RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SCGB3A1Q96QR1 104 aa11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 CUL9Q8IWT3 2517 aa11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 TRBV7-1A0A0A6YYK4 115 aa11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 LDLRAD2Q5SZI1 272 aa11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 C14orf144Q96I85 54 aa11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 TCF21O43680 179 aa11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 CIDEAO60543 219 aa11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 KRTAP27-1Q3LI81 207 aa11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 GEMIN7Q9H840 131 aaKnown RBP11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 TOMM40O96008 361 aa11.51□□□□□ -0.57
PCDHGA11-201ENST00000398587 PRSS2P07478 247 aa11.51□□□□□ -0.57
PCDHGA11-201ENST00000398587 RASL11AQ6T310 242 aa11.51□□□□□ -0.57
PCDHGA11-201ENST00000398587 FBLN7Q53RD9 439 aa11.51□□□□□ -0.57
PCDHGA11-201ENST00000398587 TMEM8BA6NDV4 472 aa11.51□□□□□ -0.57
PCDHGA11-201ENST00000398587 NDUFS8O00217 210 aa11.51□□□□□ -0.57
PCDHGA11-201ENST00000398587 CD7P09564 240 aa11.51□□□□□ -0.57
PCDHGA11-201ENST00000398587 NXT2Q9NPJ8 142 aaKnown RBP11.51□□□□□ -0.57
PCDHGA11-201ENST00000398587 SRCAPQ6ZRS2 3230 aa11.51□□□□□ -0.57
PCDHGA11-201ENST00000398587 K7ERU9 68 aa11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 SLC25A16P16260 332 aa11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 CACNG7P62955 275 aa11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 OTOGLQ3ZCN5 2332 aa11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 IGKV2-40A0A087WW87 121 aaPredicted RBP11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 IGKV2D-40P01614 121 aaPredicted RBP11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 LEPP41159 167 aa11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 UBE2E1P51965 193 aa11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 FOXC2Q99958 501 aa11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 KAAG1Q9UBP8 84 aa11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 ZNF134P52741 427 aa11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 C9orf139Q6ZV77 190 aa11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 C11orf53Q8IXP5 236 aa11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 SLX1AQ9BQ83 275 aa11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 USMG5Q96IX5 58 aa11.5□□□□□ -0.57
PCDHGA11-201ENST00000398587 TRAV8-6A0A0B4J262 113 aa11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 COX6CP09669 75 aa11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 PPIFP30405 207 aaKnown RBP11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 LINC01587Q99440 93 aa11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 FGF23Q9GZV9 251 aaPredicted RBP11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 MMP23AO75900 390 aa11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 HBDP02042 147 aa11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 AMBPP02760 352 aa11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 TCF15Q12870 199 aa11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 JMJD8Q96S16 334 aa11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 FAM181BA6NEQ2 426 aa11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 TMEM170BQ5T4T1 132 aa11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 CHCHD1Q96BP2 118 aaKnown RBP11.49□□□□□ -0.57
PCDHGA11-201ENST00000398587 LOC107984156A0A0G2JMH3 177 aa11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 POU2AF1Q16633 256 aa11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 GFI1BQ5VTD9 330 aa11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 ARL17AQ8IVW1 177 aa11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 DKK4Q9UBT3 224 aa11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 A0A1W2PRX2 142 aa11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 PSMB11A5LHX3 300 aa11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 SHANK2-AS3Q9BTD1 123 aa11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 A0A1W2PNU3 283 aaPredicted RBP11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 GZMBP10144 247 aa11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 ZNF138P52744 262 aa11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 CIRBPQ14011 172 aaKnown RBP11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 PCDH15Q96QU1 1955 aa11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 NIT1Q86X76 327 aa11.48□□□□□ -0.57
PCDHGA11-201ENST00000398587 TRAV8-1A0A0A6YYK1 113 aa11.47□□□□□ -0.57
PCDHGA11-201ENST00000398587 PDE6HQ13956 83 aa11.47□□□□□ -0.57
PCDHGA11-201ENST00000398587 NDUFAF3Q9BU61 184 aa11.47□□□□□ -0.57
PCDHGA11-201ENST00000398587 K7EM74 188 aa11.47□□□□□ -0.57
PCDHGA11-201ENST00000398587 FAM223BA6NKX1 122 aa11.47□□□□□ -0.57
PCDHGA11-201ENST00000398587 A6NNC1 897 aa11.47□□□□□ -0.57
PCDHGA11-201ENST00000398587 LINC00587B1AMM8 73 aa11.47□□□□□ -0.57
PCDHGA11-201ENST00000398587 PSG3Q16557 428 aa11.47□□□□□ -0.57
PCDHGA11-201ENST00000398587 ACTL10Q5JWF8 245 aa11.47□□□□□ -0.57
PCDHGA11-201ENST00000398587 FAM223AQ8IWN6 122 aa11.47□□□□□ -0.57
PCDHGA11-201ENST00000398587 CRXO43186 299 aaPredicted RBP11.46□□□□□ -0.57
PCDHGA11-201ENST00000398587 ZNF329Q86UD4 541 aa11.46□□□□□ -0.57
PCDHGA11-201ENST00000398587 HAPLN4Q86UW8 402 aa11.46□□□□□ -0.57
PCDHGA11-201ENST00000398587 TTC9CQ8N5M4 171 aa11.46□□□□□ -0.57
PCDHGA11-201ENST00000398587 H3BVH4 76 aa11.46□□□□□ -0.57
PCDHGA11-201ENST00000398587 NUP35Q8NFH5 326 aa11.46□□□□□ -0.57
PCDHGA11-201ENST00000398587 CD33P20138 364 aa11.46□□□□□ -0.58
PCDHGA11-201ENST00000398587 CNTFRP26992 372 aa11.46□□□□□ -0.58
PCDHGA11-201ENST00000398587 YPEL3P61236 119 aaPredicted RBP11.46□□□□□ -0.58
PCDHGA11-201ENST00000398587 LCN12Q6JVE5 192 aa11.46□□□□□ -0.58
PCDHGA11-201ENST00000398587 ST20Q9HBF5 79 aa11.46□□□□□ -0.58
PCDHGA11-201ENST00000398587 TRAV9-2A0A087WT02 112 aa11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 ZNF726P1Q15940 193 aa11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 ST6GALNAC6Q969X2 333 aa11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 ZNF256Q9Y2P7 627 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 NOTCH2Q04721 2471 aa11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 MSMBP08118 114 aa11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 SRD5A1P18405 259 aa11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 GATA3P23771 443 aa11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 WT1-ASQ06250 92 aa11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 SRSF1Q07955 248 aaKnown RBP eCLIP11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 PRB4P10163 310 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 LINC01356Q8N9X3 169 aa11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 FAM110DQ8TAY7 271 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 SMIM12Q96EX1 92 aa11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 COPS9Q8WXC6 57 aa11.45□□□□□ -0.58
PCDHGA11-201ENST00000398587 A0A1B0GV90 55 aa11.44□□□□□ -0.58
PCDHGA11-201ENST00000398587 H7C2G1 150 aa11.44□□□□□ -0.58
PCDHGA11-201ENST00000398587 STHQ8IWL8 128 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms