RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W AIM32Q04689 311 aa10.37□□□□□ -0.75
SHH4YLR164W FMP25Q08023 583 aa10.37□□□□□ -0.75
SHH4YLR164W CCP1P00431 361 aa10.36□□□□□ -0.75
SHH4YLR164W ARG4P04076 463 aaPredicted RBP10.36□□□□□ -0.75
SHH4YLR164W RPL17AP05740 184 aaKnown RBP10.36□□□□□ -0.75
SHH4YLR164W RAD1P06777 1100 aa10.36□□□□□ -0.75
SHH4YLR164W SPE1P08432 466 aa10.36□□□□□ -0.75
SHH4YLR164W KGD2P19262 463 aaPredicted RBP10.36□□□□□ -0.75
SHH4YLR164W PDE1P22434 369 aa10.36□□□□□ -0.75
SHH4YLR164W DAL1P32375 460 aa10.36□□□□□ -0.75
SHH4YLR164W MVP1P40959 511 aaKnown RBP10.36□□□□□ -0.75
SHH4YLR164W RPL17BP46990 184 aaKnown RBP10.36□□□□□ -0.75
SHH4YLR164W MCM6P53091 1017 aaKnown RBP10.36□□□□□ -0.75
SHH4YLR164W YNL247WP53852 767 aaKnown RBP10.36□□□□□ -0.75
SHH4YLR164W MTD1Q02046 320 aaKnown RBP10.36□□□□□ -0.75
SHH4YLR164W HEH2Q03281 663 aa10.36□□□□□ -0.75
SHH4YLR164W MPC54Q08550 464 aa10.36□□□□□ -0.75
SHH4YLR164W ARP7Q12406 477 aa10.36□□□□□ -0.75
SHH4YLR164W MET16P18408 261 aaPredicted RBP10.35□□□□□ -0.75
SHH4YLR164W RGR1P19263 1082 aa10.35□□□□□ -0.75
SHH4YLR164W YIH1P25637 258 aa10.35□□□□□ -0.75
SHH4YLR164W MGT1P26188 188 aa10.35□□□□□ -0.75
SHH4YLR164W NFU1P32860 256 aa10.35□□□□□ -0.75
SHH4YLR164W POP4P38336 279 aa10.35□□□□□ -0.75
SHH4YLR164W RGD2P43556 714 aa10.35□□□□□ -0.75
SHH4YLR164W VPS25P47142 202 aa10.35□□□□□ -0.75
SHH4YLR164W PEX31P53203 462 aa10.35□□□□□ -0.75
SHH4YLR164W YGR127WP53275 312 aa10.35□□□□□ -0.75
SHH4YLR164W YNL034WP53963 612 aa10.35□□□□□ -0.75
SHH4YLR164W YNL018CP53976 612 aa10.35□□□□□ -0.75
SHH4YLR164W APC5Q08683 685 aa10.35□□□□□ -0.75
SHH4YLR164W AVL9Q12500 764 aa10.35□□□□□ -0.75
SHH4YLR164W HEM15P16622 393 aa10.34□□□□□ -0.75
SHH4YLR164W RAD16P31244 790 aa10.34□□□□□ -0.75
SHH4YLR164W PTC3P34221 468 aaKnown RBP10.34□□□□□ -0.75
SHH4YLR164W YBP1P38315 674 aa10.34□□□□□ -0.75
SHH4YLR164W FSH1P38777 243 aaKnown RBP10.34□□□□□ -0.75
SHH4YLR164W AIM18P38884 321 aa10.34□□□□□ -0.75
SHH4YLR164W SMX2P40204 77 aaKnown RBP10.34□□□□□ -0.75
SHH4YLR164W ATM1P40416 690 aa10.34□□□□□ -0.75
SHH4YLR164W RFX1P48743 811 aa10.34□□□□□ -0.75
SHH4YLR164W RPL22BP56628 122 aaKnown RBP10.34□□□□□ -0.75
SHH4YLR164W PIR3Q03180 325 aa10.34□□□□□ -0.75
SHH4YLR164W YLR257WQ06146 321 aaKnown RBP10.34□□□□□ -0.75
SHH4YLR164W AAD4Q07747 329 aa10.34□□□□□ -0.75
SHH4YLR164W NDJ1Q12366 352 aa10.34□□□□□ -0.75
SHH4YLR164W CMD1P06787 147 aaKnown RBP10.33□□□□□ -0.76
SHH4YLR164W RPB2P08518 1224 aaKnown RBP10.33□□□□□ -0.76
SHH4YLR164W SSP1P38871 571 aa10.33□□□□□ -0.76
SHH4YLR164W INA22P40576 216 aa10.33□□□□□ -0.76
SHH4YLR164W CNN1P43618 361 aa10.33□□□□□ -0.76
SHH4YLR164W SNG1P46950 547 aa10.33□□□□□ -0.76
SHH4YLR164W YJR039WP47107 1121 aa10.33□□□□□ -0.76
SHH4YLR164W HLJ1P48353 224 aa10.33□□□□□ -0.76
SHH4YLR164W USA1Q03714 838 aa10.33□□□□□ -0.76
SHH4YLR164W SND1Q04007 877 aa10.33□□□□□ -0.76
SHH4YLR164W CDC73Q06697 393 aa10.33□□□□□ -0.76
SHH4YLR164W TPO1Q07824 586 aa10.33□□□□□ -0.76
SHH4YLR164W CBC2Q08920 208 aaKnown RBP RIP-Chip data10.33□□□□□ -0.76not detected
SHH4YLR164W YPQ1Q12010 308 aa10.33□□□□□ -0.76
SHH4YLR164W HSF1P10961 833 aa10.32□□□□□ -0.76
SHH4YLR164W SPO16P17122 198 aa10.32□□□□□ -0.76
SHH4YLR164W CDC20P26309 610 aa10.32□□□□□ -0.76
SHH4YLR164W TSA1P34760 196 aaKnown RBP10.32□□□□□ -0.76
SHH4YLR164W CDC27P38042 758 aa10.32□□□□□ -0.76
SHH4YLR164W RGD1P38339 666 aa10.32□□□□□ -0.76
SHH4YLR164W BIT2P38346 545 aa10.32□□□□□ -0.76
SHH4YLR164W DIA4P38705 446 aaPredicted RBP10.32□□□□□ -0.76
SHH4YLR164W PPE1P38796 400 aa10.32□□□□□ -0.76
SHH4YLR164W CCT2P39076 527 aaKnown RBP10.32□□□□□ -0.76
SHH4YLR164W PRM9P39551 298 aa10.32□□□□□ -0.76
SHH4YLR164W STL1P39932 569 aa10.32□□□□□ -0.76
SHH4YLR164W KTR7P40504 517 aa10.32□□□□□ -0.76
SHH4YLR164W CTK3P46963 296 aaPredicted RBP10.32□□□□□ -0.76
SHH4YLR164W TAH11P47112 604 aa10.32□□□□□ -0.76
SHH4YLR164W YMR160WQ03823 816 aa10.32□□□□□ -0.76
SHH4YLR164W BSP1Q06604 576 aa10.32□□□□□ -0.76
SHH4YLR164W PMT7Q06644 662 aa10.32□□□□□ -0.76
SHH4YLR164W YOR387CQ08910 206 aa10.32□□□□□ -0.76
SHH4YLR164W YOR223WQ12015 292 aa10.32□□□□□ -0.76
SHH4YLR164W YLL056CQ12177 298 aa10.32□□□□□ -0.76
SHH4YLR164W MNL2Q12205 849 aa10.32□□□□□ -0.76
SHH4YLR164W GPM3Q12326 303 aa10.32□□□□□ -0.76
SHH4YLR164W YDR034W-BQ6Q5X2 51 aa10.32□□□□□ -0.76
SHH4YLR164W AI5_ALPHAQ9ZZX1 630 aa10.32□□□□□ -0.76
SHH4YLR164W UTR2P32623 467 aa10.31□□□□□ -0.76
SHH4YLR164W URA8P38627 578 aaPredicted RBP10.31□□□□□ -0.76
SHH4YLR164W LAM1P38851 1228 aa10.31□□□□□ -0.76
SHH4YLR164W EDC3P39998 551 aaKnown RBP10.31□□□□□ -0.76
SHH4YLR164W ALA1P40825 983 aaKnown RBP10.31□□□□□ -0.76
SHH4YLR164W UTP8P53276 713 aaKnown RBP10.31□□□□□ -0.76
SHH4YLR164W NRD1P53617 575 aaKnown RBP RIP-Chip data10.31□□□□□ -0.76not detected
SHH4YLR164W TRM112P53738 135 aaPredicted RBP10.31□□□□□ -0.76
SHH4YLR164W SPO71Q03868 1245 aa10.31□□□□□ -0.76
SHH4YLR164W STE23Q06010 1027 aa10.31□□□□□ -0.76
SHH4YLR164W LPX1Q12405 387 aaKnown RBP10.31□□□□□ -0.76
SHH4YLR164W ADH4P10127 382 aa10.3□□□□□ -0.76
SHH4YLR164W POL3P15436 1097 aa10.3□□□□□ -0.76
SHH4YLR164W IDI1P15496 288 aa10.3□□□□□ -0.76
SHH4YLR164W ADY2P25613 283 aa10.3□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms