RNA–Protein interactions for RNA: ENST00000553360.5

KTN1-209, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 993 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-209ENST00000553360 COL1A1P02452 1464 aaPredicted RBP1.33□□□□□ -2.2
KTN1-209ENST00000553360 NKTRP30414 1462 aaKnown RBP1.33□□□□□ -2.2
KTN1-209ENST00000553360 MALRD1Q5VYJ5 2156 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 POLR1AO95602 1720 aaPredicted RBP1.33□□□□□ -2.2
KTN1-209ENST00000553360 COL24A1Q17RW2 1714 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 PEAK1Q9H792 1746 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 TCRBV4S1A1TA0A5B7 111 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 F2Z2F3 143 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 H3BPC8 53 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 H7BZZ5 65 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 LEPROTO15243 131 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 GNRH2O43555 120 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 HCRTO43612 131 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 CXCL8P10145 99 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 CCL5P13501 91 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 ATP5EP56381 51 aaPredicted RBP1.33□□□□□ -2.2
KTN1-209ENST00000553360 RBM3P98179 157 aaKnown RBP1.33□□□□□ -2.2
KTN1-209ENST00000553360 CIRBPQ14011 172 aaKnown RBP1.33□□□□□ -2.2
KTN1-209ENST00000553360 C12orf73Q69YU5 71 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 DEFB119Q8N690 84 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 FAM216BQ8N7L0 139 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 SPTSSAQ969W0 71 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 TAS2R4Q9NYW5 299 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 EFCAB6Q5THR3 1501 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 ASXL1Q8IXJ9 1541 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 CFAP74Q9C0B2 1584 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 CC2D2AQ9P2K1 1620 aa1.33□□□□□ -2.2
KTN1-209ENST00000553360 CFAP43Q8NDM7 1665 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 NUP188Q5SRE5 1749 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 NWD2Q9ULI1 1742 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 NFAT5O94916 1531 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 DLC1Q96QB1 1528 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 KIAA0586Q9BVV6 1533 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 TRAV13-2A0A0B4J235 113 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 NPYP01303 97 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 PIRTP0C851 137 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 PIPP12273 146 aaPredicted RBP1.32□□□□□ -2.2
KTN1-209ENST00000553360 XCL1P47992 114 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 UBE2D3P61077 147 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 UBE2D2P62837 147 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 RHOHQ15669 191 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 ZNF56Q15929 161 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 ZNF791Q3KP31 576 aaPredicted RBP1.32□□□□□ -2.2
KTN1-209ENST00000553360 ASB16-AS1Q495Z4 193 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.32□□□□□ -2.2
KTN1-209ENST00000553360 TMEM170BQ5T4T1 132 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 NCBP2-AS2Q69YL0 99 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 SOSTDC1Q6X4U4 206 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 ZNF563Q8TA94 476 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 PPP1R1CQ8WVI7 109 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 FAM103A1Q9BTL3 118 aaKnown RBP1.32□□□□□ -2.2
KTN1-209ENST00000553360 MRPL35Q9NZE8 188 aaKnown RBP1.32□□□□□ -2.2
KTN1-209ENST00000553360 HILPDAQ9Y5L2 63 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 ARL2-SNX15V9GYD0 113 aa1.32□□□□□ -2.2
KTN1-209ENST00000553360 ARHGEF28Q8N1W1 1705 aaKnown RBP1.32□□□□□ -2.2
KTN1-209ENST00000553360 FLG2Q5D862 2391 aaPredicted RBP1.32□□□□□ -2.2
KTN1-209ENST00000553360 PXDNQ92626 1479 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 KIAA1549LQ6ZVL6 1849 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 INTS1Q8N201 2190 aaKnown RBP1.31□□□□□ -2.2
KTN1-209ENST00000553360 AGLP35573 1532 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 KCPQ6ZWJ8 1503 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 UBR3Q6ZT12 1888 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 TIAM1Q13009 1591 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 PTPRSQ13332 1948 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 NWD1Q149M9 1564 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 IGHV1-24A0A0C4DH33 117 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 MYMXA0A1B0GTQ4 84 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 NDUFC1O43677 76 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 GCHFRP30047 84 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 FXYD2P54710 66 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 C6orf201Q7Z4U5 140 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 FAM223AQ8IWN6 122 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 LINC00269Q8N2A0 174 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 SMIM4Q8WVI0 70 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 CHCHD1Q96BP2 118 aaKnown RBP1.31□□□□□ -2.2
KTN1-209ENST00000553360 NMES1Q9C002 83 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 BPESC1Q9GZL8 116 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 FREM1Q5H8C1 2179 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 MED12Q93074 2177 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 ARFGEF1Q9Y6D6 1849 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 MGAMO43451 1857 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 CPAMD8Q8IZJ3 1885 aa1.31□□□□□ -2.2
KTN1-209ENST00000553360 EHBP1L1Q8N3D4 1523 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 ARHGEF5Q12774 1597 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 NESP48681 1621 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 MYO3AQ8NEV4 1616 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 CLTCQ00610 1675 aaKnown RBP1.3□□□□□ -2.2
KTN1-209ENST00000553360 COL4A6Q14031 1691 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 PREX1Q8TCU6 1659 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 LAMB1P07942 1786 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 TRBV7-1A0A0A6YYK4 115 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 IGHV3-15A0A0B4J1V0 119 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 TRAV3A0A0B4J244 114 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 FAM223BA6NKX1 122 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 B4DSR2 109 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 C10orf142B7Z368 130 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 IGLV1-51P01701 117 aa1.3□□□□□ -2.2
KTN1-209ENST00000553360 SAA1P0DJI8 122 aaPredicted RBP1.3□□□□□ -2.2
KTN1-209ENST00000553360 RPL27AP46776 148 aaKnown RBP1.3□□□□□ -2.2
KTN1-209ENST00000553360 CAV3P56539 151 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms