RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 GFRA4Q9GZZ7 299 aa10.11□□□□□ -0.79
PPFIA1-216ENST00000530746 MSRB1Q9NZV6 116 aa10.11□□□□□ -0.79
PPFIA1-216ENST00000530746 TRBV7-3A0A075B6L6 115 aa10.1□□□□□ -0.79
PPFIA1-216ENST00000530746 A0A087WWC5 75 aa10.1□□□□□ -0.79
PPFIA1-216ENST00000530746 SMIM17P0DL12 118 aa10.1□□□□□ -0.79
PPFIA1-216ENST00000530746 RPL36AP83881 106 aaKnown RBP10.1□□□□□ -0.79
PPFIA1-216ENST00000530746 TSKUQ8WUA8 353 aa10.1□□□□□ -0.79
PPFIA1-216ENST00000530746 RPL36ALQ969Q0 106 aaKnown RBP10.1□□□□□ -0.79
PPFIA1-216ENST00000530746 KIF25-AS1Q9Y6Z4 181 aa10.1□□□□□ -0.79
PPFIA1-216ENST00000530746 F5H697 171 aa10.09□□□□□ -0.79
PPFIA1-216ENST00000530746 MT-ND4LP03901 98 aa10.09□□□□□ -0.79
PPFIA1-216ENST00000530746 FOXA3P55318 350 aaPredicted RBP10.09□□□□□ -0.79
PPFIA1-216ENST00000530746 IGHV3-30P01768 117 aa10.08□□□□□ -0.8
PPFIA1-216ENST00000530746 IGHV3-33P01772 117 aa10.08□□□□□ -0.8
PPFIA1-216ENST00000530746 IGHV3-30-3P0DP02 117 aa10.08□□□□□ -0.8
PPFIA1-216ENST00000530746 IGHV3-30-5P0DP03 117 aa10.08□□□□□ -0.8
PPFIA1-216ENST00000530746 CTRLP40313 264 aa10.08□□□□□ -0.8
PPFIA1-216ENST00000530746 UBE2D3P61077 147 aa10.08□□□□□ -0.8
PPFIA1-216ENST00000530746 UBE2D2P62837 147 aa10.08□□□□□ -0.8
PPFIA1-216ENST00000530746 LYZL1Q6UWQ5 148 aa10.08□□□□□ -0.8
PPFIA1-216ENST00000530746 BORCS7Q96B45 105 aa10.08□□□□□ -0.8
PPFIA1-216ENST00000530746 ANAPC16Q96DE5 110 aa10.08□□□□□ -0.8
PPFIA1-216ENST00000530746 V9GYV3 84 aa10.08□□□□□ -0.8
PPFIA1-216ENST00000530746 HERC2O95714 4834 aa10.07□□□□□ -0.8
PPFIA1-216ENST00000530746 IBA57-AS1B1ANH7 110 aa10.07□□□□□ -0.8
PPFIA1-216ENST00000530746 ADCYAP1P18509 176 aa10.07□□□□□ -0.8
PPFIA1-216ENST00000530746 C10orf91Q5T1B1 145 aa10.07□□□□□ -0.8
PPFIA1-216ENST00000530746 NEXN-AS1Q8NBZ9 246 aa10.07□□□□□ -0.8
PPFIA1-216ENST00000530746 CNFNQ9BYD5 112 aa10.07□□□□□ -0.8
PPFIA1-216ENST00000530746 CARHSP1Q9Y2V2 147 aaKnown RBP10.07□□□□□ -0.8
PPFIA1-216ENST00000530746 NTF3P20783 257 aa10.06□□□□□ -0.8
PPFIA1-216ENST00000530746 SPATA12Q7Z6I5 190 aa10.06□□□□□ -0.8
PPFIA1-216ENST00000530746 GTSF1Q8WW33 167 aa10.06□□□□□ -0.8
PPFIA1-216ENST00000530746 NAT8BQ9UHF3 227 aa10.06□□□□□ -0.8
PPFIA1-216ENST00000530746 DNAH5Q8TE73 4624 aa10.06□□□□□ -0.8
PPFIA1-216ENST00000530746 LRP1BQ9NZR2 4599 aa10.06□□□□□ -0.8
PPFIA1-216ENST00000530746 HIGD1CA8MV81 97 aa10.05□□□□□ -0.8
PPFIA1-216ENST00000530746 C16orf90A8MZG2 172 aa10.05□□□□□ -0.8
PPFIA1-216ENST00000530746 TRGC1P0CF51 173 aa10.05□□□□□ -0.8
PPFIA1-216ENST00000530746 CTDSP1Q9GZU7 261 aa10.05□□□□□ -0.8
PPFIA1-216ENST00000530746 SMIM27A0A1W2PRY6 76 aa10.04□□□□□ -0.8
PPFIA1-216ENST00000530746 MGPP08493 103 aa10.04□□□□□ -0.8
PPFIA1-216ENST00000530746 LAGE3Q14657 143 aa10.04□□□□□ -0.8
PPFIA1-216ENST00000530746 SMIM15Q7Z3B0 74 aa10.04□□□□□ -0.8
PPFIA1-216ENST00000530746 Q8N3U1 123 aa10.04□□□□□ -0.8
PPFIA1-216ENST00000530746 A0A1B0GUT8 65 aa10.03□□□□□ -0.8
PPFIA1-216ENST00000530746 H7C1H1 209 aa10.03□□□□□ -0.8
PPFIA1-216ENST00000530746 M0QY20 66 aa10.03□□□□□ -0.8
PPFIA1-216ENST00000530746 EREGO14944 169 aa10.03□□□□□ -0.8
PPFIA1-216ENST00000530746 KRTAP10-2P60368 255 aa10.03□□□□□ -0.8
PPFIA1-216ENST00000530746 NIT1Q86X76 327 aa10.03□□□□□ -0.8
PPFIA1-216ENST00000530746 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.03□□□□□ -0.8
PPFIA1-216ENST00000530746 PGLYRP4Q96LB8 373 aa10.03□□□□□ -0.8
PPFIA1-216ENST00000530746 DPH3P1Q9H4G8 78 aa10.03□□□□□ -0.8
PPFIA1-216ENST00000530746 Q9HAA7 133 aa10.03□□□□□ -0.8
PPFIA1-216ENST00000530746 URGCP-MRPS24S4R325 110 aa10.03□□□□□ -0.8
PPFIA1-216ENST00000530746 TRBV6-8A0A0A6YYG3 113 aa10.02□□□□□ -0.81
PPFIA1-216ENST00000530746 RIGQ13278 110 aa10.02□□□□□ -0.81
PPFIA1-216ENST00000530746 RHEBQ15382 184 aa10.02□□□□□ -0.81
PPFIA1-216ENST00000530746 TWIST1Q15672 202 aa10.02□□□□□ -0.81
PPFIA1-216ENST00000530746 SUMO4Q6EEV6 95 aa10.02□□□□□ -0.81
PPFIA1-216ENST00000530746 DAZ4Q86SG3 579 aaKnown RBP10.02□□□□□ -0.81
PPFIA1-216ENST00000530746 SVBPQ8N300 66 aa10.02□□□□□ -0.81
PPFIA1-216ENST00000530746 IMMP2LQ96T52 175 aa10.02□□□□□ -0.81
PPFIA1-216ENST00000530746 DAZ3Q9NR90 486 aaKnown RBP10.02□□□□□ -0.81
PPFIA1-216ENST00000530746 TMEM242Q9NWH2 141 aa10.02□□□□□ -0.81
PPFIA1-216ENST00000530746 A0A087WTM6 91 aa10.01□□□□□ -0.81
PPFIA1-216ENST00000530746 A0A1B0GW15 77 aa10.01□□□□□ -0.81
PPFIA1-216ENST00000530746 PSCAO43653 123 aa10.01□□□□□ -0.81
PPFIA1-216ENST00000530746 SNAPINO95295 136 aa10.01□□□□□ -0.81
PPFIA1-216ENST00000530746 NUP35Q8NFH5 326 aa10.01□□□□□ -0.81
PPFIA1-216ENST00000530746 DNAJC30Q96LL9 226 aa10.01□□□□□ -0.81
PPFIA1-216ENST00000530746 RYR1P21817 5038 aa10□□□□□ -0.81
PPFIA1-216ENST00000530746 APOC3P02656 99 aa10□□□□□ -0.81
PPFIA1-216ENST00000530746 S100A8P05109 93 aa10□□□□□ -0.81
PPFIA1-216ENST00000530746 TMEM97Q5BJF2 176 aa10□□□□□ -0.81
PPFIA1-216ENST00000530746 CLRN3Q8NCR9 226 aa10□□□□□ -0.81
PPFIA1-216ENST00000530746 CHCHD7Q9BUK0 85 aa10□□□□□ -0.81
PPFIA1-216ENST00000530746 A0A087WX48 190 aa9.99□□□□□ -0.81
PPFIA1-216ENST00000530746 TRAV8-3A0A0A6YYJ7 113 aa9.99□□□□□ -0.81
PPFIA1-216ENST00000530746 KCNIP4Q6PIL6 250 aa9.99□□□□□ -0.81
PPFIA1-216ENST00000530746 RASL11AQ6T310 242 aa9.99□□□□□ -0.81
PPFIA1-216ENST00000530746 SLC7A5P1Q8MH63 180 aa9.99□□□□□ -0.81
PPFIA1-216ENST00000530746 PGPEP1Q9NXJ5 209 aa9.99□□□□□ -0.81
PPFIA1-216ENST00000530746 C7orf77A4D0Y5 90 aa9.98□□□□□ -0.81
PPFIA1-216ENST00000530746 NTM-AS1Q6ZSK4 140 aa9.98□□□□□ -0.81
PPFIA1-216ENST00000530746 ATP5L2Q7Z4Y8 100 aa9.98□□□□□ -0.81
PPFIA1-216ENST00000530746 FRZBQ92765 325 aa9.98□□□□□ -0.81
PPFIA1-216ENST00000530746 TM2D2Q9BX73 214 aa9.98□□□□□ -0.81
PPFIA1-216ENST00000530746 NIT2Q9NQR4 276 aa9.98□□□□□ -0.81
PPFIA1-216ENST00000530746 HSPG2P98160 4391 aa9.98□□□□□ -0.81
PPFIA1-216ENST00000530746 APOBP04114 4563 aaKnown RBP9.98□□□□□ -0.81
PPFIA1-216ENST00000530746 TRAV9-1A0A075B6T8 112 aa9.97□□□□□ -0.81
PPFIA1-216ENST00000530746 LRCOL1A6NCL2 159 aa9.97□□□□□ -0.81
PPFIA1-216ENST00000530746 TMEM262E9PQX1 116 aa9.97□□□□□ -0.81
PPFIA1-216ENST00000530746 S100PP25815 95 aa9.97□□□□□ -0.81
PPFIA1-216ENST00000530746 ELOBQ15370 118 aa9.97□□□□□ -0.81
PPFIA1-216ENST00000530746 CDPF1Q6NVV7 123 aa9.97□□□□□ -0.81
PPFIA1-216ENST00000530746 KLK12Q9UKR0 248 aa9.97□□□□□ -0.81
PPFIA1-216ENST00000530746 TRBV25-1A0A075B6N4 114 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms