RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 RPL28P46779 137 aaKnown RBP4.39□□□□□ -1.71
RFC1-201ENST00000349703 C9orf106Q8NAJ2 232 aa4.39□□□□□ -1.71
RFC1-201ENST00000349703 EXPH5Q8NEV8 1989 aa4.39□□□□□ -1.71
RFC1-201ENST00000349703 TRBV7-3A0A075B6L6 115 aa4.39□□□□□ -1.71
RFC1-201ENST00000349703 TRBV10-2A0A0K0K1G8 114 aa4.39□□□□□ -1.71
RFC1-201ENST00000349703 CGB3P0DN86 165 aa4.39□□□□□ -1.71
RFC1-201ENST00000349703 CGB7P0DN87 165 aa4.39□□□□□ -1.71
RFC1-201ENST00000349703 RTTNQ86VV8 2226 aa4.39□□□□□ -1.71
RFC1-201ENST00000349703 ASCC3Q8N3C0 2202 aaKnown RBP4.39□□□□□ -1.71
RFC1-201ENST00000349703 C2orf16Q68DN1 1984 aa4.39□□□□□ -1.71
RFC1-201ENST00000349703 ZNF73O43830 326 aaPredicted RBP4.39□□□□□ -1.71
RFC1-201ENST00000349703 EFNA4P52798 201 aa4.39□□□□□ -1.71
RFC1-201ENST00000349703 IGHV7-4-1A0A0J9YVY3 117 aa4.38□□□□□ -1.71
RFC1-201ENST00000349703 P0DMU3 169 aa4.38□□□□□ -1.71
RFC1-201ENST00000349703 FAM231AP0DMU4 169 aa4.38□□□□□ -1.71
RFC1-201ENST00000349703 FAM231CP0DMU5 169 aa4.38□□□□□ -1.71
RFC1-201ENST00000349703 CHKB-CPT1BH3BT56 60 aa4.38□□□□□ -1.71
RFC1-201ENST00000349703 I3L2K1 104 aa4.38□□□□□ -1.71
RFC1-201ENST00000349703 IGLV2-23P01705 113 aa4.38□□□□□ -1.71
RFC1-201ENST00000349703 ZFP36P26651 326 aaKnown RBP4.38□□□□□ -1.71
RFC1-201ENST00000349703 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.38□□□□□ -1.71
RFC1-201ENST00000349703 U3KQA8 63 aa4.38□□□□□ -1.71
RFC1-201ENST00000349703 INSL3P51460 131 aa4.38□□□□□ -1.71
RFC1-201ENST00000349703 ATP5EP56381 51 aaPredicted RBP4.38□□□□□ -1.71
RFC1-201ENST00000349703 PROK1P58294 105 aa4.38□□□□□ -1.71
RFC1-201ENST00000349703 IGLV3-9A0A075B6K5 115 aa4.37□□□□□ -1.71
RFC1-201ENST00000349703 BUB1B-PAK6H3BSN5 160 aa4.37□□□□□ -1.71
RFC1-201ENST00000349703 NCKAP5O14513 1909 aa4.37□□□□□ -1.71
RFC1-201ENST00000349703 A0A096LNJ9 63 aa4.37□□□□□ -1.71
RFC1-201ENST00000349703 CRIP2P52943 208 aaPredicted RBP4.37□□□□□ -1.71
RFC1-201ENST00000349703 LENEPQ9Y5L5 61 aa4.37□□□□□ -1.71
RFC1-201ENST00000349703 TRAV12-2A0A075B6T6 113 aa4.37□□□□□ -1.71
RFC1-201ENST00000349703 LINC01546A6NGU7 62 aa4.37□□□□□ -1.71
RFC1-201ENST00000349703 C14orf177Q52M58 125 aa4.37□□□□□ -1.71
RFC1-201ENST00000349703 WFDC9Q8NEX5 89 aa4.37□□□□□ -1.71
RFC1-201ENST00000349703 CACNA1DQ01668 2161 aa4.37□□□□□ -1.71
RFC1-201ENST00000349703 DYNAPQ8N1N2 210 aa4.37□□□□□ -1.71
RFC1-201ENST00000349703 IGFBPL1Q8WX77 278 aa4.37□□□□□ -1.71
RFC1-201ENST00000349703 CARD19Q96LW7 228 aa4.37□□□□□ -1.71
RFC1-201ENST00000349703 MRPL36Q9P0J6 103 aaKnown RBP4.37□□□□□ -1.71
RFC1-201ENST00000349703 ZNF883P0CG24 379 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 TSPEAR-AS2P59090 65 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 OOSP1A8MZH6 123 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 UBE2D3P61077 147 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 UBE2D2P62837 147 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 LY6EQ16553 131 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 LPAL2Q16609 132 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 RNF185Q96GF1 192 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 PTPRSQ13332 1948 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 BAALC-AS2P0C853 105 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 PIP4P1Q86T03 277 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 NEXN-AS1Q8NBZ9 246 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 CNFNQ9BYD5 112 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 S4R3C0 116 aa4.36□□□□□ -1.71
RFC1-201ENST00000349703 DEFB109BQ30KR1 87 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 NUPR2A6NF83 97 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 CCDC179H3BU77 68 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 IGHV3-23P01764 117 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 IGHG2P01859 326 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 ESPL1Q14674 2120 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 MYO9BQ13459 2157 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 IGHV1-58A0A0C4DH39 117 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 GAS8-AS1O95177 125 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 RNASE4P34096 147 aaKnown RBP4.35□□□□□ -1.71
RFC1-201ENST00000349703 CRIP1P50238 77 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 UBE2D1P51668 147 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 SPATA3Q8NHX4 192 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 FSTL3O95633 263 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 RHOHQ15669 191 aa4.35□□□□□ -1.71
RFC1-201ENST00000349703 USF3Q68DE3 2245 aa4.34□□□□□ -1.71
RFC1-201ENST00000349703 E7EUB6 86 aa4.34□□□□□ -1.71
RFC1-201ENST00000349703 K7EIM0 57 aa4.34□□□□□ -1.71
RFC1-201ENST00000349703 C3orf22Q8N5N4 141 aa4.34□□□□□ -1.71
RFC1-201ENST00000349703 ORMDL1Q9P0S3 153 aa4.34□□□□□ -1.71
RFC1-201ENST00000349703 TRAV13-2A0A0B4J235 113 aa4.34□□□□□ -1.71
RFC1-201ENST00000349703 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
RFC1-201ENST00000349703 TRBV7-1A0A0A6YYK4 115 aa4.34□□□□□ -1.71
RFC1-201ENST00000349703 A0A1B0GX51 115 aa4.34□□□□□ -1.71
RFC1-201ENST00000349703 IGFL4Q6B9Z1 124 aa4.34□□□□□ -1.71
RFC1-201ENST00000349703 LINC00643Q86TS7 51 aa4.34□□□□□ -1.71
RFC1-201ENST00000349703 KAAG1Q9UBP8 84 aa4.34□□□□□ -1.71
RFC1-201ENST00000349703 TRGV2A0A075B6R0 118 aa4.34□□□□□ -1.72
RFC1-201ENST00000349703 TRBV27A0A0K0K1C4 114 aa4.34□□□□□ -1.72
RFC1-201ENST00000349703 B9D2Q9BPU9 175 aa4.34□□□□□ -1.72
RFC1-201ENST00000349703 UPK3BQ9BT76 320 aa4.34□□□□□ -1.72
RFC1-201ENST00000349703 A0A0J9YY99 117 aa4.33□□□□□ -1.72
RFC1-201ENST00000349703 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
RFC1-201ENST00000349703 FAM104AQ969W3 186 aa4.33□□□□□ -1.72
RFC1-201ENST00000349703 FAM218AQ96MZ4 157 aa4.33□□□□□ -1.72
RFC1-201ENST00000349703 TRBV30A0A0K0K1B3 111 aa4.33□□□□□ -1.72
RFC1-201ENST00000349703 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
RFC1-201ENST00000349703 KIAA1549Q9HCM3 1950 aa4.33□□□□□ -1.72
RFC1-201ENST00000349703 TRAV4A0A0B4J268 109 aa4.33□□□□□ -1.72
RFC1-201ENST00000349703 IGHV3-30P01768 117 aa4.33□□□□□ -1.72
RFC1-201ENST00000349703 IGHV3-30-5P0DP03 117 aa4.33□□□□□ -1.72
RFC1-201ENST00000349703 LINC01006Q8NI28 216 aa4.33□□□□□ -1.72
RFC1-201ENST00000349703 SERP1Q9Y6X1 66 aa4.33□□□□□ -1.72
RFC1-201ENST00000349703 M0R1W7 72 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 MINOS1Q5TGZ0 78 aa4.32□□□□□ -1.72
RFC1-201ENST00000349703 HCFC1P51610 2035 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms