RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	YMR084W	A2P2R3	262 aa		3.25	□□□□□ -1.89
SPE1	YKL184W	HEM1	P09950	548 aa	Predicted RBP	3.25	□□□□□ -1.89
SPE1	YKL184W	CDC26	P14724	124 aa		3.25	□□□□□ -1.89
SPE1	YKL184W	APN1	P22936	367 aa		3.25	□□□□□ -1.89
SPE1	YKL184W	BRN1	P38170	754 aa		3.25	□□□□□ -1.89
SPE1	YKL184W	CDS1	P38221	457 aa		3.25	□□□□□ -1.89
SPE1	YKL184W	SRP68	P38687	599 aa	Known RBP	3.25	□□□□□ -1.89
SPE1	YKL184W	YJL193W	P39542	402 aa		3.25	□□□□□ -1.89
SPE1	YKL184W	XBP1	P40489	647 aa		3.25	□□□□□ -1.89
SPE1	YKL184W	DUG1	P43616	481 aa	Known RBP	3.25	□□□□□ -1.89
SPE1	YKL184W	MDR1	P53258	950 aa		3.25	□□□□□ -1.89
SPE1	YKL184W	SKY1	Q03656	742 aa		3.25	□□□□□ -1.89
SPE1	YKL184W	YPR027C	Q12079	277 aa		3.25	□□□□□ -1.89
SPE1	YKL184W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.25	□□□□□ -1.89	not detected
SPE1	YKL184W	CPA2	P03965	1118 aa	Known RBP	3.24	□□□□□ -1.89
SPE1	YKL184W	HMG2	P12684	1045 aa		3.24	□□□□□ -1.89
SPE1	YKL184W	HOT13	P36078	116 aa		3.24	□□□□□ -1.89
SPE1	YKL184W	NET1	P47035	1189 aa		3.24	□□□□□ -1.89
SPE1	YKL184W	SPC105	P53148	917 aa		3.24	□□□□□ -1.89
SPE1	YKL184W	DOS2	P54858	310 aa		3.24	□□□□□ -1.89
SPE1	YKL184W	NGL1	Q08213	363 aa	Known RBP	3.24	□□□□□ -1.89
SPE1	YKL184W	ICT1	Q12385	394 aa		3.24	□□□□□ -1.89
SPE1	YKL184W	PMA2	P19657	947 aa		3.23	□□□□□ -1.89
SPE1	YKL184W	HOP1	P20050	605 aa		3.23	□□□□□ -1.89
SPE1	YKL184W	VPS33	P20795	691 aa		3.23	□□□□□ -1.89
SPE1	YKL184W	RPC34	P32910	317 aa		3.23	□□□□□ -1.89
SPE1	YKL184W	CCL1	P37366	393 aa		3.23	□□□□□ -1.89
SPE1	YKL184W	APD1	P38281	316 aa		3.23	□□□□□ -1.89
SPE1	YKL184W	EHT1	P38295	451 aa		3.23	□□□□□ -1.89
SPE1	YKL184W	LRO1	P40345	661 aa		3.23	□□□□□ -1.89
SPE1	YKL184W	BNA3	P47039	444 aa	Known RBP	3.23	□□□□□ -1.89
SPE1	YKL184W	YAP7	Q08182	245 aa		3.23	□□□□□ -1.89
SPE1	YKL184W	TRE2	Q08693	809 aa		3.23	□□□□□ -1.89
SPE1	YKL184W	RPL7A	P05737	244 aa	Known RBP	3.22	□□□□□ -1.89
SPE1	YKL184W	BET2	P20133	325 aa		3.22	□□□□□ -1.89
SPE1	YKL184W	OPT1	P40897	799 aa		3.22	□□□□□ -1.89
SPE1	YKL184W	YJL043W	P47053	257 aa		3.22	□□□□□ -1.89
SPE1	YKL184W	SLD3	P53135	668 aa		3.22	□□□□□ -1.89
SPE1	YKL184W	YNL018C	P53976	612 aa		3.22	□□□□□ -1.89
SPE1	YKL184W	ARR3	Q06598	404 aa		3.22	□□□□□ -1.89
SPE1	YKL184W	RPL7B	Q12213	244 aa	Known RBP	3.22	□□□□□ -1.89
SPE1	YKL184W	CWH43	P25618	953 aa		3.21	□□□□□ -1.9
SPE1	YKL184W	HXT4	P32467	576 aa		3.21	□□□□□ -1.9
SPE1	YKL184W	RMA1	P36001	430 aa	Known RBP	3.21	□□□□□ -1.9
SPE1	YKL184W	EMP65	P40085	556 aa		3.21	□□□□□ -1.9
SPE1	YKL184W	PEF1	P53238	335 aa		3.21	□□□□□ -1.9
SPE1	YKL184W	ATP23	P53722	227 aa		3.21	□□□□□ -1.9
SPE1	YKL184W	YEL076C-A	P0CX16	216 aa		3.2	□□□□□ -1.9
SPE1	YKL184W	YLR464W	P0CX17	216 aa		3.2	□□□□□ -1.9
SPE1	YKL184W	PCK1	P10963	549 aa		3.2	□□□□□ -1.9
SPE1	YKL184W	RNR3	P21672	869 aa	Known RBP	3.2	□□□□□ -1.9
SPE1	YKL184W	DSS4	P32601	143 aa		3.2	□□□□□ -1.9
SPE1	YKL184W	MTC7	P32633	139 aa		3.2	□□□□□ -1.9
SPE1	YKL184W	TMT1	P32643	299 aa		3.2	□□□□□ -1.9
SPE1	YKL184W	YEL076C	P39971	216 aa		3.2	□□□□□ -1.9
SPE1	YKL184W	GPP2	P40106	250 aa	Known RBP	3.2	□□□□□ -1.9
SPE1	YKL184W	YDL183C	P48569	320 aa		3.2	□□□□□ -1.9
SPE1	YKL184W	RPS15	Q01855	142 aa	Known RBP	3.2	□□□□□ -1.9
SPE1	YKL184W	WAR1	Q03631	944 aa		3.2	□□□□□ -1.9
SPE1	YKL184W	USA1	Q03714	838 aa		3.2	□□□□□ -1.9
SPE1	YKL184W	VPS5	Q92331	675 aa		3.2	□□□□□ -1.9
SPE1	YKL184W	ATP12	P22135	325 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	DAL3	P32459	195 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	EUG1	P32474	517 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	UBP12	P39538	1254 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	YEN1	P40028	759 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	YIL092W	P40497	633 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	ULP2	P40537	1034 aa	Predicted RBP	3.19	□□□□□ -1.9
SPE1	YKL184W	PIP2	P52960	996 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	HOL1	P53389	586 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	YNL058C	P53947	316 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	HOS1	Q12214	470 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	BI2	P03873	423 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	COX11	P19516	300 aa	Known RBP	3.19	□□□□□ -1.9
SPE1	YKL184W	SER1	P33330	395 aa	Known RBP	3.19	□□□□□ -1.9
SPE1	YKL184W	EXO1	P39875	702 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	PSA1	P41940	361 aa	Known RBP	3.19	□□□□□ -1.9
SPE1	YKL184W	GAT1	P43574	510 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	SAP4	P53036	818 aa		3.19	□□□□□ -1.9
SPE1	YKL184W	CWC2	Q12046	339 aa	Predicted RBP	3.19	□□□□□ -1.9
SPE1	YKL184W	AAC1	P04710	309 aa		3.18	□□□□□ -1.9
SPE1	YKL184W	KAR1	P11927	433 aa		3.18	□□□□□ -1.9
SPE1	YKL184W	YPK1	P12688	680 aa	Known RBP	3.18	□□□□□ -1.9
SPE1	YKL184W	TSR4	P25040	408 aa		3.18	□□□□□ -1.9
SPE1	YKL184W	BEM3	P32873	1128 aa		3.18	□□□□□ -1.9
SPE1	YKL184W	RRP8	P38961	392 aa	Known RBP	3.18	□□□□□ -1.9
SPE1	YKL184W	SNO3	P43544	222 aa		3.18	□□□□□ -1.9
SPE1	YKL184W	YFL015C	P43578	164 aa		3.18	□□□□□ -1.9
SPE1	YKL184W	IRC5	P43610	853 aa		3.18	□□□□□ -1.9
SPE1	YKL184W	NIT2	P47016	307 aa		3.18	□□□□□ -1.9
SPE1	YKL184W	ERG13	P54839	491 aa	Known RBP	3.18	□□□□□ -1.9
SPE1	YKL184W	CRT10	Q08226	957 aa		3.18	□□□□□ -1.9
SPE1	YKL184W	YOR378W	Q08902	515 aa		3.18	□□□□□ -1.9
SPE1	YKL184W	LEU2	P04173	364 aa	Predicted RBP	3.17	□□□□□ -1.9
SPE1	YKL184W	AQY1	P0CD91	305 aa		3.17	□□□□□ -1.9
SPE1	YKL184W	URE2	P23202	354 aa	Known RBP	3.17	□□□□□ -1.9
SPE1	YKL184W	MBR1	P23493	339 aa		3.17	□□□□□ -1.9
SPE1	YKL184W	NMD5	P46970	1048 aa		3.17	□□□□□ -1.9
SPE1	YKL184W	STP1	Q00947	519 aa		3.17	□□□□□ -1.9
SPE1	YKL184W	PEX15	Q08215	383 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms