RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W TDP1P38319 544 aa4.4□□□□□ -1.71
HSH49YOR319W YHR033WP38690 423 aa4.4□□□□□ -1.71
HSH49YOR319W YHR112CP38716 378 aa4.4□□□□□ -1.71
HSH49YOR319W BUD8P41698 603 aa4.4□□□□□ -1.71
HSH49YOR319W BIT61P47041 543 aa4.4□□□□□ -1.71
HSH49YOR319W YMR018WQ04364 514 aa4.4□□□□□ -1.71
HSH49YOR319W VPS36Q06696 566 aa4.4□□□□□ -1.71
HSH49YOR319W NDJ1Q12366 352 aa4.4□□□□□ -1.71
HSH49YOR319W DBP10Q12389 995 aaKnown RBP4.4□□□□□ -1.71
HSH49YOR319W MTF2P10849 440 aa4.39□□□□□ -1.71
HSH49YOR319W RNR1P21524 888 aaKnown RBP4.39□□□□□ -1.71
HSH49YOR319W KIN82P25341 720 aa4.39□□□□□ -1.71
HSH49YOR319W RER1P25560 188 aa4.39□□□□□ -1.71
HSH49YOR319W CWH43P25618 953 aa4.39□□□□□ -1.71
HSH49YOR319W CHS3P29465 1165 aa4.39□□□□□ -1.71
HSH49YOR319W PEX2P32800 271 aa4.39□□□□□ -1.71
HSH49YOR319W MFT1P33441 392 aaKnown RBP4.39□□□□□ -1.71
HSH49YOR319W STT3P39007 718 aaKnown RBP4.39□□□□□ -1.71
HSH49YOR319W MNT3P40549 630 aa4.39□□□□□ -1.71
HSH49YOR319W VPS73P53142 486 aaKnown RBP4.39□□□□□ -1.71
HSH49YOR319W MTL1P53214 551 aa4.39□□□□□ -1.71
HSH49YOR319W COX18P53239 316 aa4.39□□□□□ -1.71
HSH49YOR319W ARC35P53731 342 aaKnown RBP4.39□□□□□ -1.71
HSH49YOR319W YNR071CP53757 342 aa4.39□□□□□ -1.71
HSH49YOR319W SQS1P53866 767 aaKnown RBP4.39□□□□□ -1.71
HSH49YOR319W ENT2Q05785 613 aa4.39□□□□□ -1.71
HSH49YOR319W YKL033W-AQ86ZR7 236 aa4.39□□□□□ -1.71
HSH49YOR319W HMG2P12684 1045 aa4.38□□□□□ -1.71
HSH49YOR319W DMC1P25453 334 aa4.38□□□□□ -1.71
HSH49YOR319W PRE4P30657 266 aa4.38□□□□□ -1.71
HSH49YOR319W MVD1P32377 396 aaKnown RBP4.38□□□□□ -1.71
HSH49YOR319W MTC7P32633 139 aa4.38□□□□□ -1.71
HSH49YOR319W KAP123P40069 1113 aaKnown RBP4.38□□□□□ -1.71
HSH49YOR319W YNL195CP40168 261 aa4.38□□□□□ -1.71
HSH49YOR319W PRM2P40534 656 aa4.38□□□□□ -1.71
HSH49YOR319W SMK1P41808 388 aa4.38□□□□□ -1.71
HSH49YOR319W ESF2P53743 316 aaKnown RBP4.38□□□□□ -1.71
HSH49YOR319W SMX3P54999 86 aaPredicted RBP4.38□□□□□ -1.71
HSH49YOR319W DIN7Q12086 430 aa4.38□□□□□ -1.71
HSH49YOR319W HOS1Q12214 470 aa4.38□□□□□ -1.71
HSH49YOR319W POM34Q12445 299 aa4.38□□□□□ -1.71
HSH49YOR319W TUF1P02992 437 aaKnown RBP4.37□□□□□ -1.71
HSH49YOR319W RPS9BP05755 195 aaKnown RBP4.37□□□□□ -1.71
HSH49YOR319W SIR3P06701 978 aa4.37□□□□□ -1.71
HSH49YOR319W MIS1P09440 975 aaKnown RBP4.37□□□□□ -1.71
HSH49YOR319W SIR1P21691 654 aa4.37□□□□□ -1.71
HSH49YOR319W MCM3P24279 971 aaKnown RBP4.37□□□□□ -1.71
HSH49YOR319W RPT3P33298 428 aaKnown RBP4.37□□□□□ -1.71
HSH49YOR319W RRN3P36070 627 aa4.37□□□□□ -1.71
HSH49YOR319W FMO1P38866 432 aa4.37□□□□□ -1.71
HSH49YOR319W LYS9P38999 446 aa4.37□□□□□ -1.71
HSH49YOR319W NUP60P39705 539 aa4.37□□□□□ -1.71
HSH49YOR319W PUG1P40100 303 aa4.37□□□□□ -1.71
HSH49YOR319W FAF1P40546 346 aaPredicted RBP4.37□□□□□ -1.71
HSH49YOR319W NOP9P47077 666 aaKnown RBP4.37□□□□□ -1.71
HSH49YOR319W TAH11P47112 604 aa4.37□□□□□ -1.71
HSH49YOR319W PAN2P53010 1115 aaPredicted RBP4.37□□□□□ -1.71
HSH49YOR319W YRB30P53107 440 aaPredicted RBP4.37□□□□□ -1.71
HSH49YOR319W MEP3P53390 489 aa4.37□□□□□ -1.71
HSH49YOR319W MRPL13Q02204 264 aa4.37□□□□□ -1.71
HSH49YOR319W SUT2Q12286 268 aa4.37□□□□□ -1.71
HSH49YOR319W RTP1Q12751 981 aa4.37□□□□□ -1.71
HSH49YOR319W YOL087CQ99247 1116 aa4.37□□□□□ -1.71
HSH49YOR319W ECM3Q99252 613 aa4.37□□□□□ -1.71
HSH49YOR319W SEC15P22224 910 aa4.36□□□□□ -1.71
HSH49YOR319W IMP2'P32351 346 aa4.36□□□□□ -1.71
HSH49YOR319W PPZ2P33329 710 aa4.36□□□□□ -1.71
HSH49YOR319W SFB3P38810 929 aa4.36□□□□□ -1.71
HSH49YOR319W YJL206CP39529 758 aa4.36□□□□□ -1.71
HSH49YOR319W NDC80P40460 691 aa4.36□□□□□ -1.71
HSH49YOR319W TMA108P40462 946 aa4.36□□□□□ -1.71
HSH49YOR319W MDR1P53258 950 aa4.36□□□□□ -1.71
HSH49YOR319W MDM1Q01846 1127 aa4.36□□□□□ -1.71
HSH49YOR319W IWR1Q07532 353 aaPredicted RBP4.36□□□□□ -1.71
HSH49YOR319W CRD1Q07560 283 aa4.36□□□□□ -1.71
HSH49YOR319W AAD4Q07747 329 aa4.36□□□□□ -1.71
HSH49YOR319W DIA2Q08496 732 aaPredicted RBP4.36□□□□□ -1.71
HSH49YOR319W CLF1Q12309 687 aaPredicted RBP4.36□□□□□ -1.71
HSH49YOR319W HRP1Q99383 534 aaKnown RBP4.36□□□□□ -1.71
HSH49YOR319W URA3P03962 267 aa4.35□□□□□ -1.71
HSH49YOR319W POL3P15436 1097 aa4.35□□□□□ -1.71
HSH49YOR319W NCP1P16603 691 aaKnown RBP4.35□□□□□ -1.71
HSH49YOR319W UBC1P21734 215 aaKnown RBP4.35□□□□□ -1.71
HSH49YOR319W ARG1P22768 420 aa4.35□□□□□ -1.71
HSH49YOR319W PEX1P24004 1043 aa4.35□□□□□ -1.71
HSH49YOR319W SLC1P33333 303 aa4.35□□□□□ -1.71
HSH49YOR319W MPE1P35728 441 aaKnown RBP4.35□□□□□ -1.71
HSH49YOR319W MRPL36P36531 177 aa4.35□□□□□ -1.71
HSH49YOR319W NPR3P38742 1146 aa4.35□□□□□ -1.71
HSH49YOR319W GET2P40056 285 aa4.35□□□□□ -1.71
HSH49YOR319W ARG2P40360 574 aa4.35□□□□□ -1.71
HSH49YOR319W YIL166CP40445 542 aa4.35□□□□□ -1.71
HSH49YOR319W THI22Q06490 572 aa4.35□□□□□ -1.71
HSH49YOR319W YCG1Q06680 1035 aa4.35□□□□□ -1.71
HSH49YOR319W CSR1Q06705 408 aaKnown RBP4.35□□□□□ -1.71
HSH49YOR319W YDR056CQ12025 205 aa4.35□□□□□ -1.71
HSH49YOR319W AIM41Q12032 185 aa4.35□□□□□ -1.71
HSH49YOR319W NUC1P08466 329 aa4.34□□□□□ -1.71
HSH49YOR319W CLB4P24871 460 aa4.34□□□□□ -1.71
HSH49YOR319W ERG6P25087 383 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms