RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W DAM1P53267 343 aa2.48□□□□□ -2.01
NUP100YKL068W BNI5P53890 448 aaKnown RBP2.48□□□□□ -2.01
NUP100YKL068W RMT2Q03305 412 aa2.48□□□□□ -2.01
NUP100YKL068W YDR131CQ03899 556 aa2.48□□□□□ -2.01
NUP100YKL068W RAD33Q04231 177 aa2.48□□□□□ -2.01
NUP100YKL068W AIM32Q04689 311 aa2.48□□□□□ -2.01
NUP100YKL068W APC5Q08683 685 aa2.48□□□□□ -2.01
NUP100YKL068W GNT1Q12096 491 aa2.48□□□□□ -2.01
NUP100YKL068W NOP58Q12499 511 aaKnown RBP2.48□□□□□ -2.01
NUP100YKL068W SAC3P46674 1301 aa2.48□□□□□ -2.01
NUP100YKL068W GLN4P13188 809 aaKnown RBP2.48□□□□□ -2.01
NUP100YKL068W VMA2P16140 517 aaKnown RBP2.48□□□□□ -2.01
NUP100YKL068W UBC1P21734 215 aaKnown RBP2.48□□□□□ -2.01
NUP100YKL068W YCK2P23292 546 aaKnown RBP2.48□□□□□ -2.01
NUP100YKL068W CLB4P24871 460 aa2.48□□□□□ -2.01
NUP100YKL068W ROX1P25042 368 aa2.48□□□□□ -2.01
NUP100YKL068W RRP7P25368 297 aaPredicted RBP2.48□□□□□ -2.01
NUP100YKL068W CBF2P32504 956 aa2.48□□□□□ -2.01
NUP100YKL068W SMI1P32566 505 aa2.48□□□□□ -2.01
NUP100YKL068W IME2P32581 645 aa2.48□□□□□ -2.01
NUP100YKL068W NPL6P32832 435 aa2.48□□□□□ -2.01
NUP100YKL068W PGM2P37012 569 aaKnown RBP2.48□□□□□ -2.01
NUP100YKL068W YEL025CP39991 1188 aa2.48□□□□□ -2.01
NUP100YKL068W KHA1P40309 873 aa2.48□□□□□ -2.01
NUP100YKL068W SEC28P40509 296 aaKnown RBP2.48□□□□□ -2.01
NUP100YKL068W SAP4P53036 818 aa2.48□□□□□ -2.01
NUP100YKL068W SGF73P53165 657 aa2.48□□□□□ -2.01
NUP100YKL068W RPT6Q01939 405 aaKnown RBP2.48□□□□□ -2.01
NUP100YKL068W PEX25Q02969 394 aa2.48□□□□□ -2.01
NUP100YKL068W RTN2Q12443 393 aa2.48□□□□□ -2.01
NUP100YKL068W Q0142Q9ZZW4 58 aa2.48□□□□□ -2.01
NUP100YKL068W FUM1P08417 488 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W REC107P21651 314 aa2.47□□□□□ -2.01
NUP100YKL068W RFC1P38630 861 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W RTS1P38903 757 aa2.47□□□□□ -2.01
NUP100YKL068W GDI1P39958 451 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W SKP2P42843 763 aa2.47□□□□□ -2.01
NUP100YKL068W SPO74P45819 413 aa2.47□□□□□ -2.01
NUP100YKL068W YDL073WQ07454 984 aa2.47□□□□□ -2.01
NUP100YKL068W PTC5Q12511 572 aa2.47□□□□□ -2.01
NUP100YKL068W MRP10O75012 95 aa2.47□□□□□ -2.01
NUP100YKL068W CDC19P00549 500 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W CPA2P03965 1118 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W ARG82P07250 355 aa2.47□□□□□ -2.01
NUP100YKL068W FUS1P11710 512 aa2.47□□□□□ -2.01
NUP100YKL068W OLE1P21147 510 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W APN1P22936 367 aa2.47□□□□□ -2.01
NUP100YKL068W YCL002CP25565 263 aa2.47□□□□□ -2.01
NUP100YKL068W KIP1P28742 1111 aa2.47□□□□□ -2.01
NUP100YKL068W CDC12P32468 407 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W ASH1P34233 588 aa2.47□□□□□ -2.01
NUP100YKL068W YKR051WP36142 418 aa2.47□□□□□ -2.01
NUP100YKL068W PNT1P38969 423 aa2.47□□□□□ -2.01
NUP100YKL068W UME6P39001 836 aa2.47□□□□□ -2.01
NUP100YKL068W SWD1P39706 426 aa2.47□□□□□ -2.01
NUP100YKL068W HST1P53685 503 aa2.47□□□□□ -2.01
NUP100YKL068W FCP1Q03254 732 aa2.47□□□□□ -2.01
NUP100YKL068W SRC1Q03707 834 aa2.47□□□□□ -2.01
NUP100YKL068W CRR1Q05790 422 aa2.47□□□□□ -2.01
NUP100YKL068W TFC6Q06339 672 aa2.47□□□□□ -2.01
NUP100YKL068W PHO5P00635 467 aa2.47□□□□□ -2.01
NUP100YKL068W HTS1P07263 546 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W RPL11AP0C0W9 174 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W SWI4P25302 1093 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W HXT4P32467 576 aa2.47□□□□□ -2.01
NUP100YKL068W LAS1P36146 502 aaPredicted RBP2.47□□□□□ -2.01
NUP100YKL068W ATG14P38270 344 aa2.47□□□□□ -2.01
NUP100YKL068W YBR138CP38277 524 aa2.47□□□□□ -2.01
NUP100YKL068W RGD1P38339 666 aa2.47□□□□□ -2.01
NUP100YKL068W INP51P40559 946 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W ARF3P40994 183 aaRIP-Chip data2.47□□□□□ -2.01not detected
NUP100YKL068W NUP85P46673 744 aa2.47□□□□□ -2.01
NUP100YKL068W YJR124CP47159 448 aa2.47□□□□□ -2.01
NUP100YKL068W NIT3P49954 291 aa2.47□□□□□ -2.01
NUP100YKL068W UBP15P50101 1230 aa2.47□□□□□ -2.01
NUP100YKL068W MNP1P53163 194 aaPredicted RBP2.47□□□□□ -2.01
NUP100YKL068W SPO1P53541 631 aa2.47□□□□□ -2.01
NUP100YKL068W YNR065CP53751 1116 aa2.47□□□□□ -2.01
NUP100YKL068W NAM8Q00539 523 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W YPL107WQ02873 248 aa2.47□□□□□ -2.01
NUP100YKL068W LRS4Q04087 347 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W HRQ1Q05549 1077 aa2.47□□□□□ -2.01
NUP100YKL068W PHO92Q06390 306 aa2.47□□□□□ -2.01
NUP100YKL068W NGL1Q08213 363 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W PDH1Q12428 516 aaKnown RBP2.47□□□□□ -2.01
NUP100YKL068W RPL11BQ3E757 174 aaPredicted RBP2.47□□□□□ -2.01
NUP100YKL068W APM4Q99186 491 aa2.47□□□□□ -2.01
NUP100YKL068W FLO1P32768 1537 aa2.47□□□□□ -2.01
NUP100YKL068W SUI3P09064 285 aaKnown RBP2.46□□□□□ -2.02
NUP100YKL068W MIS1P09440 975 aaKnown RBP2.46□□□□□ -2.02
NUP100YKL068W POL3P15436 1097 aa2.46□□□□□ -2.02
NUP100YKL068W BET2P20133 325 aa2.46□□□□□ -2.02
NUP100YKL068W STE50P25344 346 aa2.46□□□□□ -2.02
NUP100YKL068W POL4P25615 582 aa2.46□□□□□ -2.02
NUP100YKL068W POT1P27796 417 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
NUP100YKL068W CYS3P31373 394 aaKnown RBP2.46□□□□□ -2.02
NUP100YKL068W KNS1P32350 737 aaPredicted RBP2.46□□□□□ -2.02
NUP100YKL068W TGL1P34163 548 aa2.46□□□□□ -2.02
NUP100YKL068W GCS1P35197 352 aa2.46□□□□□ -2.02
NUP100YKL068W SDS22P36047 338 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms