RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C RTT10Q08924 1013 aa9□□□□□ -0.97
PUP1YOR157C PUF2Q12221 1075 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
PUP1YOR157C JIP3O13555 125 aa8.99□□□□□ -0.97
PUP1YOR157C PAB1P04147 577 aaKnown RBP RIP-Chip data8.99□□□□□ -0.97 RIP-Chip
PUP1YOR157C PYC1P11154 1178 aaKnown RBP8.99□□□□□ -0.97
PUP1YOR157C OM45P16547 393 aa8.99□□□□□ -0.97
PUP1YOR157C YMC2P38087 329 aa8.99□□□□□ -0.97
PUP1YOR157C COP1P53622 1201 aaKnown RBP8.99□□□□□ -0.97
PUP1YOR157C THI73Q07904 523 aa8.99□□□□□ -0.97
PUP1YOR157C YLR046CQ12253 270 aa8.99□□□□□ -0.97
PUP1YOR157C YEL077CQ3E7X8 1277 aa8.99□□□□□ -0.97
PUP1YOR157C SPT15P13393 240 aaKnown RBP8.98□□□□□ -0.97
PUP1YOR157C DAL81P21657 970 aa8.98□□□□□ -0.97
PUP1YOR157C YIH1P25637 258 aa8.98□□□□□ -0.97
PUP1YOR157C STU2P46675 888 aa8.98□□□□□ -0.97
PUP1YOR157C COG7P53195 279 aa8.98□□□□□ -0.97
PUP1YOR157C LSC2P53312 427 aa8.98□□□□□ -0.97
PUP1YOR157C YDR444WQ04093 687 aa8.98□□□□□ -0.97
PUP1YOR157C AIM32Q04689 311 aa8.98□□□□□ -0.97
PUP1YOR157C YLR012CQ07927 99 aa8.98□□□□□ -0.97
PUP1YOR157C MAK16P10962 306 aaPredicted RBP8.97□□□□□ -0.97
PUP1YOR157C AEP2P22136 580 aa8.97□□□□□ -0.97
PUP1YOR157C GEX1P25596 615 aa8.97□□□□□ -0.97
PUP1YOR157C CSG2P35206 410 aa8.97□□□□□ -0.97
PUP1YOR157C GEX2P36173 615 aa8.97□□□□□ -0.97
PUP1YOR157C TAE1P38340 232 aa8.97□□□□□ -0.97
PUP1YOR157C RRP3P38712 501 aaKnown RBP8.97□□□□□ -0.97
PUP1YOR157C YEL075CP39972 122 aa8.97□□□□□ -0.97
PUP1YOR157C FIG4P42837 879 aa8.97□□□□□ -0.97
PUP1YOR157C AMA1P50082 593 aa8.97□□□□□ -0.97
PUP1YOR157C TAN1P53072 289 aaPredicted RBP8.97□□□□□ -0.97
PUP1YOR157C NPL3Q01560 414 aaKnown RBP RIP-Chip data8.97□□□□□ -0.97not detected
PUP1YOR157C PIR1Q03178 341 aa8.97□□□□□ -0.97
PUP1YOR157C PTI1P39927 425 aaPredicted RBP8.96□□□□□ -0.98
PUP1YOR157C GNT1Q12096 491 aa8.96□□□□□ -0.98
PUP1YOR157C CBR1P38626 284 aaKnown RBP8.95□□□□□ -0.98
PUP1YOR157C STL1P39932 569 aa8.95□□□□□ -0.98
PUP1YOR157C KTR7P40504 517 aa8.95□□□□□ -0.98
PUP1YOR157C NBP35P52920 328 aa8.95□□□□□ -0.98
PUP1YOR157C SSL1Q04673 461 aaPredicted RBP8.95□□□□□ -0.98
PUP1YOR157C EMP46Q12396 444 aa8.95□□□□□ -0.98
PUP1YOR157C HRP1Q99383 534 aaKnown RBP8.95□□□□□ -0.98
PUP1YOR157C SUC2P00724 532 aa8.94□□□□□ -0.98
PUP1YOR157C CWP1P28319 239 aa8.94□□□□□ -0.98
PUP1YOR157C ABD1P32783 436 aaPredicted RBP8.94□□□□□ -0.98
PUP1YOR157C PMT1P33775 817 aa8.94□□□□□ -0.98
PUP1YOR157C UBS1P38290 277 aa8.94□□□□□ -0.98
PUP1YOR157C DYS1P38791 387 aa8.94□□□□□ -0.98
PUP1YOR157C LAM1P38851 1228 aa8.94□□□□□ -0.98
PUP1YOR157C CNN1P43618 361 aa8.94□□□□□ -0.98
PUP1YOR157C DOS2P54858 310 aa8.94□□□□□ -0.98
PUP1YOR157C ATG10Q07879 167 aa8.94□□□□□ -0.98
PUP1YOR157C SRO7Q12038 1033 aa8.94□□□□□ -0.98
PUP1YOR157C YDR061WQ12298 539 aa8.94□□□□□ -0.98
PUP1YOR157C PPR1P07272 904 aaPredicted RBP8.93□□□□□ -0.98
PUP1YOR157C CYC8P14922 966 aa8.93□□□□□ -0.98
PUP1YOR157C SAC6P32599 642 aaKnown RBP8.93□□□□□ -0.98
PUP1YOR157C TYE7P33122 291 aaPredicted RBP8.93□□□□□ -0.98
PUP1YOR157C UBP14P38237 781 aaKnown RBP8.93□□□□□ -0.98
PUP1YOR157C HSL7P38274 827 aa8.93□□□□□ -0.98
PUP1YOR157C CTM1P38818 585 aa8.93□□□□□ -0.98
PUP1YOR157C AIM14P53109 570 aa8.93□□□□□ -0.98
PUP1YOR157C PRM1P53835 661 aa8.93□□□□□ -0.98
PUP1YOR157C SPP382Q06411 708 aaPredicted RBP8.93□□□□□ -0.98
PUP1YOR157C YOL073CQ08232 322 aa8.93□□□□□ -0.98
PUP1YOR157C ENO1P00924 437 aaKnown RBP8.92□□□□□ -0.98
PUP1YOR157C YER152CP10356 443 aa8.92□□□□□ -0.98
PUP1YOR157C MRP4P32902 394 aa8.92□□□□□ -0.98
PUP1YOR157C YKL151CP36059 337 aa8.92□□□□□ -0.98
PUP1YOR157C MUM2P38236 366 aa8.92□□□□□ -0.98
PUP1YOR157C YNR063WP53749 607 aa8.92□□□□□ -0.98
PUP1YOR157C KTR6P54070 446 aa8.92□□□□□ -0.98
PUP1YOR157C ENT2Q05785 613 aa8.92□□□□□ -0.98
PUP1YOR157C CSR1Q06705 408 aaKnown RBP8.92□□□□□ -0.98
PUP1YOR157C THI20Q08224 551 aa8.92□□□□□ -0.98
PUP1YOR157C TFB4Q12004 338 aa8.92□□□□□ -0.98
PUP1YOR157C PNS1Q12412 539 aa8.92□□□□□ -0.98
PUP1YOR157C RPL43AP0CX25 92 aaKnown RBP8.91□□□□□ -0.98
PUP1YOR157C RPL43BP0CX26 92 aa8.91□□□□□ -0.98
PUP1YOR157C ABF1P14164 731 aa8.91□□□□□ -0.98
PUP1YOR157C PTP1P25044 335 aa8.91□□□□□ -0.98
PUP1YOR157C QNS1P38795 714 aaKnown RBP8.91□□□□□ -0.98
PUP1YOR157C ELO1P39540 310 aa8.91□□□□□ -0.98
PUP1YOR157C COS5P47187 383 aa8.91□□□□□ -0.98
PUP1YOR157C MTO1P53070 669 aa8.91□□□□□ -0.98
PUP1YOR157C INA17Q02888 182 aa8.91□□□□□ -0.98
PUP1YOR157C ADI1Q03677 179 aa8.91□□□□□ -0.98
PUP1YOR157C ARA2Q04212 335 aa8.91□□□□□ -0.98
PUP1YOR157C YLR297WQ05899 129 aa8.91□□□□□ -0.98
PUP1YOR157C SKM1Q12469 655 aa8.91□□□□□ -0.98
PUP1YOR157C SBP1P10080 294 aaKnown RBP8.9□□□□□ -0.98
PUP1YOR157C POL30P15873 258 aaKnown RBP8.9□□□□□ -0.98
PUP1YOR157C GYP6P32806 458 aa8.9□□□□□ -0.98
PUP1YOR157C CYM1P32898 989 aa8.9□□□□□ -0.98
PUP1YOR157C RFT1P38206 574 aaPredicted RBP8.9□□□□□ -0.98
PUP1YOR157C GPR1Q12361 961 aa8.9□□□□□ -0.98
PUP1YOR157C MET16P18408 261 aaPredicted RBP8.89□□□□□ -0.99
PUP1YOR157C BEM1P29366 551 aa8.89□□□□□ -0.99
PUP1YOR157C MNT2P53059 558 aa8.89□□□□□ -0.99
PUP1YOR157C YOL036WQ08206 761 aa8.89□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 81.1 ms