RNA–Protein interactions for RNA: YLR120C

YPS1, Transcript of Aspartic protease, yeast

Gene YPS1, Length 1,710 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS1	YLR120C	YPL109C	Q02981	657 aa		13.1	□□□□□ -0.31
YPS1	YLR120C	VPS3	P23643	1011 aa		13.1	□□□□□ -0.31
YPS1	YLR120C	BUD2	P33314	1104 aa		13.1	□□□□□ -0.31
YPS1	YLR120C	NMD3	P38861	518 aa	Known RBP	13.1	□□□□□ -0.31
YPS1	YLR120C	BIO4	P53630	237 aa		13.1	□□□□□ -0.31
YPS1	YLR120C	ULP1	Q02724	621 aa		13.1	□□□□□ -0.31
YPS1	YLR120C	RSA4	P25382	515 aa	Known RBP	13.09	□□□□□ -0.31
YPS1	YLR120C	AAD3	P25612	363 aa		13.09	□□□□□ -0.31
YPS1	YLR120C	CYS3	P31373	394 aa	Known RBP	13.09	□□□□□ -0.31
YPS1	YLR120C	HEL1	P36113	551 aa		13.09	□□□□□ -0.31
YPS1	YLR120C	PFK26	P40433	827 aa	Known RBP	13.09	□□□□□ -0.31
YPS1	YLR120C	INP51	P40559	946 aa	Known RBP	13.09	□□□□□ -0.31
YPS1	YLR120C	RFX1	P48743	811 aa		13.09	□□□□□ -0.31
YPS1	YLR120C	BUD22	Q04347	519 aa	Known RBP	13.09	□□□□□ -0.31
YPS1	YLR120C	ALR1	Q08269	859 aa		13.09	□□□□□ -0.31
YPS1	YLR120C	YOR022C	Q12204	715 aa		13.09	□□□□□ -0.31
YPS1	YLR120C	OXP1	P28273	1286 aa		13.08	□□□□□ -0.32
YPS1	YLR120C	ALD5	P40047	520 aa	Known RBP	13.08	□□□□□ -0.32
YPS1	YLR120C	SIP5	P40210	489 aa	Known RBP	13.08	□□□□□ -0.32
YPS1	YLR120C	AZR1	P50080	613 aa		13.08	□□□□□ -0.32
YPS1	YLR120C	ALT2	P52892	507 aa		13.08	□□□□□ -0.32
YPS1	YLR120C	YLR177W	Q06251	628 aa		13.08	□□□□□ -0.32
YPS1	YLR120C	GPM3	Q12326	303 aa		13.08	□□□□□ -0.32
YPS1	YLR120C	YOR131C	Q12486	218 aa		13.08	□□□□□ -0.32
YPS1	YLR120C	SHE3	P38272	425 aa	Known RBP	13.08	□□□□□ -0.32
YPS1	YLR120C	GCV2	P49095	1034 aa		13.08	□□□□□ -0.32
YPS1	YLR120C	TEP1	P53916	434 aa		13.08	□□□□□ -0.32
YPS1	YLR120C	YPT6	Q99260	215 aa		13.08	□□□□□ -0.32
YPS1	YLR120C	RAD5	P32849	1169 aa	Predicted RBP	13.07	□□□□□ -0.32
YPS1	YLR120C	MND2	P40577	368 aa		13.07	□□□□□ -0.32
YPS1	YLR120C	SKY1	Q03656	742 aa		13.07	□□□□□ -0.32
YPS1	YLR120C	YMR160W	Q03823	816 aa		13.07	□□□□□ -0.32
YPS1	YLR120C	CUE5	Q08412	411 aa	Known RBP	13.07	□□□□□ -0.32
YPS1	YLR120C	RPC19	P28000	142 aa	Known RBP	13.06	□□□□□ -0.32
YPS1	YLR120C	CSE2	P33308	149 aa		13.06	□□□□□ -0.32
YPS1	YLR120C	KES1	P35844	434 aa	Known RBP	13.06	□□□□□ -0.32
YPS1	YLR120C	YHL026C	P38740	315 aa		13.06	□□□□□ -0.32
YPS1	YLR120C	ERP5	P38819	212 aa		13.06	□□□□□ -0.32
YPS1	YLR120C	AIM18	P38884	321 aa		13.06	□□□□□ -0.32
YPS1	YLR120C	RRT5	P43607	289 aa		13.06	□□□□□ -0.32
YPS1	YLR120C	SLT2	Q00772	484 aa		13.06	□□□□□ -0.32
YPS1	YLR120C	STP1	Q00947	519 aa		13.06	□□□□□ -0.32
YPS1	YLR120C	ADI1	Q03677	179 aa		13.06	□□□□□ -0.32
YPS1	YLR120C	AI5_ALPHA	Q9ZZX1	630 aa		13.06	□□□□□ -0.32
YPS1	YLR120C	RAD3	P06839	778 aa		13.05	□□□□□ -0.32
YPS1	YLR120C	RNA1	P11745	407 aa	Known RBP	13.05	□□□□□ -0.32
YPS1	YLR120C	PSE1	P32337	1089 aa	Known RBP	13.05	□□□□□ -0.32
YPS1	YLR120C	STE13	P33894	931 aa		13.05	□□□□□ -0.32
YPS1	YLR120C	COY1	P34237	679 aa		13.05	□□□□□ -0.32
YPS1	YLR120C	YJL107C	P42947	387 aa		13.05	□□□□□ -0.32
YPS1	YLR120C	INA17	Q02888	182 aa		13.05	□□□□□ -0.32
YPS1	YLR120C	SND1	Q04007	877 aa		13.05	□□□□□ -0.32
YPS1	YLR120C	RCL1	Q08096	367 aa	Predicted RBP	13.05	□□□□□ -0.32
YPS1	YLR120C	TPK1	P06244	397 aa		13.05	□□□□□ -0.32
YPS1	YLR120C	TIF1	P10081	395 aa	Known RBP	13.05	□□□□□ -0.32
YPS1	YLR120C	GPA2	P10823	449 aa		13.05	□□□□□ -0.32
YPS1	YLR120C	VAN1	P23642	535 aa		13.05	□□□□□ -0.32
YPS1	YLR120C	POL31	P46957	487 aa		13.05	□□□□□ -0.32
YPS1	YLR120C	PAN2	P53010	1115 aa	Predicted RBP	13.05	□□□□□ -0.32
YPS1	YLR120C	YPR003C	P53394	754 aa		13.05	□□□□□ -0.32
YPS1	YLR120C	MDM20	Q12387	796 aa	Known RBP	13.05	□□□□□ -0.32
YPS1	YLR120C	TSR4	P25040	408 aa		13.04	□□□□□ -0.32
YPS1	YLR120C	MCM5	P29496	775 aa	Known RBP	13.04	□□□□□ -0.32
YPS1	YLR120C	ILM1	P47155	203 aa		13.04	□□□□□ -0.32
YPS1	YLR120C	PEX31	P53203	462 aa		13.04	□□□□□ -0.32
YPS1	YLR120C	NNF2	P53253	936 aa		13.04	□□□□□ -0.32
YPS1	YLR120C	YGR127W	P53275	312 aa		13.04	□□□□□ -0.32
YPS1	YLR120C	RCR2	Q03446	210 aa	Known RBP	13.04	□□□□□ -0.32
YPS1	YLR120C	DDC1	Q08949	612 aa		13.04	□□□□□ -0.32
YPS1	YLR120C	REC8	Q12188	680 aa		13.04	□□□□□ -0.32
YPS1	YLR120C	SPE4	Q12455	300 aa		13.04	□□□□□ -0.32
YPS1	YLR120C	GAL80	P04387	435 aa		13.03	□□□□□ -0.32
YPS1	YLR120C	URA10	P30402	227 aa		13.03	□□□□□ -0.32
YPS1	YLR120C	PAH1	P32567	862 aa		13.03	□□□□□ -0.32
YPS1	YLR120C	SSE1	P32589	693 aa	Known RBP	13.03	□□□□□ -0.32
YPS1	YLR120C	TOA1	P32773	286 aa		13.03	□□□□□ -0.32
YPS1	YLR120C	TVP23	P38962	199 aa		13.03	□□□□□ -0.32
YPS1	YLR120C	STL1	P39932	569 aa		13.03	□□□□□ -0.32
YPS1	YLR120C	MAF1	P41910	395 aa		13.03	□□□□□ -0.32
YPS1	YLR120C	TFB2	Q02939	513 aa		13.03	□□□□□ -0.32
YPS1	YLR120C	OSW1	Q08692	278 aa		13.03	□□□□□ -0.32
YPS1	YLR120C	SLP1	Q12232	587 aa		13.03	□□□□□ -0.32
YPS1	YLR120C	ERR1	P0CX10	437 aa		13.02	□□□□□ -0.32
YPS1	YLR120C	ERR2	P0CX11	437 aa		13.02	□□□□□ -0.32
YPS1	YLR120C	YJL206C	P39529	758 aa		13.02	□□□□□ -0.32
YPS1	YLR120C	ERR3	P42222	437 aa		13.02	□□□□□ -0.32
YPS1	YLR120C	MNN11	P46985	422 aa	Known RBP	13.02	□□□□□ -0.32
YPS1	YLR120C	VPS62	P53285	467 aa		13.02	□□□□□ -0.32
YPS1	YLR120C	SPC98	P53540	846 aa		13.02	□□□□□ -0.32
YPS1	YLR120C	YPL062W	Q02781	134 aa		13.02	□□□□□ -0.32
YPS1	YLR120C	YSH1	Q06224	779 aa	Predicted RBP	13.02	□□□□□ -0.32
YPS1	YLR120C	APC5	Q08683	685 aa		13.02	□□□□□ -0.32
YPS1	YLR120C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	13.02	□□□□□ -0.32	not detected
YPS1	YLR120C	CIT2	P08679	460 aa		13.02	□□□□□ -0.33
YPS1	YLR120C	GID7	P25569	745 aa		13.02	□□□□□ -0.33
YPS1	YLR120C	HEM3	P28789	327 aa		13.02	□□□□□ -0.33
YPS1	YLR120C	BIT2	P38346	545 aa		13.02	□□□□□ -0.33
YPS1	YLR120C	RFC3	P38629	340 aa		13.02	□□□□□ -0.33
YPS1	YLR120C	PRK1	P40494	810 aa		13.02	□□□□□ -0.33
YPS1	YLR120C	YFL012W	P43580	148 aa		13.02	□□□□□ -0.33

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms