RNA–Protein interactions for RNA: YNL294C

RIM21, Transcript of pH sensor molecule, component of the RIM101 pathway, yeast

Gene RIM21, Length 1,602 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM21	YNL294C	EDC3	P39998	551 aa	Known RBP	4.6	□□□□□ -1.67
RIM21	YNL294C	SER3	P40054	469 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	YER137C	P40083	148 aa	Known RBP	4.6	□□□□□ -1.67
RIM21	YNL294C	SPO22	P40511	975 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	HXT8	P40886	569 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	FAR7	P43592	221 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	CNN1	P43618	361 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	NOP9	P47077	666 aa	Known RBP	4.6	□□□□□ -1.67
RIM21	YNL294C	BRO1	P48582	844 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	RFX1	P48743	811 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	ATP22	P50273	684 aa	Predicted RBP	4.6	□□□□□ -1.67
RIM21	YNL294C	ZIP2	P53061	704 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	MRPL50	P53724	139 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	ARC35	P53731	342 aa	Known RBP	4.6	□□□□□ -1.67
RIM21	YNL294C	PGA2	P53903	129 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	HEF3	P53978	1044 aa	Known RBP	4.6	□□□□□ -1.67
RIM21	YNL294C	ORC4	P54791	529 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	SHE9	Q04172	456 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	TOS4	Q06266	489 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	LOT6	Q07923	191 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	TIP41	Q12199	356 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	RKR1	Q04781	1562 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	KRE5	P22023	1365 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	COQ4	O13525	335 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	IPP1	P00817	287 aa	Known RBP	4.59	□□□□□ -1.67
RIM21	YNL294C	ADE8	P04161	214 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	HOM3	P10869	527 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	MSD1	P15179	658 aa	Known RBP	4.59	□□□□□ -1.67
RIM21	YNL294C	PRP4	P20053	465 aa	Known RBP	4.59	□□□□□ -1.67
RIM21	YNL294C	MSB1	P21339	1137 aa	Known RBP	4.59	□□□□□ -1.67
RIM21	YNL294C	PGS1	P25578	521 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	RDS1	P25611	832 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	AAD3	P25612	363 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	KRE6	P32486	720 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	SFA1	P32771	386 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	YKL050C	P35736	922 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	RIP-Chip
RIM21	YNL294C	RTC3	P38804	111 aa	Predicted RBP	4.59	□□□□□ -1.67
RIM21	YNL294C	CCT6	P39079	546 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	YGR153W	P48238	217 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	VMA10	P48836	114 aa	Known RBP	4.59	□□□□□ -1.67
RIM21	YNL294C	MCM6	P53091	1017 aa	Known RBP	4.59	□□□□□ -1.67
RIM21	YNL294C	YGR054W	P53235	642 aa	Known RBP	4.59	□□□□□ -1.67
RIM21	YNL294C	ZPR1	P53303	486 aa	Known RBP	4.59	□□□□□ -1.67
RIM21	YNL294C	GOR1	P53839	350 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	RPM2	Q02773	1202 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	ATP25	Q03153	612 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	HER2	Q03557	464 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	WAR1	Q03631	944 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	HFD1	Q04458	532 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	GRC3	Q07845	632 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	DIS3	Q08162	1001 aa	Known RBP	4.59	□□□□□ -1.67
RIM21	YNL294C	OXR1	Q08952	273 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	NUR1	Q12066	484 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	DDP1	Q99321	188 aa	Known RBP	4.59	□□□□□ -1.67
RIM21	YNL294C	Q0182	Q9ZZW1	134 aa		4.59	□□□□□ -1.67
RIM21	YNL294C	UTP10	P42945	1769 aa	Known RBP	4.59	□□□□□ -1.68
RIM21	YNL294C	POM152	P39685	1337 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	RAP1	P11938	827 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
RIM21	YNL294C	VMA2	P16140	517 aa	Known RBP	4.58	□□□□□ -1.68
RIM21	YNL294C	CKA2	P19454	339 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	RAD53	P22216	821 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	DAL80	P26343	269 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	SIN4	P32259	974 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	SRP40	P32583	406 aa	Predicted RBP	4.58	□□□□□ -1.68
RIM21	YNL294C	PEX6	P33760	1030 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	STO1	P34160	861 aa	Known RBP	4.58	□□□□□ -1.68
RIM21	YNL294C	SQT1	P35184	431 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	TYS1	P36421	394 aa	Known RBP	4.58	□□□□□ -1.68
RIM21	YNL294C	MAL33	P38157	468 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	GIP1	P38229	639 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	YBR225W	P38321	900 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	CCT3	P39077	534 aa	Known RBP	4.58	□□□□□ -1.68
RIM21	YNL294C	AST2	P39945	430 aa	Known RBP	4.58	□□□□□ -1.68
RIM21	YNL294C	AGE2	P40529	298 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	UBP6	P43593	499 aa	Known RBP	4.58	□□□□□ -1.68
RIM21	YNL294C	BNA6	P43619	295 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	BNA3	P47039	444 aa	Known RBP	4.58	□□□□□ -1.68
RIM21	YNL294C	YJL049W	P47048	450 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	MAL11	P53048	616 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	YGR122W	P53272	402 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	YNL165W	P53891	406 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	ALF1	P53904	254 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	MMT1	Q03218	510 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	USA1	Q03714	838 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	RPN9	Q04062	393 aa	Known RBP	4.58	□□□□□ -1.68
RIM21	YNL294C	NSE3	Q05541	303 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	GLO2	Q05584	274 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	ESF1	Q06344	628 aa	Known RBP	4.58	□□□□□ -1.68
RIM21	YNL294C	ADY3	Q07732	790 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
RIM21	YNL294C	YEH2	Q07950	538 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	DAS2	Q12084	232 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	SNU23	Q12368	194 aa	Predicted RBP	4.58	□□□□□ -1.68
RIM21	YNL294C	YSP2	Q06681	1438 aa		4.58	□□□□□ -1.68
RIM21	YNL294C	NCP1	P16603	691 aa	Known RBP	4.57	□□□□□ -1.68
RIM21	YNL294C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
RIM21	YNL294C	SFL1	P20134	766 aa		4.57	□□□□□ -1.68
RIM21	YNL294C	PRP5	P21372	849 aa	Predicted RBP	4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms