RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 C1ql2Q8CFR0 287 aa11.73□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Ndfip1Q8R0W6 221 aa11.73□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Slc25a28Q8R0Z5 364 aa11.73□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Ncor1Q60974 2453 aa11.73□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Tmem92B7ZWI3 162 aa11.73□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Defa6P50704 93 aa11.73□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Olfr16Q62007 309 aa11.73□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Trav6d-5A0A075B6B9 112 aa11.73□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Olfr898L7N1Z5 316 aa11.73□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Emp2O88662 172 aa11.73□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 EtdQ80SW5 59 aa11.73□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Prr30Q9D9B7 401 aa11.73□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Ighv4-1A0A075B5R5 116 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Ighv14-2A0A075B5R7 117 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Gm5741B2RVA4 72 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Defa34D3Z0J0 93 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Olfr556E9Q549 324 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Il11P47873 199 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Rtp3Q5QGU6 474 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Ap5s1Q9D742 170 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Q9DAA3 117 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Olfr902E9Q6Z7 309 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Ca2P00920 260 aaKnown RBP11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Defb4P82019 63 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Ifna11Q61716 190 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 RpeQ8VEE0 228 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Ms4a3Q920C4 213 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Myoz1Q9JK37 296 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Spry4Q9WTP2 300 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Gm6993A0A1W2P738 69 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Ceacam9Q78T27 234 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Stxbp6Q8R3T5 210 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Mpv17lQ99MS3 194 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Vmn1r54Q9EPB8 315 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Ighv1-76A0A0G2JFE9 117 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Defa30E9QPZ2 93 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Ca11O70354 328 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Sfrp2P97299 295 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Megf10Q6DIB5 1147 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Olfr823Q7TRH2 315 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Vmn1r202Q8R259 302 aa11.72□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 P06323 132 aa11.71□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Vmn1r232A2RTT5 351 aa11.71□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Rpl27aP14115 148 aaKnown RBP11.71□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Olfr1339Q8VGB1 315 aa11.71□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Mrps36Q9CQX8 102 aa11.71□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 MpdzQ8VBX6 2055 aa11.71□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Vmn1r78K7N608 313 aa11.71□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Mfge8P21956 463 aaKnown RBP11.71□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Hide1Q75VT8 222 aa11.71□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Higd1cQ76I25 96 aa11.71□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Gm5148Q8BGG2 154 aa11.71□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Gpr4Q8BUD0 365 aa11.71□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 Rtn4rQ99PI8 473 aa11.71□□□□□ -0.53
Pcdha1-202ENSMUST00000193839 D830044I16RikA0A1D5RM53 117 aa11.71□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Foxa2P35583 459 aa11.71□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 C2cd4aE9Q861 334 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gm2381G3UY53 305 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Defb33Q30KN3 62 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gm11110Q3U4K9 109 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Trav3n-3A0A0G2JEM0 114 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Tmem238lA0A1B0GS74 79 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr399Q7TRX3 311 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Ndufs8Q8K3J1 212 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Ptrh2Q8R2Y8 181 aaKnown RBP11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Vmn1r46Q9EQ45 309 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Cited2O35740 269 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Defa13P50711 93 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Dnajc30P59041 219 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Col8a1Q00780 744 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Znf260Q62513 407 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 AtraidQ6PGD0 223 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Q6PIU9 354 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Bpifb3Q80ZU7 473 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Q8BTC1 67 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 MturnQ8CGA4 131 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr577Q8VH11 312 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr1245A0A1L1SQJ6 307 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gm14443A2ARX0 610 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 P01796 113 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 P01797 113 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 P01799 113 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Znf691Q3TDE8 283 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Klk14Q8CGR5 250 aa11.7□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Igkv14-126A0A075B5K0 117 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 PspnO70300 156 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Hist1h2bmP10854 126 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Smim9Q3V0X1 137 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Hist1h2bhQ64478 126 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Hist2h2bbQ64525 126 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Hist1h2bcQ6ZWY9 126 aaKnown RBP11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 FetubQ9QXC1 388 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Tnfrsf26P83626 204 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Cd200r3Q5UKY4 296 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Msrb2Q78J03 175 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Fbxw4Q9JMJ2 410 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Sfrp4Q9Z1N6 351 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Mpv17P19258 176 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr143P34985 313 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 RprmlQ3URD2 117 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 139.3 ms