RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDP1	YNL039W	COX17	Q12287	69 aa		5.11	□□□□□ -1.59
BDP1	YNL039W	SKM1	Q12469	655 aa		5.11	□□□□□ -1.59
BDP1	YNL039W	CYC1	P00044	109 aa	Predicted RBP	5.11	□□□□□ -1.59
BDP1	YNL039W	GAL10	P04397	699 aa		5.11	□□□□□ -1.59
BDP1	YNL039W	RNR1	P21524	888 aa	Known RBP	5.11	□□□□□ -1.59
BDP1	YNL039W	MCX1	P38323	520 aa	Predicted RBP	5.11	□□□□□ -1.59
BDP1	YNL039W	MSS4	P38994	779 aa		5.11	□□□□□ -1.59
BDP1	YNL039W	NPR2	P39923	615 aa		5.11	□□□□□ -1.59
BDP1	YNL039W	YJR061W	P40355	935 aa		5.11	□□□□□ -1.59
BDP1	YNL039W	SIP4	P46954	829 aa		5.11	□□□□□ -1.59
BDP1	YNL039W	POL31	P46957	487 aa		5.11	□□□□□ -1.59
BDP1	YNL039W	YML6	P51998	286 aa		5.11	□□□□□ -1.59
BDP1	YNL039W	SPO1	P53541	631 aa		5.11	□□□□□ -1.59
BDP1	YNL039W	ERO1	Q03103	563 aa		5.11	□□□□□ -1.59
BDP1	YNL039W	NBP2	Q12163	236 aa		5.11	□□□□□ -1.59
BDP1	YNL039W	PCD1	Q12524	340 aa		5.11	□□□□□ -1.59
BDP1	YNL039W	TUF1	P02992	437 aa	Known RBP	5.1	□□□□□ -1.59
BDP1	YNL039W	RED1	P14291	827 aa		5.1	□□□□□ -1.59
BDP1	YNL039W	CKA1	P15790	372 aa		5.1	□□□□□ -1.59
BDP1	YNL039W	KIN82	P25341	720 aa		5.1	□□□□□ -1.59
BDP1	YNL039W	CTF13	P35203	478 aa		5.1	□□□□□ -1.59
BDP1	YNL039W	CDS1	P38221	457 aa		5.1	□□□□□ -1.59
BDP1	YNL039W	AXL1	P40851	1208 aa		5.1	□□□□□ -1.59
BDP1	YNL039W	ARF3	P40994	183 aa	RIP-Chip data	5.1	□□□□□ -1.59	not detected
BDP1	YNL039W	CIR1	P42940	261 aa		5.1	□□□□□ -1.59
BDP1	YNL039W	MET12	P46151	657 aa		5.1	□□□□□ -1.59
BDP1	YNL039W	MEH1	Q02205	184 aa		5.1	□□□□□ -1.59
BDP1	YNL039W	SEC21	P32074	935 aa	Known RBP	5.09	□□□□□ -1.59
BDP1	YNL039W	BYE1	P36106	594 aa		5.09	□□□□□ -1.59
BDP1	YNL039W	MUM2	P38236	366 aa		5.09	□□□□□ -1.59
BDP1	YNL039W	VFA1	P40080	203 aa		5.09	□□□□□ -1.59
BDP1	YNL039W	NOP9	P47077	666 aa	Known RBP	5.09	□□□□□ -1.59
BDP1	YNL039W	YDL183C	P48569	320 aa		5.09	□□□□□ -1.59
BDP1	YNL039W	YPL071C	Q02864	156 aa		5.09	□□□□□ -1.59
BDP1	YNL039W	VPS64	Q03944	604 aa		5.09	□□□□□ -1.59
BDP1	YNL039W	ADY4	Q05955	493 aa		5.09	□□□□□ -1.59
BDP1	YNL039W	GCN4	P03069	281 aa		5.09	□□□□□ -1.6
BDP1	YNL039W	RPS9B	P05755	195 aa	Known RBP	5.09	□□□□□ -1.6
BDP1	YNL039W	RPL19A	P0CX82	189 aa	Known RBP	5.09	□□□□□ -1.6
BDP1	YNL039W	RPL19B	P0CX83	189 aa	Predicted RBP	5.09	□□□□□ -1.6
BDP1	YNL039W	RPC53	P25441	422 aa		5.09	□□□□□ -1.6
BDP1	YNL039W	ECM32	P32644	1121 aa	Known RBP	5.09	□□□□□ -1.6
BDP1	YNL039W	SRP72	P38688	640 aa	Known RBP	5.09	□□□□□ -1.6
BDP1	YNL039W	ARC1	P46672	376 aa	Known RBP	5.09	□□□□□ -1.6
BDP1	YNL039W	DUO1	P53168	247 aa	Known RBP	5.09	□□□□□ -1.6
BDP1	YNL039W	YGR035C	P53222	116 aa		5.09	□□□□□ -1.6
BDP1	YNL039W	TRS31	Q03337	283 aa		5.09	□□□□□ -1.6
BDP1	YNL039W	GPB1	Q08886	897 aa		5.09	□□□□□ -1.6
BDP1	YNL039W	ICL2	Q12031	575 aa		5.09	□□□□□ -1.6
BDP1	YNL039W	LPX1	Q12405	387 aa	Known RBP	5.09	□□□□□ -1.6
BDP1	YNL039W	POM34	Q12445	299 aa		5.09	□□□□□ -1.6
BDP1	YNL039W	PGA3	Q12746	312 aa	Known RBP	5.09	□□□□□ -1.6
BDP1	YNL039W	SMC6	Q12749	1114 aa		5.09	□□□□□ -1.6
BDP1	YNL039W	PRP45	P28004	379 aa	Predicted RBP	5.08	□□□□□ -1.6
BDP1	YNL039W	MTH1	P35198	433 aa		5.08	□□□□□ -1.6
BDP1	YNL039W	SFB3	P38810	929 aa		5.08	□□□□□ -1.6
BDP1	YNL039W	UTP9	P38882	575 aa	Known RBP	5.08	□□□□□ -1.6
BDP1	YNL039W	CRG1	P38892	291 aa	RIP-Chip data	5.08	□□□□□ -1.6	not detected
BDP1	YNL039W	FTR1	P40088	404 aa		5.08	□□□□□ -1.6
BDP1	YNL039W	COG1	P53079	417 aa		5.08	□□□□□ -1.6
BDP1	YNL039W	NCS6	P53088	359 aa		5.08	□□□□□ -1.6
BDP1	YNL039W	TDA6	Q06466	467 aa		5.08	□□□□□ -1.6
BDP1	YNL039W	AIM41	Q12032	185 aa		5.08	□□□□□ -1.6
BDP1	YNL039W	HUA2	Q12134	243 aa		5.08	□□□□□ -1.6
BDP1	YNL039W	SFI1	Q12369	946 aa		5.08	□□□□□ -1.6
BDP1	YNL039W	ECM3	Q99252	613 aa		5.08	□□□□□ -1.6
BDP1	YNL039W	YLR302C	O13544	120 aa		5.07	□□□□□ -1.6
BDP1	YNL039W	ARG3	P05150	338 aa		5.07	□□□□□ -1.6
BDP1	YNL039W	HIS5	P07172	385 aa		5.07	□□□□□ -1.6
BDP1	YNL039W	CDC24	P11433	854 aa	Predicted RBP	5.07	□□□□□ -1.6
BDP1	YNL039W	PDX1	P16451	410 aa		5.07	□□□□□ -1.6
BDP1	YNL039W	VPH1	P32563	840 aa	Known RBP	5.07	□□□□□ -1.6
BDP1	YNL039W	PGM1	P33401	570 aa	Known RBP	5.07	□□□□□ -1.6
BDP1	YNL039W	LRP1	P38801	184 aa	Known RBP	5.07	□□□□□ -1.6
BDP1	YNL039W	LSM5	P40089	93 aa	Known RBP	5.07	□□□□□ -1.6
BDP1	YNL039W	IST3	P40565	148 aa	Predicted RBP	5.07	□□□□□ -1.6
BDP1	YNL039W	YOR111W	Q99210	232 aa		5.07	□□□□□ -1.6
BDP1	YNL039W	MET17	P06106	444 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	SEC53	P07283	254 aa	Known RBP	5.06	□□□□□ -1.6
BDP1	YNL039W	GCD1	P09032	578 aa	Predicted RBP	5.06	□□□□□ -1.6
BDP1	YNL039W	SEC15	P22224	910 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	ERG6	P25087	383 aa	Known RBP	5.06	□□□□□ -1.6
BDP1	YNL039W	RPS7A	P26786	190 aa	Known RBP	5.06	□□□□□ -1.6
BDP1	YNL039W	DBF4	P32325	704 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	ERG3	P32353	365 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	COQ2	P32378	372 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	MRP20	P32387	263 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	MAC1	P35192	417 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	YEL025C	P39991	1188 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	CHA4	P43634	648 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	GCV2	P49095	1034 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	GTF1	P53260	183 aa	Predicted RBP	5.06	□□□□□ -1.6
BDP1	YNL039W	RPT6	Q01939	405 aa	Known RBP	5.06	□□□□□ -1.6
BDP1	YNL039W	YSA1	Q01976	231 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	RCO1	Q04779	684 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	AIM6	Q07716	390 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	DIA2	Q08496	732 aa	Predicted RBP	5.06	□□□□□ -1.6
BDP1	YNL039W	SUL2	Q12325	893 aa		5.06	□□□□□ -1.6
BDP1	YNL039W	HRP1	Q99383	534 aa	Known RBP	5.06	□□□□□ -1.6
BDP1	YNL039W	TUB2	P02557	457 aa	Known RBP	5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms