RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 HIGD1BQ9P298 99 aa12.42□□□□□ -0.42
SCAF8-201ENST00000367178 KIAA1549Q9HCM3 1950 aa12.42□□□□□ -0.42
SCAF8-201ENST00000367178 PTPRSQ13332 1948 aa12.42□□□□□ -0.42
SCAF8-201ENST00000367178 P0DMU3 169 aa12.42□□□□□ -0.42
SCAF8-201ENST00000367178 FAM231AP0DMU4 169 aa12.42□□□□□ -0.42
SCAF8-201ENST00000367178 FAM231CP0DMU5 169 aa12.42□□□□□ -0.42
SCAF8-201ENST00000367178 FXYD2P54710 66 aa12.42□□□□□ -0.42
SCAF8-201ENST00000367178 ARHGAP32A7KAX9 2087 aa12.42□□□□□ -0.42
SCAF8-201ENST00000367178 H0YGX0 51 aa12.42□□□□□ -0.42
SCAF8-201ENST00000367178 CEMP1Q6PRD7 247 aaPredicted RBP12.42□□□□□ -0.42
SCAF8-201ENST00000367178 USP9YO00507 2555 aaPredicted RBP12.41□□□□□ -0.42
SCAF8-201ENST00000367178 CXCL5P42830 114 aa12.41□□□□□ -0.42
SCAF8-201ENST00000367178 TIRAPP58753 221 aa12.41□□□□□ -0.42
SCAF8-201ENST00000367178 GDF5OSQ5U4N7 250 aa12.41□□□□□ -0.42
SCAF8-201ENST00000367178 FAM222AQ5U5X8 452 aa12.41□□□□□ -0.42
SCAF8-201ENST00000367178 MBD6Q96DN6 1003 aa12.41□□□□□ -0.42
SCAF8-201ENST00000367178 TM2D2Q9BX73 214 aa12.41□□□□□ -0.42
SCAF8-201ENST00000367178 PSMG3-AS1Q96PY0 264 aa12.4□□□□□ -0.42
SCAF8-201ENST00000367178 Q6ZUT4 128 aa12.4□□□□□ -0.42
SCAF8-201ENST00000367178 IGHV1-58A0A0C4DH39 117 aa12.4□□□□□ -0.42
SCAF8-201ENST00000367178 PSMB8P28062 276 aa12.4□□□□□ -0.42
SCAF8-201ENST00000367178 SS18L2Q9UHA2 77 aa12.4□□□□□ -0.42
SCAF8-201ENST00000367178 ZFAND2AQ8N6M9 145 aa12.39□□□□□ -0.43
SCAF8-201ENST00000367178 KLK5Q9Y337 293 aaPredicted RBP12.39□□□□□ -0.43
SCAF8-201ENST00000367178 C11orf45Q8TAV5 145 aa12.39□□□□□ -0.43
SCAF8-201ENST00000367178 TRAV26-1A0A087WT03 109 aa12.39□□□□□ -0.43
SCAF8-201ENST00000367178 ZNF702PQ9H963 129 aa12.39□□□□□ -0.43
SCAF8-201ENST00000367178 SPTBN4Q9H254 2564 aa12.39□□□□□ -0.43
SCAF8-201ENST00000367178 SMIM9A6NGZ8 99 aa12.39□□□□□ -0.43
SCAF8-201ENST00000367178 LRP4O75096 1905 aa12.38□□□□□ -0.43
SCAF8-201ENST00000367178 TANC2Q9HCD6 1990 aa12.38□□□□□ -0.43
SCAF8-201ENST00000367178 SETD2Q9BYW2 2564 aaPredicted RBP12.38□□□□□ -0.43
SCAF8-201ENST00000367178 LY6G6DO95868 133 aa12.38□□□□□ -0.43
SCAF8-201ENST00000367178 C15orf53Q8NAA6 179 aa12.37□□□□□ -0.43
SCAF8-201ENST00000367178 SPATA12Q7Z6I5 190 aa12.37□□□□□ -0.43
SCAF8-201ENST00000367178 MIR7-3HGQ8N6C7 128 aa12.37□□□□□ -0.43
SCAF8-201ENST00000367178 CRIP1P50238 77 aa12.36□□□□□ -0.43
SCAF8-201ENST00000367178 ANKRD29Q8N6D5 301 aa12.36□□□□□ -0.43
SCAF8-201ENST00000367178 LINC01006Q8NI28 216 aa12.36□□□□□ -0.43
SCAF8-201ENST00000367178 LYRM9A8MSI8 78 aa12.36□□□□□ -0.43
SCAF8-201ENST00000367178 hADV29S1A0JD25 119 aa12.36□□□□□ -0.43
SCAF8-201ENST00000367178 HCFC1P51610 2035 aa12.35□□□□□ -0.43
SCAF8-201ENST00000367178 HIST2H2BDQ6DRA6 164 aa12.35□□□□□ -0.43
SCAF8-201ENST00000367178 SHISA2Q6UWI4 295 aa12.35□□□□□ -0.43
SCAF8-201ENST00000367178 LINC00482Q8N8I6 264 aa12.35□□□□□ -0.43
SCAF8-201ENST00000367178 TAX1BP3O14907 124 aa12.34□□□□□ -0.43
SCAF8-201ENST00000367178 CRYBA4P53673 196 aa12.34□□□□□ -0.43
SCAF8-201ENST00000367178 Q6ZS46 218 aa12.34□□□□□ -0.43
SCAF8-201ENST00000367178 SMIM20Q8N5G0 67 aa12.34□□□□□ -0.43
SCAF8-201ENST00000367178 NCR3O14931 201 aa12.33□□□□□ -0.44
SCAF8-201ENST00000367178 LINC01620Q4KN68 170 aa12.33□□□□□ -0.44
SCAF8-201ENST00000367178 FUSP35637 526 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCAF8-201ENST00000367178 RS1O15537 224 aa12.32□□□□□ -0.44
SCAF8-201ENST00000367178 WFDC2Q14508 124 aa12.32□□□□□ -0.44
SCAF8-201ENST00000367178 LINC00269Q8N2A0 174 aa12.32□□□□□ -0.44
SCAF8-201ENST00000367178 LINC00467Q9BRT7 94 aa12.31□□□□□ -0.44
SCAF8-201ENST00000367178 SPANXDQ9BXN6 97 aa12.31□□□□□ -0.44
SCAF8-201ENST00000367178 AVPP01185 164 aa12.31□□□□□ -0.44
SCAF8-201ENST00000367178 IGLV1-40P01703 118 aa12.31□□□□□ -0.44
SCAF8-201ENST00000367178 IGLV2-11P01706 119 aa12.31□□□□□ -0.44
SCAF8-201ENST00000367178 TRACP01848 142 aa12.31□□□□□ -0.44
SCAF8-201ENST00000367178 HILS1P60008 231 aa12.31□□□□□ -0.44
SCAF8-201ENST00000367178 FN1P02751 2386 aaKnown RBP12.31□□□□□ -0.44
SCAF8-201ENST00000367178 REG3AQ06141 175 aa12.3□□□□□ -0.44
SCAF8-201ENST00000367178 LECT2O14960 151 aa12.3□□□□□ -0.44
SCAF8-201ENST00000367178 NEXN-AS1Q8NBZ9 246 aa12.3□□□□□ -0.44
SCAF8-201ENST00000367178 IL17DQ8TAD2 202 aa12.3□□□□□ -0.44
SCAF8-201ENST00000367178 CFAP126Q5VTH2 177 aa12.3□□□□□ -0.44
SCAF8-201ENST00000367178 DEFB131BA0A096LNP1 70 aa12.29□□□□□ -0.44
SCAF8-201ENST00000367178 M0QY20 66 aa12.29□□□□□ -0.44
SCAF8-201ENST00000367178 PLA2G2AP14555 144 aa12.29□□□□□ -0.44
SCAF8-201ENST00000367178 MIFP14174 115 aa12.29□□□□□ -0.44
SCAF8-201ENST00000367178 C18orf65Q6ZTR6 163 aa12.29□□□□□ -0.44
SCAF8-201ENST00000367178 HIGD2BQ4VC39 106 aa12.28□□□□□ -0.44
SCAF8-201ENST00000367178 FAM110AQ9BQ89 295 aa12.28□□□□□ -0.44
SCAF8-201ENST00000367178 ACYP1P07311 99 aa12.28□□□□□ -0.44
SCAF8-201ENST00000367178 NFE4Q86UQ8 179 aa12.28□□□□□ -0.44
SCAF8-201ENST00000367178 DIRC1Q969H9 104 aa12.28□□□□□ -0.44
SCAF8-201ENST00000367178 CDKN2A-AS1Q9UH64 79 aa12.28□□□□□ -0.44
SCAF8-201ENST00000367178 UBE2AP49459 152 aa12.27□□□□□ -0.44
SCAF8-201ENST00000367178 KRTAP10-9P60411 292 aa12.27□□□□□ -0.45
SCAF8-201ENST00000367178 TEN1Q86WV5 123 aa12.27□□□□□ -0.45
SCAF8-201ENST00000367178 SPATA25Q9BR10 227 aa12.27□□□□□ -0.45
SCAF8-201ENST00000367178 IGLV4-3A0A075B6K6 122 aa12.26□□□□□ -0.45
SCAF8-201ENST00000367178 MIAQ16674 131 aa12.26□□□□□ -0.45
SCAF8-201ENST00000367178 RNF185Q96GF1 192 aa12.26□□□□□ -0.45
SCAF8-201ENST00000367178 TRBV6-4A0A1B0GX49 114 aa12.26□□□□□ -0.45
SCAF8-201ENST00000367178 A0A0J9YXY3 114 aa12.25□□□□□ -0.45
SCAF8-201ENST00000367178 A0A1W2PPR1 153 aa12.25□□□□□ -0.45
SCAF8-201ENST00000367178 CHCHD10Q8WYQ3 142 aaPredicted RBP12.25□□□□□ -0.45
SCAF8-201ENST00000367178 CLEC2BQ92478 149 aa12.25□□□□□ -0.45
SCAF8-201ENST00000367178 PROK1P58294 105 aa12.25□□□□□ -0.45
SCAF8-201ENST00000367178 ZNF462Q96JM2 2506 aa12.25□□□□□ -0.45
SCAF8-201ENST00000367178 IGHV4-28A0A0C4DH34 117 aa12.24□□□□□ -0.45
SCAF8-201ENST00000367178 H7C423 109 aa12.24□□□□□ -0.45
SCAF8-201ENST00000367178 PRR9Q5T870 116 aa12.24□□□□□ -0.45
SCAF8-201ENST00000367178 RNASE3P12724 160 aaKnown RBP12.24□□□□□ -0.45
SCAF8-201ENST00000367178 UFSP1Q6NVU6 142 aa12.24□□□□□ -0.45
SCAF8-201ENST00000367178 WFDC10AQ9H1F0 79 aa12.24□□□□□ -0.45
SCAF8-201ENST00000367178 TRBV6-8A0A0A6YYG3 113 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms