RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Srd5a2Q99N99 254 aa14.17□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Gm14443A2ARX0 610 aa14.16□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 RprmQ9JJ72 109 aa14.16□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Ighv1-67A0A0G2JFN9 117 aa14.16□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 P01667 111 aa14.16□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Slc17a3G3UWD9 498 aa14.16□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Vmn1r235Q8R297 328 aa14.16□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Trbv19A0A0B4J1H4 117 aa14.16□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Spink11Q09TK7 88 aa14.16□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Trav3-1Q5R1I8 114 aa14.16□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 F12Q80YC5 597 aa14.16□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Olfr968Q8VFN4 314 aa14.16□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Tmem196V9GX04 182 aa14.16□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Olfr559Q8VH14 318 aa14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Trav12d-1A0N8R0 115 aa14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Tet1Q3URK3 2007 aaKnown RBP14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 ApelaP0DMC4 54 aa14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 PpoxP51175 477 aa14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Erg28Q9ERY9 140 aa14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Trav6d-5A0A075B6B9 112 aa14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Gm17732E9Q5I2 61 aa14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Ccl4P14097 92 aa14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 GgnQ80WJ1 673 aa14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Ankrd66J3QNN4 192 aa14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 CxadrP97792 365 aa14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 SisF8VQM5 1818 aa14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 Zfand6Q9DCH6 223 aa14.15□□□□□ -0.14
Ccdc88a-201ENSMUST00000040182 PtcraP0C6B2 199 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Defa4P28311 92 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Pgpep1Q9ESW8 209 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Sh3bgrl3Q91VW3 93 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 GlmpQ9JHJ3 404 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Il17bQ9QXT6 180 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Ssc4dA1L0T3 586 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Defa-rs7P50715 91 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Plxna2P70207 1894 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Klk1b22P15948 259 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Tmem189Q99LQ7 271 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Tanc1Q0VGY8 1856 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Tnfsf12O54907 249 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Hcfc1r1Q9CYQ5 120 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Spcs1Q9D958 161 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Cd200r1Q9ES57 326 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 P01746 140 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Defb46Q4QY34 57 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Dusp14Q9JLY7 198 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Plppr1Q8BFZ2 325 aa14.14□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Ssbp4Q3U4B1 363 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Tspan13Q9D8C2 204 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Slurp1Q9Z0K7 110 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Rnf224Q3UIW8 156 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 OpalinQ7M750 143 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Prr15Q9D1T5 122 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Sdf2l1Q9ESP1 221 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Wrap73Q9JM98 462 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Fgf5P15656 264 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Igkv4-91A0A075B5L2 119 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Zfp976E9Q981 636 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Hint1P70349 126 aaKnown RBP14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Gm1673Q3UR78 90 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Hcfc2Q9D968 241 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Atxn7l2Q8C8K6 696 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 5530401A14RikQ9D3H9 131 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Fam219aQ9D772 157 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Trav16nA0A075B634 117 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Tcrg-V5A0A0G2JGV5 113 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Sox15P43267 231 aa14.13□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Spg11Q3UHA3 2430 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Khdc1cQ4KL78 166 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Bak1O08734 209 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 GzmbP04187 247 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Bricd5Q8BV89 174 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Rnf182Q8C432 247 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Zfp959Q91VM8 539 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Dctn5Q9QZB9 182 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Tac3P55099 116 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 C2cd4aE9Q861 334 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Tnfsf11O35235 316 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Cxcl10P17515 98 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Cmc4Q61908 68 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Olfr1381Q7TQT4 311 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Gm9920D3YVZ2 140 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Tctn3Q8R2Q6 595 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Sec11aQ9R0P6 179 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 AgmatA2AS89 358 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Rtn4rl2Q7M6Z0 420 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Ren2P00796 401 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Znf146Q8BQN6 292 aa14.12□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Brwd1Q921C3 2304 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Rp1l1Q8CGM2 1859 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Ighv5-16A0A0B4J1P4 117 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Irf2bp2E9Q1P8 570 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Olfr1367Q8VFG2 316 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Vwa8Q8CC88 1905 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Vmn1r1E9PVR6 306 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 LipiF6YQT7 476 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Adrb3P25962 400 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Igkv10-95A0A0G2JFY3 115 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Gm21882J3QN86 361 aa14.11□□□□□ -0.15
Ccdc88a-201ENSMUST00000040182 Cacng7P62956 275 aa14.11□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms