RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 RAPGEF6Q8TEU7 1601 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 RGPD2P0DJD1 1756 aa2.59□□□□□ -2
VPS8-224ENST00000488255 NFAT5O94916 1531 aa2.58□□□□□ -2
VPS8-224ENST00000488255 EFCAB6Q5THR3 1501 aa2.58□□□□□ -2
VPS8-224ENST00000488255 SAMD9Q5K651 1589 aa2.58□□□□□ -2
VPS8-224ENST00000488255 MCM3APO60318 1980 aa2.58□□□□□ -2
VPS8-224ENST00000488255 IGLV3-9A0A075B6K5 115 aa2.58□□□□□ -2
VPS8-224ENST00000488255 CXorf51AA0A1B0GTR3 108 aa2.58□□□□□ -2
VPS8-224ENST00000488255 HCG22E2RYF7 251 aa2.58□□□□□ -2
VPS8-224ENST00000488255 E7EUB6 86 aa2.58□□□□□ -2
VPS8-224ENST00000488255 LEPROTL1O95214 131 aa2.58□□□□□ -2
VPS8-224ENST00000488255 PPP1R17O96001 155 aa2.58□□□□□ -2
VPS8-224ENST00000488255 IGKV1-17P01599 117 aa2.58□□□□□ -2
VPS8-224ENST00000488255 SYCNQ0VAF6 134 aa2.58□□□□□ -2
VPS8-224ENST00000488255 IGFL1Q6UW32 110 aa2.58□□□□□ -2
VPS8-224ENST00000488255 MIR7-3HGQ8N6C7 128 aa2.58□□□□□ -2
VPS8-224ENST00000488255 SPTSSBQ8NFR3 76 aa2.58□□□□□ -2
VPS8-224ENST00000488255 FAM103A1Q9BTL3 118 aaKnown RBP2.58□□□□□ -2
VPS8-224ENST00000488255 XRN1Q8IZH2 1706 aaKnown RBP2.58□□□□□ -2
VPS8-224ENST00000488255 NWD2Q9ULI1 1742 aa2.58□□□□□ -2
VPS8-224ENST00000488255 KIAA1671Q9BY89 1806 aa2.58□□□□□ -2
VPS8-224ENST00000488255 HELZP42694 1942 aaKnown RBP2.58□□□□□ -2
VPS8-224ENST00000488255 GLI2P10070 1586 aa2.57□□□□□ -2
VPS8-224ENST00000488255 VWDEQ8N2E2 1590 aa2.57□□□□□ -2
VPS8-224ENST00000488255 TNS1Q9HBL0 1735 aaKnown RBP2.57□□□□□ -2
VPS8-224ENST00000488255 AFDNP55196 1824 aaKnown RBP2.57□□□□□ -2
VPS8-224ENST00000488255 PDCD11Q14690 1871 aaKnown RBP2.57□□□□□ -2
VPS8-224ENST00000488255 A0A087WSZ3 146 aa2.57□□□□□ -2
VPS8-224ENST00000488255 H3BVH4 76 aa2.57□□□□□ -2
VPS8-224ENST00000488255 LECT2O14960 151 aa2.57□□□□□ -2
VPS8-224ENST00000488255 IGKV1D-33P01593 117 aa2.57□□□□□ -2
VPS8-224ENST00000488255 IGKV1-33P01594 117 aa2.57□□□□□ -2
VPS8-224ENST00000488255 IGHV3-53P01767 116 aa2.57□□□□□ -2
VPS8-224ENST00000488255 CMC4P56277 68 aaPredicted RBP2.57□□□□□ -2
VPS8-224ENST00000488255 UBE2D3P61077 147 aa2.57□□□□□ -2
VPS8-224ENST00000488255 UBE2D2P62837 147 aa2.57□□□□□ -2
VPS8-224ENST00000488255 Q6JHZ5 121 aa2.57□□□□□ -2
VPS8-224ENST00000488255 C2orf91Q6ZV80 131 aa2.57□□□□□ -2
VPS8-224ENST00000488255 LYPD1Q8N2G4 141 aa2.57□□□□□ -2
VPS8-224ENST00000488255 Q8N6K4 173 aa2.57□□□□□ -2
VPS8-224ENST00000488255 Q8N814 137 aa2.57□□□□□ -2
VPS8-224ENST00000488255 MUC7Q8TAX7 377 aa2.57□□□□□ -2
VPS8-224ENST00000488255 PPP1R1CQ8WVI7 109 aa2.57□□□□□ -2
VPS8-224ENST00000488255 FAM215AQ9Y5M1 114 aa2.57□□□□□ -2
VPS8-224ENST00000488255 ARHGEF5Q12774 1597 aa2.57□□□□□ -2
VPS8-224ENST00000488255 ADCY10Q96PN6 1610 aa2.57□□□□□ -2
VPS8-224ENST00000488255 MYO5AQ9Y4I1 1855 aaKnown RBP2.56□□□□□ -2
VPS8-224ENST00000488255 PTPRBP23467 1997 aa2.56□□□□□ -2
VPS8-224ENST00000488255 TANC2Q9HCD6 1990 aa2.56□□□□□ -2
VPS8-224ENST00000488255 TRPM6Q9BX84 2022 aa2.56□□□□□ -2
VPS8-224ENST00000488255 A0A1B0GVX0 72 aa2.56□□□□□ -2
VPS8-224ENST00000488255 TMEM14DPA8MWL7 114 aa2.56□□□□□ -2
VPS8-224ENST00000488255 A8MWP4 228 aa2.56□□□□□ -2
VPS8-224ENST00000488255 IGLV7-43P04211 117 aa2.56□□□□□ -2
VPS8-224ENST00000488255 SAA2P0DJI9 122 aaPredicted RBP2.56□□□□□ -2
VPS8-224ENST00000488255 MGST1P10620 155 aaKnown RBP2.56□□□□□ -2
VPS8-224ENST00000488255 EFNA4P52798 201 aa2.56□□□□□ -2
VPS8-224ENST00000488255 ELOF1P60002 83 aaKnown RBP2.56□□□□□ -2
VPS8-224ENST00000488255 C10orf128Q5T292 105 aa2.56□□□□□ -2
VPS8-224ENST00000488255 FAM74A4Q5TZK3 123 aa2.56□□□□□ -2
VPS8-224ENST00000488255 MRC1P22897 1456 aa2.56□□□□□ -2
VPS8-224ENST00000488255 NWD1Q149M9 1564 aa2.56□□□□□ -2
VPS8-224ENST00000488255 EIF2AK4Q9P2K8 1649 aaKnown RBP2.56□□□□□ -2
VPS8-224ENST00000488255 WIZO95785 1651 aa2.56□□□□□ -2
VPS8-224ENST00000488255 NYNRINQ9P2P1 1898 aaKnown RBP2.56□□□□□ -2
VPS8-224ENST00000488255 IGHV3-64A0A075B6Q5 118 aa2.55□□□□□ -2
VPS8-224ENST00000488255 MROH2AA6NES4 1674 aa2.55□□□□□ -2
VPS8-224ENST00000488255 HIGD1CA8MV81 97 aa2.55□□□□□ -2
VPS8-224ENST00000488255 MIFP14174 115 aa2.55□□□□□ -2
VPS8-224ENST00000488255 ROMO1P60602 79 aa2.55□□□□□ -2
VPS8-224ENST00000488255 MED12LQ86YW9 2145 aa2.55□□□□□ -2
VPS8-224ENST00000488255 C20orf197Q8N268 126 aa2.55□□□□□ -2
VPS8-224ENST00000488255 UBALD1Q8TB05 177 aa2.55□□□□□ -2
VPS8-224ENST00000488255 AMELXQ99217 191 aa2.55□□□□□ -2
VPS8-224ENST00000488255 IFT172Q9UG01 1749 aa2.55□□□□□ -2
VPS8-224ENST00000488255 C22orf24Q9Y442 160 aa2.55□□□□□ -2
VPS8-224ENST00000488255 NUMA1Q14980 2115 aa2.54□□□□□ -2
VPS8-224ENST00000488255 ANKRD12Q6UB98 2062 aa2.54□□□□□ -2
VPS8-224ENST00000488255 PLXNA1Q9UIW2 1896 aa2.54□□□□□ -2
VPS8-224ENST00000488255 MYOM1P52179 1685 aa2.54□□□□□ -2
VPS8-224ENST00000488255 ZNF142P52746 1687 aaPredicted RBP2.54□□□□□ -2
VPS8-224ENST00000488255 ABCA5Q8WWZ7 1642 aa2.54□□□□□ -2
VPS8-224ENST00000488255 IGHV1-18A0A0C4DH31 117 aa2.54□□□□□ -2
VPS8-224ENST00000488255 TMEM30CPA0ZSE6 113 aa2.54□□□□□ -2
VPS8-224ENST00000488255 C2orf70A6NJV1 201 aa2.54□□□□□ -2
VPS8-224ENST00000488255 IQCF6A8MYZ5 107 aa2.54□□□□□ -2
VPS8-224ENST00000488255 CHKB-CPT1BH3BT56 60 aa2.54□□□□□ -2
VPS8-224ENST00000488255 NDUFB1O75438 58 aa2.54□□□□□ -2
VPS8-224ENST00000488255 TRGV3P03979 118 aa2.54□□□□□ -2
VPS8-224ENST00000488255 Q8NDZ9 215 aa2.54□□□□□ -2
VPS8-224ENST00000488255 CMC2Q9NRP2 79 aa2.54□□□□□ -2
VPS8-224ENST00000488255 U3KQK5 164 aa2.54□□□□□ -2
VPS8-224ENST00000488255 ATAD5Q96QE3 1844 aa2.54□□□□□ -2
VPS8-224ENST00000488255 COL18A1P39060 1754 aa2.54□□□□□ -2
VPS8-224ENST00000488255 MAST2Q6P0Q8 1798 aa2.54□□□□□ -2
VPS8-224ENST00000488255 ROBO1Q9Y6N7 1651 aa2.53□□□□□ -2
VPS8-224ENST00000488255 ATP7AQ04656 1500 aa2.53□□□□□ -2
VPS8-224ENST00000488255 PTPRMP28827 1452 aa2.53□□□□□ -2
VPS8-224ENST00000488255 ZFC3H1O60293 1989 aaKnown RBP2.53□□□□□ -2
VPS8-224ENST00000488255 CASP8AP2Q9UKL3 1982 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms