RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Mbnl3Q8R003 342 aaKnown RBP12.37□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Defb6Q91VD6 63 aa12.37□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Tmem100Q9CQG9 134 aa12.37□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Alpk2Q91ZB0 2144 aa12.37□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Pglyrp3A1A547 347 aa12.37□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Spink2Q8BMY7 86 aa12.37□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Olfr1199Q8VF94 310 aa12.37□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 H2al3Q9D4U4 128 aa12.37□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Scn5aQ9JJV9 2019 aa12.37□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Ighv6-3A0A075B5T2 118 aa12.37□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Ighv7-3A0A075B5R2 120 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Tcrg-V6A0A075B5Y8 134 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Trav16nA0A075B634 117 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Trav16A0A075B653 116 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Gm10645Q3UPY1 145 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 5930422O12RikQ8C4Y4 123 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Olfr1258Q8VGN6 311 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Myoz1Q9JK37 296 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Ighv1-76A0A0G2JFE9 117 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Defb33Q30KN3 62 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Shisa3Q3UPR0 238 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 2200002J24RikQ9D807 110 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Erg28Q9ERY9 140 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 CompQ9R0G6 755 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Taf1Q80UV9 1891 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Sumo2P61957 95 aaKnown RBP12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Rnase2aQ8K196 155 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Gtf3aQ8VHT7 364 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Pnrc2Q9CR73 140 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Tmem89Q9DA04 169 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Cacna1aP97445 2368 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Gm20219A0A1B0GRQ3 87 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Atp5g2P56383 146 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Khdc1cQ4KL78 166 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Mbnl2Q8C181 373 aaKnown RBP12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Rnf125Q9D9R0 233 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Dctn5Q9QZB9 182 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Phlda3Q9WV95 125 aa12.36□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Tmem177Q8BPE4 311 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Trpm7Q923J1 1863 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Trav7n-5A0A075B604 112 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Vmn1r1E9PVR6 306 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Gm20878L7N244 103 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Wfdc21Q8BTE6 63 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 GlmpQ9JHJ3 404 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Trav3n-3A0A0G2JEM0 114 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Gm21983D6RFS9 131 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Efna2P52801 209 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 HrkP62816 92 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Wbp1P97764 304 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Olfr523Q8VFE7 317 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Iah1Q9DB29 249 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 1700067P10RikG3X8U2 183 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Olfr322Q5NCC8 327 aa12.35□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Iglv3A0A0B4J1K5 122 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Wdr83osQ6ZWX0 106 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Tmem91Q8C581 172 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Gm45871A0A1B0GRI9 540 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Sox15P43267 231 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Olfr491Q8VG06 310 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Higd1bQ99JY6 98 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Trav4-4-dv10A0A075B651 110 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Lcn2P11672 200 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Klhdc1Q80YG3 406 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Rbfox3Q8BIF2 374 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Wdr31Q9JHB4 367 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Hs3st3b1Q9QZS6 390 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Trdv2-1A0A0G2JGB9 116 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Cd81P35762 236 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Klf2Q60843 354 aaKnown RBP12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Dtx2Q8R3P2 619 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Siglec15A7E1W8 342 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 AponG3X9D6 251 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Lgals6O54891 301 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Tmem170aQ9D342 144 aa12.34□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 P18532 116 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Gm45717A0A1B0GT68 152 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Gm21974F6W3F3 119 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Rnf5O35445 180 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 P01723 117 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 PpyP10601 100 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Olfr1209Q3SXJ3 310 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 RetnQ99P87 114 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Reg4Q9D8G5 157 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Col4a3Q9QZS0 1669 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Ighv1-15A0A0A6YXA5 117 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Gm17732E9Q5I2 61 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Tmem95P0DJF3 176 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 NrepQ07475 68 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Cd200r1lQ6XJV6 249 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Fam117aQ7TNF9 451 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Scn10aQ6QIY3 1958 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Trav6d-3A0A075B6B3 112 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Trav13n-4A0A0G2JG01 110 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Trav6-3Q5R1E6 112 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Samd10Q7TST3 202 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Vmn1r70Q8R254 298 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Vmn1r216Q8R257 298 aa12.33□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Igkv4-91A0A075B5L2 119 aa12.32□□□□□ -0.44
Pcdh20-201ENSMUST00000061628 Ighv1-37A0A0A6YW32 117 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms