624 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 NAV2Q8IVL1 2488 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 SZT2Q5T011 3432 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 NRXN2Q9P2S2 1712 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 GPR179Q6PRD1 2367 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 TRBV7-3A0A075B6L6 115 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 TRBV6-7A0A0A0MS04 114 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 KANTRA0A1W2PQU2 76 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 CHKB-CPT1BH3BT56 60 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 FXYD1O00168 92 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 PPP1R17O96001 155 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 P0C880 135 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 RPL37AP61513 92 aaKnown RBP1.1□□□□□ -2.23
RTF1-207ENST00000561076 PMCHL1Q16048 86 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 TPRXLQ17RH7 258 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 KRTAP26-1Q6PEX3 210 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 C20orf197Q8N268 126 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 SERP2Q8N6R1 65 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 CACFD1Q9UGQ2 172 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 ADAMTS9Q9P2N4 1935 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 DLEC1Q9Y238 1755 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 CEP290O15078 2479 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 MAP2P11137 1827 aaKnown RBP1.1□□□□□ -2.23
RTF1-207ENST00000561076 COL4A5P29400 1685 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 ZNF831Q5JPB2 1677 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 CROCCQ5TZA2 2017 aa1.1□□□□□ -2.23
RTF1-207ENST00000561076 PLIN4Q96Q06 1357 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 ARHGAP32A7KAX9 2087 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 MUC6Q6W4X9 2439 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 ATG2AQ2TAZ0 1938 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 TEP1Q99973 2627 aaKnown RBP1.09□□□□□ -2.23
RTF1-207ENST00000561076 TTC28Q96AY4 2481 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 BCORQ6W2J9 1755 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 SCN11AQ9UI33 1791 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 FASNP49327 2511 aaKnown RBP1.09□□□□□ -2.23
RTF1-207ENST00000561076 RP1P56715 2156 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 SDK2Q58EX2 2172 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 MUC4Q99102 2169 aa1.09□□□□□ -2.23
RTF1-207ENST00000561076 CHD6Q8TD26 2715 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms