RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C GLN3P18494 730 aa2.25□□□□□ -2.05
UFD4YKL010C DIT1P21623 536 aa2.25□□□□□ -2.05
UFD4YKL010C SQT1P35184 431 aa2.25□□□□□ -2.05
UFD4YKL010C RIM2P38127 377 aa2.25□□□□□ -2.05
UFD4YKL010C YBR062CP38239 180 aa2.25□□□□□ -2.05
UFD4YKL010C TIF5P38431 405 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C DLD3P39976 496 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C DSE1P40077 573 aa2.25□□□□□ -2.05
UFD4YKL010C LIA1P47120 325 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C NAS6P50086 228 aa2.25□□□□□ -2.05
UFD4YKL010C BRE5P53741 515 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C TFB2Q02939 513 aa2.25□□□□□ -2.05
UFD4YKL010C INP2Q03824 705 aa2.25□□□□□ -2.05
UFD4YKL010C PRM6Q04705 352 aa2.25□□□□□ -2.05
UFD4YKL010C LAP2Q10740 671 aa2.25□□□□□ -2.05
UFD4YKL010C GNT1Q12096 491 aa2.25□□□□□ -2.05
UFD4YKL010C CDC33P07260 213 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C ILS1P09436 1072 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C BAS1P22035 811 aa2.25□□□□□ -2.05
UFD4YKL010C AEP2P22136 580 aa2.25□□□□□ -2.05
UFD4YKL010C TKL1P23254 680 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C PKC1P24583 1151 aa2.25□□□□□ -2.05
UFD4YKL010C CDC20P26309 610 aa2.25□□□□□ -2.05
UFD4YKL010C MVD1P32377 396 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C POP4P38336 279 aa2.25□□□□□ -2.05
UFD4YKL010C TMN3P40071 706 aa2.25□□□□□ -2.05
UFD4YKL010C ARC1P46672 376 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C CUL3P53202 744 aa2.25□□□□□ -2.05
UFD4YKL010C YAF9P53930 226 aa2.25□□□□□ -2.05
UFD4YKL010C PNP1Q05788 311 aa2.25□□□□□ -2.05
UFD4YKL010C DUS3Q06053 668 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C IWR1Q07532 353 aaPredicted RBP2.25□□□□□ -2.05
UFD4YKL010C RIB2Q12362 591 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C SPE4Q12455 300 aa2.25□□□□□ -2.05
UFD4YKL010C YPT6Q99260 215 aa2.25□□□□□ -2.05
UFD4YKL010C AI1P03875 834 aa2.24□□□□□ -2.05
UFD4YKL010C YMR085WP0CF18 432 aa2.24□□□□□ -2.05
UFD4YKL010C YCR015CP25616 317 aa2.24□□□□□ -2.05
UFD4YKL010C OCT1P35999 772 aa2.24□□□□□ -2.05
UFD4YKL010C AIM18P38884 321 aa2.24□□□□□ -2.05
UFD4YKL010C CCT2P39076 527 aaKnown RBP2.24□□□□□ -2.05
UFD4YKL010C YIL001WP40560 513 aa2.24□□□□□ -2.05
UFD4YKL010C RLP7P40693 322 aaKnown RBP2.24□□□□□ -2.05
UFD4YKL010C SBE2P42223 864 aaKnown RBP2.24□□□□□ -2.05
UFD4YKL010C GIR2Q03768 265 aaPredicted RBP2.24□□□□□ -2.05
UFD4YKL010C UTP14Q04500 899 aaKnown RBP2.24□□□□□ -2.05
UFD4YKL010C ATP6P00854 259 aa2.24□□□□□ -2.05
UFD4YKL010C RAP1P11938 827 aa2.24□□□□□ -2.05
UFD4YKL010C DBP5P20449 482 aaKnown RBP2.24□□□□□ -2.05
UFD4YKL010C ARG1P22768 420 aa2.24□□□□□ -2.05
UFD4YKL010C PWP2P25635 923 aaKnown RBP2.24□□□□□ -2.05
UFD4YKL010C FRE2P36033 711 aa2.24□□□□□ -2.05
UFD4YKL010C RPC37P36121 282 aa2.24□□□□□ -2.05
UFD4YKL010C JNM1P36224 373 aa2.24□□□□□ -2.05
UFD4YKL010C MMS4P38257 691 aa2.24□□□□□ -2.05
UFD4YKL010C KSP1P38691 1029 aaKnown RBP2.24□□□□□ -2.05
UFD4YKL010C BEM4P39011 633 aa2.24□□□□□ -2.05
UFD4YKL010C KAP123P40069 1113 aaKnown RBP2.24□□□□□ -2.05
UFD4YKL010C BFA1P47113 574 aa2.24□□□□□ -2.05
UFD4YKL010C ORC5P50874 479 aa2.24□□□□□ -2.05
UFD4YKL010C DIA3P52290 468 aa2.24□□□□□ -2.05
UFD4YKL010C RRT6P53117 311 aaPredicted RBP2.24□□□□□ -2.05
UFD4YKL010C BUD32P53323 261 aa2.24□□□□□ -2.05
UFD4YKL010C YPR027CQ12079 277 aa2.24□□□□□ -2.05
UFD4YKL010C SLX4Q12098 748 aa2.24□□□□□ -2.05
UFD4YKL010C ACE2P21192 770 aa2.24□□□□□ -2.05
UFD4YKL010C UTR2P32623 467 aa2.24□□□□□ -2.05
UFD4YKL010C UTR4P32626 227 aa2.24□□□□□ -2.05
UFD4YKL010C MOT2P34909 587 aaKnown RBP2.24□□□□□ -2.05
UFD4YKL010C ECM2P38241 364 aaKnown RBP2.24□□□□□ -2.05
UFD4YKL010C CEM1P39525 442 aa2.24□□□□□ -2.05
UFD4YKL010C YJL007CP47080 104 aa2.24□□□□□ -2.05
UFD4YKL010C TRS130Q03660 1102 aa2.24□□□□□ -2.05
UFD4YKL010C ADI1Q03677 179 aa2.24□□□□□ -2.05
UFD4YKL010C ISR1Q06098 443 aaKnown RBP2.24□□□□□ -2.05
UFD4YKL010C SMC5Q08204 1093 aa2.24□□□□□ -2.05
UFD4YKL010C RMD5Q12508 421 aa2.24□□□□□ -2.05
UFD4YKL010C MRPS28P21771 286 aa2.23□□□□□ -2.05
UFD4YKL010C SAT4P25333 603 aaKnown RBP2.23□□□□□ -2.05
UFD4YKL010C SWE1P32944 819 aa2.23□□□□□ -2.05
UFD4YKL010C SEG2P34250 1132 aa2.23□□□□□ -2.05
UFD4YKL010C YBL036CP38197 257 aa2.23□□□□□ -2.05
UFD4YKL010C MXR1P40029 184 aa2.23□□□□□ -2.05
UFD4YKL010C SLX8P40072 274 aa2.23□□□□□ -2.05
UFD4YKL010C YER186CP40101 306 aa2.23□□□□□ -2.05
UFD4YKL010C JEM1P40358 645 aa2.23□□□□□ -2.05
UFD4YKL010C SEC28P40509 296 aaKnown RBP2.23□□□□□ -2.05
UFD4YKL010C ULP2P40537 1034 aaPredicted RBP2.23□□□□□ -2.05
UFD4YKL010C SUM1P46676 1062 aa2.23□□□□□ -2.05
UFD4YKL010C YJL132WP47014 750 aa2.23□□□□□ -2.05
UFD4YKL010C TAH11P47112 604 aa2.23□□□□□ -2.05
UFD4YKL010C RTA1P53047 317 aa2.23□□□□□ -2.05
UFD4YKL010C MND1P53102 219 aa2.23□□□□□ -2.05
UFD4YKL010C SPP2Q02521 185 aa2.23□□□□□ -2.05
UFD4YKL010C CDA1Q06702 301 aa2.23□□□□□ -2.05
UFD4YKL010C YPL216WQ08964 1102 aa2.23□□□□□ -2.05
UFD4YKL010C ZRT2Q12436 422 aa2.23□□□□□ -2.05
UFD4YKL010C FBP1P09201 348 aa2.23□□□□□ -2.05
UFD4YKL010C ASP3-2P0CX77 362 aa2.23□□□□□ -2.05
UFD4YKL010C ASP3-3P0CX78 362 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms