RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Zcchc10Q9CX48 178 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Slc25a15Q9WVD5 301 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Igkv19-93A0A0G2JFZ3 115 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Cldn34c3J3QJW5 233 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Cldn34c2J3QNM1 233 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 ApcsP12246 224 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Timp3P39876 211 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Spam1P48794 512 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Tctn2Q2MV57 700 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Patz1Q5NBY9 687 aaKnown RBP10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr58Q7TRF6 309 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gm5868Q8BJG1 145 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Cldn34c1Q8K193 234 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Vmn1r222Q8R269 308 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr1183Q8VFF8 303 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gm10130F6ZHM5 101 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 P01788 123 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Hoxa3P02831 443 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Pafah1b2Q61206 229 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 SnrpcQ62241 159 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Zfp420Q7TMN8 578 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Tmem167bQ80X45 74 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Ss18l1Q8BW22 402 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr984Q8VFN1 314 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Actl6bQ99MR0 426 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Lamp5Q9D387 280 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Rnf125Q9D9R0 233 aa10.6□□□□□ -0.71
Nup88-203ENSMUST00000108531 Trav8n-2A0A075B633 112 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr1024A2ASU7 327 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gm5218F6YH22 154 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 P01915 264 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 P04940 107 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 P04941 107 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Tmem52bQ0VBF2 186 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Ifna12Q80SS5 189 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gm4894Q8CA09 118 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Q8VC23 124 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr983Q8VG90 315 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Pbp2Q8VIN1 187 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Fam162bQ9CX19 157 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Ccl28Q9JIL2 130 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Nubp1Q9R060 320 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 CnmdQ9Z1F6 334 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 AU041133A0A0J9YVH3 498 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gm14124A2AU83 715 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gm14325A2AW67 498 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Tarm1B6A8R8 288 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Ren2P00796 401 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Zfp58P16372 489 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 CrygcQ61597 174 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Fam110aQ8R184 296 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr1184Q8VG86 311 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr972Q9EQA2 314 aa10.59□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gm884A2A9H6 3643 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Tcf20Q9EPQ8 1987 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Vmn1r149E9PWL6 307 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Vmn1r101E9Q365 307 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Vmn1r158G3UY92 307 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr1154L7MU57 310 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Acrv1P50289 261 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 RanP62827 216 aaKnown RBP10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr963Q7TRA9 311 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Mbnl2Q8C181 373 aaKnown RBP10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Q9D8L0 127 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Nudt3Q9JI46 168 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Trav5-1A0A075B5Z7 114 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 1500009C09RikD3YYW9 81 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 CideaO70302 217 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 P01789 122 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Wnt5bP22726 359 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 CapgP24452 352 aaKnown RBP10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 AmelxP63277 210 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr399Q7TRX3 311 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Znf146Q8BQN6 292 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Tmem178aQ9CZ16 297 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 Tmem190Q9D2E9 166 aa10.58□□□□□ -0.72
Nup88-203ENSMUST00000108531 9830107B12RikD3Z5D6 160 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Ascl2O35885 263 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Hoxa6P09092 232 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Hes1P35428 282 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Loxl1P97873 607 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Folr2Q05685 251 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Znf691Q3TDE8 283 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Gm10842Q3U587 122 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Prelid1Q8R107 217 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 ChodlQ9CXM0 273 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 TecrQ9CY27 308 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Atg101Q9D8Z6 218 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Ighv1-15A0A0A6YXA5 117 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr1116E9PXB8 307 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Cdkn1bP46414 197 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Nkx3-1P97436 237 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Gm5468Q8C3D3 155 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Rpp25lQ99JH1 163 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Tmem167aQ9CR64 72 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 4931428L18RikQ9D4S9 127 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Dchs1E9PVD3 3291 aa10.57□□□□□ -0.72
Nup88-203ENSMUST00000108531 Dmxl1Q6PNC0 3013 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Trav12d-3A0A075B6A4 115 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 1700084M14RikB1AT01 78 aa10.56□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms