RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 AEBP2Q6ZN18 517 aaPredicted RBP14.98□□□□□ -0.01
ATM-220ENST00000533526 CHIC1Q5VXU3 224 aa14.69□□□□□ -0.06
ATM-220ENST00000533526 PHF23Q9BUL5 403 aaPredicted RBP12.88□□□□□ -0.35
ATM-220ENST00000533526 SENP3Q9H4L4 574 aaPredicted RBP12.81□□□□□ -0.36
ATM-220ENST00000533526 PLPPR3Q6T4P5 718 aa11.97□□□□□ -0.49
ATM-220ENST00000533526 FOXD1Q16676 465 aa11.82□□□□□ -0.52
ATM-220ENST00000533526 ADRA2BP18089 450 aa11.36□□□□□ -0.59
ATM-220ENST00000533526 PPP6R1Q9UPN7 881 aa11.36□□□□□ -0.59
ATM-220ENST00000533526 PIAS4Q8N2W9 510 aaPredicted RBP11.17□□□□□ -0.62
ATM-220ENST00000533526 MSH5O43196 834 aa10.98□□□□□ -0.65
ATM-220ENST00000533526 PPP4R3CPQ6ZMV5 832 aa10.52□□□□□ -0.73
ATM-220ENST00000533526 SCAF1Q9H7N4 1312 aaKnown RBP10.51□□□□□ -0.73
ATM-220ENST00000533526 NCBP3Q53F19 620 aaKnown RBP10.31□□□□□ -0.76
ATM-220ENST00000533526 MAPK8IP2Q13387 824 aaPredicted RBP10.29□□□□□ -0.76
ATM-220ENST00000533526 CNKSR2Q8WXI2 1034 aa10.26□□□□□ -0.77
ATM-220ENST00000533526 KCNA4P22459 653 aa10.23□□□□□ -0.77
ATM-220ENST00000533526 DMRT2Q9Y5R5 561 aa10.2□□□□□ -0.78
ATM-220ENST00000533526 NPM3O75607 178 aaKnown RBP10.07□□□□□ -0.8
ATM-220ENST00000533526 RNF216Q9NWF9 866 aaPredicted RBP10.05□□□□□ -0.8
ATM-220ENST00000533526 HOXD11P31277 338 aaPredicted RBP10□□□□□ -0.81
ATM-220ENST00000533526 POTEDQ86YR6 584 aa9.93□□□□□ -0.82
ATM-220ENST00000533526 DNAJC5BQ9UF47 199 aa9.85□□□□□ -0.83
ATM-220ENST00000533526 SLC4A1APQ9BWU0 796 aaKnown RBP9.78□□□□□ -0.84
ATM-220ENST00000533526 DCAF8L1A6NGE4 600 aa9.75□□□□□ -0.85
ATM-220ENST00000533526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.54□□□□□ -0.886e-9■■□□□ 11.5
ATM-220ENST00000533526 SLC4A2P04920 1241 aa9.49□□□□□ -0.89
ATM-220ENST00000533526 FOXD4L1Q9NU39 408 aa9.46□□□□□ -0.9
ATM-220ENST00000533526 EHMT2Q96KQ7 1210 aa9.45□□□□□ -0.9
ATM-220ENST00000533526 ZBTB22O15209 634 aa9.37□□□□□ -0.91
ATM-220ENST00000533526 CSRNP3Q8WYN3 585 aa9.37□□□□□ -0.91
ATM-220ENST00000533526 RNF39Q9H2S5 420 aa9.36□□□□□ -0.91
ATM-220ENST00000533526 MYCNP04198 464 aaPredicted RBP9.35□□□□□ -0.91
ATM-220ENST00000533526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.33□□□□□ -0.92
ATM-220ENST00000533526 HNRNPUL2Q1KMD3 747 aaKnown RBP9.33□□□□□ -0.92
ATM-220ENST00000533526 U3KPZ7 1027 aaPredicted RBP9.33□□□□□ -0.92
ATM-220ENST00000533526 C1QBPQ07021 282 aaKnown RBP9.31□□□□□ -0.92
ATM-220ENST00000533526 SAMD1Q6SPF0 538 aaPredicted RBP9.26□□□□□ -0.93
ATM-220ENST00000533526 APLP2Q06481 763 aa9.25□□□□□ -0.93
ATM-220ENST00000533526 ATXN8OSP0DMR3 200 aa9.19□□□□□ -0.94
ATM-220ENST00000533526 CACNB1Q02641 598 aaPredicted RBP9.14□□□□□ -0.95
ATM-220ENST00000533526 CAPN15O75808 1086 aa9.07□□□□□ -0.96
ATM-220ENST00000533526 SPINK5Q9NQ38 1064 aaPredicted RBP9.06□□□□□ -0.96
ATM-220ENST00000533526 ZNF219Q9P2Y4 722 aaPredicted RBP9.06□□□□□ -0.96
ATM-220ENST00000533526 TRHP20396 242 aaPredicted RBP9.01□□□□□ -0.97
ATM-220ENST00000533526 ATF5Q9Y2D1 282 aaPredicted RBP9.01□□□□□ -0.97
ATM-220ENST00000533526 DSG3P32926 999 aa8.91□□□□□ -0.98
ATM-220ENST00000533526 POLA2Q14181 598 aa8.88□□□□□ -0.99
ATM-220ENST00000533526 ABCB7O75027 752 aa8.85□□□□□ -0.99
ATM-220ENST00000533526 ZBTB12Q9Y330 459 aaPredicted RBP8.79□□□□□ -1
ATM-220ENST00000533526 FBLN2P98095 1184 aa8.75□□□□□ -1.01
ATM-220ENST00000533526 MKRN4PQ13434 485 aaPredicted RBP8.63□□□□□ -1.03
ATM-220ENST00000533526 RBM42Q9BTD8 480 aaKnown RBP8.55□□□□□ -1.04
ATM-220ENST00000533526 SPDYE2BA6NHP3 402 aa8.54□□□□□ -1.04
ATM-220ENST00000533526 SPDYE6P0CI01 402 aa8.54□□□□□ -1.04
ATM-220ENST00000533526 SPDYE2Q495Y8 402 aa8.54□□□□□ -1.04
ATM-220ENST00000533526 OSCARQ8IYS5 282 aa8.54□□□□□ -1.04
ATM-220ENST00000533526 SPDYE4A6NLX3 237 aa8.5□□□□□ -1.05
ATM-220ENST00000533526 FKBP8Q14318 412 aa8.48□□□□□ -1.05
ATM-220ENST00000533526 ZNF692Q9BU19 519 aaPredicted RBP8.48□□□□□ -1.05
ATM-220ENST00000533526 AKT1S1Q96B36 256 aa8.43□□□□□ -1.06
ATM-220ENST00000533526 SSUH2Q9Y2M2 353 aa8.43□□□□□ -1.06
ATM-220ENST00000533526 PABPN1Q86U42 306 aaKnown RBP eCLIP8.35□□□□□ -1.07
ATM-220ENST00000533526 PROM2Q8N271 834 aa8.34□□□□□ -1.07
ATM-220ENST00000533526 REM2Q8IYK8 340 aaPredicted RBP8.31□□□□□ -1.08
ATM-220ENST00000533526 SPDYE1Q8NFV5 336 aaPredicted RBP8.29□□□□□ -1.08
ATM-220ENST00000533526 STAG3Q9UJ98 1225 aa8.29□□□□□ -1.08
ATM-220ENST00000533526 FBXO3Q9UK99 471 aa8.27□□□□□ -1.09
ATM-220ENST00000533526 CLEC11AQ9Y240 323 aa8.21□□□□□ -1.1
ATM-220ENST00000533526 PITPNM1O00562 1244 aa8.19□□□□□ -1.1
ATM-220ENST00000533526 PRR29P0C7W0 189 aa8.17□□□□□ -1.1
ATM-220ENST00000533526 CHRDL2Q6WN34 429 aa8.14□□□□□ -1.11
ATM-220ENST00000533526 PLEKHG5O94827 1062 aa8.1□□□□□ -1.11
ATM-220ENST00000533526 VASPP50552 380 aaPredicted RBP8.08□□□□□ -1.12
ATM-220ENST00000533526 MIER1Q8N108 512 aa8.08□□□□□ -1.12
ATM-220ENST00000533526 FXR2P51116 673 aaKnown RBP eCLIP8.07□□□□□ -1.12
ATM-220ENST00000533526 PLCD3Q8N3E9 789 aa8.07□□□□□ -1.12
ATM-220ENST00000533526 PIP4P2Q8N4L2 257 aa8.03□□□□□ -1.12
ATM-220ENST00000533526 ZBTB47Q9UFB7 747 aaPredicted RBP8.03□□□□□ -1.12
ATM-220ENST00000533526 CREBZFQ9NS37 354 aa8.02□□□□□ -1.13
ATM-220ENST00000533526 PRKAR2AP13861 404 aaKnown RBP8.01□□□□□ -1.13
ATM-220ENST00000533526 NPM1P06748 294 aaKnown RBP eCLIP7.97□□□□□ -1.13
ATM-220ENST00000533526 CHADLQ6NUI6 762 aa7.97□□□□□ -1.13
ATM-220ENST00000533526 KLHL34Q8N239 644 aa7.97□□□□□ -1.13
ATM-220ENST00000533526 IFNLR1Q8IU57 520 aaPredicted RBP7.95□□□□□ -1.14
ATM-220ENST00000533526 FARP1Q9Y4F1 1045 aaPredicted RBP7.95□□□□□ -1.14
ATM-220ENST00000533526 MNX1P50219 401 aaPredicted RBP7.92□□□□□ -1.14
ATM-220ENST00000533526 SPOCK2Q92563 424 aa7.9□□□□□ -1.14
ATM-220ENST00000533526 POTEHQ6S545 545 aa7.88□□□□□ -1.15
ATM-220ENST00000533526 NUBP1P53384 320 aa7.84□□□□□ -1.15
ATM-220ENST00000533526 PAK3O75914 559 aaPredicted RBP7.82□□□□□ -1.16
ATM-220ENST00000533526 GSE1Q14687 1217 aa7.81□□□□□ -1.16
ATM-220ENST00000533526 FAM212AQ96EL1 285 aa7.81□□□□□ -1.16
ATM-220ENST00000533526 DCAF8Q5TAQ9 597 aa7.8□□□□□ -1.16
ATM-220ENST00000533526 C19orf67A6NJJ6 358 aa7.79□□□□□ -1.16
ATM-220ENST00000533526 HAX1O00165 279 aa7.79□□□□□ -1.16
ATM-220ENST00000533526 CD44P16070 742 aaKnown RBP7.78□□□□□ -1.16
ATM-220ENST00000533526 AMER1Q5JTC6 1135 aaPredicted RBP7.78□□□□□ -1.16
ATM-220ENST00000533526 RASEFQ8IZ41 740 aa7.78□□□□□ -1.16
ATM-220ENST00000533526 TSPYL2Q9H2G4 693 aaPredicted RBP7.77□□□□□ -1.17
ATM-220ENST00000533526 CIZ1Q9ULV3 898 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms