RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 CCL4L1Q8NHW4 92 aa-0.21□□□□□ -2.44
ATM-220ENST00000533526 AP1S3Q96PC3 154 aa-0.21□□□□□ -2.44
ATM-220ENST00000533526 PAIP2Q9BPZ3 127 aaKnown RBP-0.21□□□□□ -2.44
ATM-220ENST00000533526 SYNMO15061 1565 aa-0.21□□□□□ -2.44
ATM-220ENST00000533526 HERC1Q15751 4861 aa-0.21□□□□□ -2.44
ATM-220ENST00000533526 FGD6Q6ZV73 1430 aa-0.21□□□□□ -2.44
ATM-220ENST00000533526 CHD6Q8TD26 2715 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 PKHD1P08F94 4074 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 SPEF2Q9C093 1822 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 UNC79Q9P2D8 2635 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 ZNF292O60281 2723 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 A0A096LNT2 108 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 A0A0G2JMM0 328 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 A0A1B0GW64 132 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 A0A1W2PPB8 328 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 RIIAD1A6NNX1 92 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 KIR3DP1A8MWS1 328 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 H7C1C5 153 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 CDC42EP2O14613 210 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 SPINK1P00995 79 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 IGKCP01834 107 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 PRM1P04553 51 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 RPL7P18124 248 aaKnown RBP-0.22□□□□□ -2.44
ATM-220ENST00000533526 OGNP20774 298 aaKnown RBP-0.22□□□□□ -2.44
ATM-220ENST00000533526 RPS3P23396 243 aaKnown RBP eCLIP-0.22□□□□□ -2.44
ATM-220ENST00000533526 G0S2P27469 103 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 HSD11B1P28845 292 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 CRYBA4P53673 196 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 LCN6P62502 163 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 FXYD3Q14802 87 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 SNCBQ16143 134 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 PHF5AQ7RTV0 110 aaKnown RBP-0.22□□□□□ -2.44
ATM-220ENST00000533526 C5orf56Q8N8D9 126 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 PHB2Q99623 299 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 EFCAB11Q9BUY7 163 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 LRTM1Q9HBL6 345 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 COMMD3Q9UBI1 195 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 NAT8BQ9UHF3 227 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 PRNDQ9UKY0 176 aa-0.22□□□□□ -2.44
ATM-220ENST00000533526 BTAF1O14981 1849 aa-0.22□□□□□ -2.45
ATM-220ENST00000533526 KIAA1107Q9UPP5 1409 aa-0.22□□□□□ -2.45
ATM-220ENST00000533526 CDK12Q9NYV4 1490 aaPredicted RBP-0.22□□□□□ -2.45
ATM-220ENST00000533526 PLCE1Q9P212 2302 aa-0.22□□□□□ -2.45
ATM-220ENST00000533526 PTPRQQ9UMZ3 2332 aa-0.22□□□□□ -2.45
ATM-220ENST00000533526 PKD1L1Q8TDX9 2849 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 DLC1Q96QB1 1528 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 UBR4Q5T4S7 5183 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 LYSTQ99698 3801 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 USH2AO75445 5202 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 SHROOM2Q13796 1616 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.23□□□□□ -2.45
ATM-220ENST00000533526 FLNCQ14315 2725 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 HERC2O95714 4834 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 ATP5HO75947 161 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 EVI2AP22794 236 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 PHBP35232 272 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 PPP1R2P41236 205 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 RPL35P42766 123 aaKnown RBP-0.23□□□□□ -2.45
ATM-220ENST00000533526 GNG10P50151 68 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 GNG3P63215 75 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 NEDD8Q15843 81 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 ZNF56Q15929 161 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 KRTAP6-1Q3LI64 71 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 FKBP1CQ5VVH2 108 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 HACD4Q5VWC8 232 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 PPP1R2P3Q6NXS1 205 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 TEX29Q8N6K0 151 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 DIRC1Q969H9 104 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 MCEEQ96PE7 176 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 GINS3Q9BRX5 216 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 PROK2Q9HC23 129 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 LYRM2Q9NU23 88 aaPredicted RBP-0.23□□□□□ -2.45
ATM-220ENST00000533526 TPRKBQ9Y3C4 175 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 PSME4Q14997 1843 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 MYH7P12883 1935 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 RTL9Q8NET4 1388 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 PTPRGP23470 1445 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 ARHGAP31Q2M1Z3 1444 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 GOLGA3Q08378 1498 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 ARAP1Q96P48 1450 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 KIAA0100Q14667 2235 aaKnown RBP-0.23□□□□□ -2.45
ATM-220ENST00000533526 USF3Q68DE3 2245 aa-0.23□□□□□ -2.45
ATM-220ENST00000533526 PPRC1Q5VV67 1664 aaKnown RBP-0.24□□□□□ -2.45
ATM-220ENST00000533526 ROBO1Q9Y6N7 1651 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 TSC2P49815 1807 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 NBPF19A0A087WUL8 3843 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 TRDV1A0A1B0GX56 115 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 CLPSL1A2RUU4 121 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 GABARAPH6UMI1 98 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 PITX3O75364 302 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 CST7O76096 145 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 ATG12O94817 140 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 TAS2R41P59536 307 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 HBBP68871 147 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 REEP5Q00765 189 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 FADDQ13158 208 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 TMED2Q15363 201 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 Q5BKY6 102 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 AKR1C8PQ5T2L2 129 aa-0.24□□□□□ -2.45
ATM-220ENST00000533526 C1orf140Q5VVS0 124 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms