RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeast

Gene SNF8, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF8	YPL002C	YBR182C-A	Q8TGU6	64 aa		4.78	□□□□□ -1.64
SNF8	YPL002C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
SNF8	YPL002C	GFA1	P14742	717 aa	Known RBP	4.77	□□□□□ -1.65
SNF8	YPL002C	PPZ2	P33329	710 aa		4.77	□□□□□ -1.65
SNF8	YPL002C	CAB3	P36076	571 aa		4.77	□□□□□ -1.65
SNF8	YPL002C	PES4	P39684	611 aa		4.77	□□□□□ -1.65
SNF8	YPL002C	VPS8	P39702	1274 aa		4.77	□□□□□ -1.65
SNF8	YPL002C	HUL4	P40985	892 aa		4.77	□□□□□ -1.65
SNF8	YPL002C	ALG2	P43636	503 aa		4.77	□□□□□ -1.65
SNF8	YPL002C	IRC8	P47046	822 aa		4.77	□□□□□ -1.65
SNF8	YPL002C	ART5	P53244	586 aa	Known RBP	4.77	□□□□□ -1.65
SNF8	YPL002C	REH1	Q06709	432 aa		4.77	□□□□□ -1.65
SNF8	YPL002C	SGO1	Q08490	590 aa		4.77	□□□□□ -1.65
SNF8	YPL002C	FLC1	Q08967	793 aa		4.77	□□□□□ -1.65
SNF8	YPL002C	FMP27	Q06179	2628 aa		4.76	□□□□□ -1.65
SNF8	YPL002C	SAM2	P19358	384 aa	Known RBP	4.76	□□□□□ -1.65
SNF8	YPL002C	KIN3	P22209	435 aa		4.76	□□□□□ -1.65
SNF8	YPL002C	MCR1	P36060	302 aa	Known RBP	4.76	□□□□□ -1.65
SNF8	YPL002C	PHO88	P38264	188 aa	Predicted RBP	4.76	□□□□□ -1.65
SNF8	YPL002C	YNG2	P38806	282 aa	Known RBP	4.76	□□□□□ -1.65
SNF8	YPL002C	RTS1	P38903	757 aa		4.76	□□□□□ -1.65
SNF8	YPL002C	RRP8	P38961	392 aa	Known RBP	4.76	□□□□□ -1.65
SNF8	YPL002C	FMP52	P40008	231 aa		4.76	□□□□□ -1.65
SNF8	YPL002C	VID27	P40157	782 aa		4.76	□□□□□ -1.65
SNF8	YPL002C	HXT16	P47185	567 aa		4.76	□□□□□ -1.65
SNF8	YPL002C	HSV2	P50079	448 aa	Predicted RBP	4.76	□□□□□ -1.65
SNF8	YPL002C	AZR1	P50080	613 aa		4.76	□□□□□ -1.65
SNF8	YPL002C	YGL039W	P53183	348 aa	Known RBP	4.76	□□□□□ -1.65
SNF8	YPL002C	SPH1	Q06160	661 aa		4.76	□□□□□ -1.65
SNF8	YPL002C	ERP3	Q12403	225 aa		4.76	□□□□□ -1.65
SNF8	YPL002C	SEN1	Q00416	2231 aa	Known RBP	4.76	□□□□□ -1.65
SNF8	YPL002C	TY1B-A	O13527	1196 aa	Known RBP	4.75	□□□□□ -1.65
SNF8	YPL002C	SUI2	P20459	304 aa	Known RBP	4.75	□□□□□ -1.65
SNF8	YPL002C	TKL1	P23254	680 aa	Known RBP	4.75	□□□□□ -1.65
SNF8	YPL002C	CHS3	P29465	1165 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	SYN8	P31377	255 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	SHP1	P34223	423 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	FLO10	P36170	1169 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	REG2	P38232	338 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	CBR1	P38626	284 aa	Known RBP	4.75	□□□□□ -1.65
SNF8	YPL002C	RIX1	P38883	763 aa	Predicted RBP	4.75	□□□□□ -1.65
SNF8	YPL002C	FMP10	P40098	244 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	TY4A-J	P47023	414 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	UBC11	P52492	156 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	TEL2	P53038	688 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	YGL242C	P53066	181 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	TEX1	P53851	422 aa	Known RBP	4.75	□□□□□ -1.65
SNF8	YPL002C	SKY1	Q03656	742 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	YDR514C	Q04408	483 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	EMI2	Q04409	500 aa	Known RBP	4.75	□□□□□ -1.65
SNF8	YPL002C	RAD61	Q99359	647 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	MOT1	P32333	1867 aa		4.75	□□□□□ -1.65
SNF8	YPL002C	MET6	P05694	767 aa	Known RBP	4.74	□□□□□ -1.65
SNF8	YPL002C	MAS2	P11914	482 aa		4.74	□□□□□ -1.65
SNF8	YPL002C	POL3	P15436	1097 aa		4.74	□□□□□ -1.65
SNF8	YPL002C	CDC43	P18898	376 aa		4.74	□□□□□ -1.65
SNF8	YPL002C	HIR1	P32479	840 aa		4.74	□□□□□ -1.65
SNF8	YPL002C	TGL1	P34163	548 aa		4.74	□□□□□ -1.65
SNF8	YPL002C	DBP7	P36120	742 aa	Known RBP	4.74	□□□□□ -1.65
SNF8	YPL002C	VPS45	P38932	577 aa		4.74	□□□□□ -1.65
SNF8	YPL002C	RLP7	P40693	322 aa	Known RBP	4.74	□□□□□ -1.65
SNF8	YPL002C	MTR3	P48240	250 aa	Predicted RBP	4.74	□□□□□ -1.65
SNF8	YPL002C	SCS3	P53012	380 aa		4.74	□□□□□ -1.65
SNF8	YPL002C	ZIP2	P53061	704 aa		4.74	□□□□□ -1.65
SNF8	YPL002C	ATP25	Q03153	612 aa		4.74	□□□□□ -1.65
SNF8	YPL002C	HCA4	P20448	770 aa	Known RBP	4.73	□□□□□ -1.65
SNF8	YPL002C	FUB1	P25659	250 aa		4.73	□□□□□ -1.65
SNF8	YPL002C	GCD7	P32502	381 aa	Predicted RBP	4.73	□□□□□ -1.65
SNF8	YPL002C	SPC29	P33419	253 aa		4.73	□□□□□ -1.65
SNF8	YPL002C	RSP5	P39940	809 aa	Known RBP	4.73	□□□□□ -1.65
SNF8	YPL002C	YMR147W	P40218	223 aa	Known RBP	4.73	□□□□□ -1.65
SNF8	YPL002C	VPS27	P40343	622 aa	Known RBP	4.73	□□□□□ -1.65
SNF8	YPL002C	BAP3	P41815	604 aa		4.73	□□□□□ -1.65
SNF8	YPL002C	SHR5	P41912	237 aa		4.73	□□□□□ -1.65
SNF8	YPL002C	HUL5	P53119	910 aa		4.73	□□□□□ -1.65
SNF8	YPL002C	MET13	P53128	600 aa		4.73	□□□□□ -1.65
SNF8	YPL002C	MLC1	P53141	149 aa		4.73	□□□□□ -1.65
SNF8	YPL002C	SSL2	Q00578	843 aa		4.73	□□□□□ -1.65
SNF8	YPL002C	TMA64	Q04600	565 aa	Known RBP	4.73	□□□□□ -1.65
SNF8	YPL002C	YMR321C	Q04898	105 aa		4.73	□□□□□ -1.65
SNF8	YPL002C	ATG11	Q12527	1178 aa		4.73	□□□□□ -1.65
SNF8	YPL002C	DIF1	O13577	133 aa		4.72	□□□□□ -1.65
SNF8	YPL002C	CAN1	P04817	590 aa		4.72	□□□□□ -1.65
SNF8	YPL002C	TUB1	P09733	447 aa	Known RBP	4.72	□□□□□ -1.65
SNF8	YPL002C	URK1	P27515	501 aa		4.72	□□□□□ -1.65
SNF8	YPL002C	YBR259W	P38338	688 aa		4.72	□□□□□ -1.65
SNF8	YPL002C	CCT7	P42943	550 aa	Known RBP	4.72	□□□□□ -1.65
SNF8	YPL002C	IMO32	P53219	342 aa		4.72	□□□□□ -1.65
SNF8	YPL002C	LSB1	P53281	241 aa		4.72	□□□□□ -1.65
SNF8	YPL002C	SPO1	P53541	631 aa		4.72	□□□□□ -1.65
SNF8	YPL002C	FOL1	P53848	824 aa		4.72	□□□□□ -1.65
SNF8	YPL002C	SMX3	P54999	86 aa	Predicted RBP	4.72	□□□□□ -1.65
SNF8	YPL002C	YDR338C	Q05497	695 aa		4.72	□□□□□ -1.65
SNF8	YPL002C	MMR1	Q06324	491 aa		4.72	□□□□□ -1.65
SNF8	YPL002C	GUD1	Q07729	489 aa		4.72	□□□□□ -1.65
SNF8	YPL002C	FKS1	P38631	1876 aa	Known RBP	4.72	□□□□□ -1.65
SNF8	YPL002C	PDR18	P53756	1333 aa		4.71	□□□□□ -1.66
SNF8	YPL002C	COQ1	P18900	473 aa		4.7	□□□□□ -1.66
SNF8	YPL002C	ADY2	P25613	283 aa		4.7	□□□□□ -1.66
SNF8	YPL002C	TVP23	P38962	199 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms