RNA–Protein interactions for RNA: YKL105C

SEG2, Transcript of Eisosome component, yeast

Gene SEG2, Length 3,399 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEG2	YKL105C	YKL050C	P35736	922 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	APM3	P38153	483 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	TDP1	P38319	544 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	CCT4	P39078	528 aa	Known RBP	4.88	□□□□□ -1.63
SEG2	YKL105C	BUD6	P41697	788 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	YDR179W-A	Q03983	463 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	SFH1	Q06168	426 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	PHO92	Q06390	306 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	RAD1	P06777	1100 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	PHO11	P35842	467 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	RDH54	P38086	958 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	FES1	P38260	290 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	PHO12	P38693	467 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	LEU5	P38702	357 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	RGA1	P39083	1007 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	PRP31	P49704	494 aa	Predicted RBP	4.88	□□□□□ -1.63
SEG2	YKL105C	NAS6	P50086	228 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	TIM50	Q02776	476 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	ARP10	Q04549	284 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	AEP3	Q12089	606 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	LAG2	Q92325	660 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	DSF1	P0CX08	502 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	YNR073C	P0CX09	502 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	SEC2	P17065	759 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	VMA16	P23968	213 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	LCB1	P25045	558 aa	Known RBP	4.88	□□□□□ -1.63
SEG2	YKL105C	KTR4	P38131	464 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	FTH1	P38310	465 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	IMD2	P38697	523 aa	Known RBP	4.88	□□□□□ -1.63
SEG2	YKL105C	YHR182W	P38870	785 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	KHA1	P40309	873 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	YJL181W	P46987	611 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	RMI1	Q02685	241 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	YML082W	Q04533	649 aa	Known RBP	4.88	□□□□□ -1.63
SEG2	YKL105C	SMC5	Q08204	1093 aa		4.88	□□□□□ -1.63
SEG2	YKL105C	PET54	P10834	293 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	CHS2	P14180	963 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	ATE1	P16639	503 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	KIP1	P28742	1111 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	RAM2	P29703	316 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	LOT5	P34234	306 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	YKT6	P36015	200 aa	Known RBP	4.87	□□□□□ -1.63
SEG2	YKL105C	COS111	P38308	924 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	GLO3	P38682	493 aa	Known RBP	4.87	□□□□□ -1.63
SEG2	YKL105C	SMF2	P38778	549 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	PKP1	P40530	394 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	DOT5	P40553	215 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	TMA22	P47089	198 aa	Predicted RBP	4.87	□□□□□ -1.63
SEG2	YKL105C	YKE2	P52553	114 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	UTP8	P53276	713 aa	Known RBP	4.87	□□□□□ -1.63
SEG2	YKL105C	LSB1	P53281	241 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	YNL040W	P53960	456 aa	Predicted RBP	4.87	□□□□□ -1.63
SEG2	YKL105C	HAS1	Q03532	505 aa	Known RBP	4.87	□□□□□ -1.63
SEG2	YKL105C	MMP1	Q12372	583 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	PRP6	P19735	899 aa	Predicted RBP	4.87	□□□□□ -1.63
SEG2	YKL105C	YHR112C	P38716	378 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	YIL166C	P40445	542 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	RPE1	P46969	238 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	RSM26	P47141	266 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	CNM67	P53865	581 aa	Known RBP	4.87	□□□□□ -1.63
SEG2	YKL105C	MUB1	Q03162	620 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	RMD1	Q03441	430 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	SPC24	Q04477	213 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	YDL176W	Q12027	708 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	MCM16	Q12262	181 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	CDC24	P11433	854 aa	Predicted RBP	4.87	□□□□□ -1.63
SEG2	YKL105C	YAK1	P14680	807 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SEG2	YKL105C	CMK2	P22517	447 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	PRP28	P23394	588 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	SSH4	P32343	579 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	ERV46	P39727	415 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	SHQ1	P40486	507 aa	Predicted RBP	4.87	□□□□□ -1.63
SEG2	YKL105C	NET1	P47035	1189 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	GTB1	Q04924	702 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	GMC2	Q06201	188 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	YPQ2	Q06328	317 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	MRL1	Q06815	381 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	UIP4	Q08926	304 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	YPL216W	Q08964	1102 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	APL4	Q12028	832 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	ATG34	Q12292	412 aa		4.87	□□□□□ -1.63
SEG2	YKL105C	TRP2	P00899	507 aa	Known RBP	4.86	□□□□□ -1.63
SEG2	YKL105C	GCN3	P14741	305 aa		4.86	□□□□□ -1.63
SEG2	YKL105C	APA2	P22108	325 aa		4.86	□□□□□ -1.63
SEG2	YKL105C	HXT2	P23585	541 aa		4.86	□□□□□ -1.63
SEG2	YKL105C	BIO2	P32451	375 aa		4.86	□□□□□ -1.63
SEG2	YKL105C	SUI1	P32911	108 aa	Known RBP	4.86	□□□□□ -1.63
SEG2	YKL105C	TGL4	P36165	910 aa		4.86	□□□□□ -1.63
SEG2	YKL105C	VPS45	P38932	577 aa		4.86	□□□□□ -1.63
SEG2	YKL105C	YPD1	Q07688	167 aa		4.86	□□□□□ -1.63
SEG2	YKL105C	TUM1	Q08686	304 aa	Known RBP	4.86	□□□□□ -1.63
SEG2	YKL105C	GAL4	P04386	881 aa		4.86	□□□□□ -1.63
SEG2	YKL105C	MSD1	P15179	658 aa	Known RBP	4.86	□□□□□ -1.63
SEG2	YKL105C	DBP5	P20449	482 aa	Known RBP	4.86	□□□□□ -1.63
SEG2	YKL105C	KIN3	P22209	435 aa		4.86	□□□□□ -1.63
SEG2	YKL105C	RVS161	P25343	265 aa	Known RBP	4.86	□□□□□ -1.63
SEG2	YKL105C	YDJ1	P25491	409 aa	Known RBP	4.86	□□□□□ -1.63
SEG2	YKL105C	AAP1	P37898	856 aa	Known RBP	4.86	□□□□□ -1.63
SEG2	YKL105C	UBP9	P39967	754 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms