Protein–RNA interactions for Protein: Q8R269

Vmn1r222, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r222Q8R269 Gm25239-201ENSMUST00000174915 86 ntBASIC29.51■■■□□ 2.31
Vmn1r222Q8R269 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Vmn1r222Q8R269 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Vmn1r222Q8R269 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Vmn1r222Q8R269 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Vmn1r222Q8R269 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Vmn1r222Q8R269 Gm15042-201ENSMUST00000120212 883 ntBASIC26.19■■□□□ 1.78
Vmn1r222Q8R269 Psd-208ENSMUST00000224556 2034 ntBASIC25.68■■□□□ 1.7
Vmn1r222Q8R269 Gm15045-201ENSMUST00000117359 883 ntBASIC25.65■■□□□ 1.7
Vmn1r222Q8R269 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Vmn1r222Q8R269 Gm24109-201ENSMUST00000175489 103 ntBASIC25.38■■□□□ 1.65
Vmn1r222Q8R269 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Vmn1r222Q8R269 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Vmn1r222Q8R269 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.06■■□□□ 1.6
Vmn1r222Q8R269 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Vmn1r222Q8R269 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Vmn1r222Q8R269 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Vmn1r222Q8R269 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Vmn1r222Q8R269 Gm23366-201ENSMUST00000175022 89 ntBASIC24.73■■□□□ 1.55
Vmn1r222Q8R269 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Vmn1r222Q8R269 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Vmn1r222Q8R269 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Vmn1r222Q8R269 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Vmn1r222Q8R269 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Vmn1r222Q8R269 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Vmn1r222Q8R269 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vmn1r222Q8R269 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vmn1r222Q8R269 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Vmn1r222Q8R269 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Vmn1r222Q8R269 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.4■■□□□ 1.5
Vmn1r222Q8R269 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vmn1r222Q8R269 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Vmn1r222Q8R269 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Vmn1r222Q8R269 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.14■■□□□ 1.45
Vmn1r222Q8R269 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Vmn1r222Q8R269 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Vmn1r222Q8R269 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.04■■□□□ 1.44
Vmn1r222Q8R269 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Vmn1r222Q8R269 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Vmn1r222Q8R269 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Vmn1r222Q8R269 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vmn1r222Q8R269 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vmn1r222Q8R269 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vmn1r222Q8R269 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.73■■□□□ 1.39
Vmn1r222Q8R269 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vmn1r222Q8R269 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Vmn1r222Q8R269 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Vmn1r222Q8R269 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.49■■□□□ 1.35
Vmn1r222Q8R269 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.46■■□□□ 1.35
Vmn1r222Q8R269 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Vmn1r222Q8R269 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.42■■□□□ 1.34
Vmn1r222Q8R269 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Vmn1r222Q8R269 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Vmn1r222Q8R269 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Vmn1r222Q8R269 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vmn1r222Q8R269 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
Vmn1r222Q8R269 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vmn1r222Q8R269 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vmn1r222Q8R269 Gm25238-201ENSMUST00000174914 89 ntBASIC23.16■■□□□ 1.3
Vmn1r222Q8R269 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Vmn1r222Q8R269 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Vmn1r222Q8R269 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.14■■□□□ 1.29
Vmn1r222Q8R269 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Vmn1r222Q8R269 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Vmn1r222Q8R269 Gm27325-201ENSMUST00000175467 74 ntBASIC23.01■■□□□ 1.27
Vmn1r222Q8R269 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.01■■□□□ 1.27
Vmn1r222Q8R269 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Vmn1r222Q8R269 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.98■■□□□ 1.27
Vmn1r222Q8R269 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vmn1r222Q8R269 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
Vmn1r222Q8R269 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.96■■□□□ 1.27
Vmn1r222Q8R269 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Vmn1r222Q8R269 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vmn1r222Q8R269 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.89■■□□□ 1.25
Vmn1r222Q8R269 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.88■■□□□ 1.25
Vmn1r222Q8R269 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.85■■□□□ 1.25
Vmn1r222Q8R269 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Vmn1r222Q8R269 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vmn1r222Q8R269 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vmn1r222Q8R269 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vmn1r222Q8R269 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
Vmn1r222Q8R269 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vmn1r222Q8R269 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Vmn1r222Q8R269 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Vmn1r222Q8R269 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Vmn1r222Q8R269 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Vmn1r222Q8R269 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vmn1r222Q8R269 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Vmn1r222Q8R269 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Vmn1r222Q8R269 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Vmn1r222Q8R269 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.57■■□□□ 1.2
Vmn1r222Q8R269 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.53■■□□□ 1.2
Vmn1r222Q8R269 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vmn1r222Q8R269 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Vmn1r222Q8R269 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Vmn1r222Q8R269 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.49■■□□□ 1.19
Vmn1r222Q8R269 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vmn1r222Q8R269 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Vmn1r222Q8R269 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vmn1r222Q8R269 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms