RNA–Protein interactions for RNA: YJR093C

FIP1, Transcript of Subunit of cleavage polyadenylation factor (CPF), yeast

Gene FIP1, Length 984 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIP1	YJR093C	TUB1	P09733	447 aa	Known RBP	4.62	□□□□□ -1.67
FIP1	YJR093C	PGI1	P12709	554 aa	Known RBP	4.62	□□□□□ -1.67
FIP1	YJR093C	TUP1	P16649	713 aa		4.62	□□□□□ -1.67
FIP1	YJR093C	SCS2	P40075	244 aa	Known RBP	4.62	□□□□□ -1.67
FIP1	YJR093C	YIL166C	P40445	542 aa		4.62	□□□□□ -1.67
FIP1	YJR093C	ENP2	P48234	707 aa	Known RBP	4.62	□□□□□ -1.67
FIP1	YJR093C	ASK10	P48361	1146 aa		4.62	□□□□□ -1.67
FIP1	YJR093C	SNF12	P53628	566 aa		4.62	□□□□□ -1.67
FIP1	YJR093C	YSH1	Q06224	779 aa	Predicted RBP	4.62	□□□□□ -1.67
FIP1	YJR093C	RKI1	Q12189	258 aa		4.62	□□□□□ -1.67
FIP1	YJR093C	MSS18	P08593	268 aa		4.61	□□□□□ -1.67
FIP1	YJR093C	HOP1	P20050	605 aa		4.61	□□□□□ -1.67
FIP1	YJR093C	NTH1	P32356	751 aa		4.61	□□□□□ -1.67
FIP1	YJR093C	RMA1	P36001	430 aa	Known RBP	4.61	□□□□□ -1.67
FIP1	YJR093C	APL3	P38065	1025 aa		4.61	□□□□□ -1.67
FIP1	YJR093C	YMC2	P38087	329 aa		4.61	□□□□□ -1.67
FIP1	YJR093C	YHL041W	P38730	149 aa		4.61	□□□□□ -1.67
FIP1	YJR093C	MIT1	P40002	666 aa		4.61	□□□□□ -1.67
FIP1	YJR093C	FTR1	P40088	404 aa		4.61	□□□□□ -1.67
FIP1	YJR093C	MAD2	P40958	196 aa		4.61	□□□□□ -1.67
FIP1	YJR093C	QRI7	P43122	407 aa		4.61	□□□□□ -1.67
FIP1	YJR093C	MNT2	P53059	558 aa		4.61	□□□□□ -1.67
FIP1	YJR093C	SPO1	P53541	631 aa		4.61	□□□□□ -1.67
FIP1	YJR093C	MOT3	P54785	490 aa	Known RBP	4.61	□□□□□ -1.67
FIP1	YJR093C	PPN1	Q04119	674 aa		4.61	□□□□□ -1.67
FIP1	YJR093C	RRP6	Q12149	733 aa	Known RBP	4.61	□□□□□ -1.67
FIP1	YJR093C	ADH4	P10127	382 aa		4.6	□□□□□ -1.67
FIP1	YJR093C	HMG2	P12684	1045 aa		4.6	□□□□□ -1.67
FIP1	YJR093C	STE12	P13574	688 aa		4.6	□□□□□ -1.67
FIP1	YJR093C	VPS24	P36095	224 aa	Known RBP	4.6	□□□□□ -1.67
FIP1	YJR093C	RIM4	P38741	713 aa		4.6	□□□□□ -1.67
FIP1	YJR093C	SAW1	P39735	261 aa		4.6	□□□□□ -1.67
FIP1	YJR093C	YEL020C	P39994	560 aa		4.6	□□□□□ -1.67
FIP1	YJR093C	IES5	P40060	125 aa		4.6	□□□□□ -1.67
FIP1	YJR093C	YDL183C	P48569	320 aa		4.6	□□□□□ -1.67
FIP1	YJR093C	ATG16	Q03818	150 aa		4.6	□□□□□ -1.67
FIP1	YJR093C	HIM1	Q06674	414 aa		4.6	□□□□□ -1.67
FIP1	YJR093C	DIN7	Q12086	430 aa		4.6	□□□□□ -1.67
FIP1	YJR093C	PSF3	Q12146	194 aa		4.6	□□□□□ -1.67
FIP1	YJR093C	SPO11	P23179	398 aa		4.59	□□□□□ -1.67
FIP1	YJR093C	PWP2	P25635	923 aa	Known RBP	4.59	□□□□□ -1.67
FIP1	YJR093C	TGL1	P34163	548 aa		4.59	□□□□□ -1.67
FIP1	YJR093C	EHT1	P38295	451 aa		4.59	□□□□□ -1.67
FIP1	YJR093C	PPE1	P38796	400 aa		4.59	□□□□□ -1.67
FIP1	YJR093C	IMA5	P40884	581 aa		4.59	□□□□□ -1.67
FIP1	YJR093C	PUS4	P48567	403 aa	Known RBP	4.59	□□□□□ -1.67
FIP1	YJR093C	TAN1	P53072	289 aa	Predicted RBP	4.59	□□□□□ -1.67
FIP1	YJR093C	PEF1	P53238	335 aa		4.59	□□□□□ -1.67
FIP1	YJR093C	BRE1	Q07457	700 aa	Known RBP	4.59	□□□□□ -1.67
FIP1	YJR093C	VPS5	Q92331	675 aa		4.59	□□□□□ -1.67
FIP1	YJR093C	PHO5	P00635	467 aa		4.58	□□□□□ -1.68
FIP1	YJR093C	TOP1	P04786	769 aa		4.58	□□□□□ -1.68
FIP1	YJR093C	ADY2	P25613	283 aa		4.58	□□□□□ -1.68
FIP1	YJR093C	MAD3	P47074	515 aa		4.58	□□□□□ -1.68
FIP1	YJR093C	GLO1	P50107	326 aa		4.58	□□□□□ -1.68
FIP1	YJR093C	YNR071C	P53757	342 aa		4.58	□□□□□ -1.68
FIP1	YJR093C	SQS1	P53866	767 aa	Known RBP	4.58	□□□□□ -1.68
FIP1	YJR093C	APM1	Q00776	475 aa	Predicted RBP	4.58	□□□□□ -1.68
FIP1	YJR093C	TRS23	Q03784	219 aa		4.58	□□□□□ -1.68
FIP1	YJR093C	HLR1	Q04429	423 aa		4.58	□□□□□ -1.68
FIP1	YJR093C	UFO1	Q04511	668 aa		4.58	□□□□□ -1.68
FIP1	YJR093C	ARO10	Q06408	635 aa		4.58	□□□□□ -1.68
FIP1	YJR093C	YCG1	Q06680	1035 aa		4.58	□□□□□ -1.68
FIP1	YJR093C	DBP10	Q12389	995 aa	Known RBP	4.58	□□□□□ -1.68
FIP1	YJR093C	ARP7	Q12406	477 aa		4.58	□□□□□ -1.68
FIP1	YJR093C	URA3	P03962	267 aa		4.57	□□□□□ -1.68
FIP1	YJR093C	SEC18	P18759	758 aa	Known RBP	4.57	□□□□□ -1.68
FIP1	YJR093C	STE4	P18851	423 aa		4.57	□□□□□ -1.68
FIP1	YJR093C	CBP3	P21560	335 aa		4.57	□□□□□ -1.68
FIP1	YJR093C	ARG1	P22768	420 aa		4.57	□□□□□ -1.68
FIP1	YJR093C	PMT6	P42934	759 aa		4.57	□□□□□ -1.68
FIP1	YJR093C	YGR054W	P53235	642 aa	Known RBP	4.57	□□□□□ -1.68
FIP1	YJR093C	TEP1	P53916	434 aa		4.57	□□□□□ -1.68
FIP1	YJR093C	FDC1	Q03034	503 aa		4.57	□□□□□ -1.68
FIP1	YJR093C	BMS1	Q08965	1183 aa	Known RBP	4.57	□□□□□ -1.68
FIP1	YJR093C	VAS1	P07806	1104 aa	Known RBP	4.56	□□□□□ -1.68
FIP1	YJR093C	TRX2	P22803	104 aa	Known RBP	4.56	□□□□□ -1.68
FIP1	YJR093C	CWH43	P25618	953 aa		4.56	□□□□□ -1.68
FIP1	YJR093C	SDS22	P36047	338 aa		4.56	□□□□□ -1.68
FIP1	YJR093C	MUP3	P38734	546 aa		4.56	□□□□□ -1.68
FIP1	YJR093C	SWD1	P39706	426 aa		4.56	□□□□□ -1.68
FIP1	YJR093C	RPT2	P40327	437 aa	Known RBP	4.56	□□□□□ -1.68
FIP1	YJR093C	ASN1	P49089	572 aa	Known RBP	4.56	□□□□□ -1.68
FIP1	YJR093C	MDM20	Q12387	796 aa	Known RBP	4.56	□□□□□ -1.68
FIP1	YJR093C	RPA135	P22138	1203 aa	Known RBP	4.55	□□□□□ -1.68
FIP1	YJR093C	PET309	P32522	965 aa	Predicted RBP	4.55	□□□□□ -1.68
FIP1	YJR093C	MRPL7	P36519	292 aa		4.55	□□□□□ -1.68
FIP1	YJR093C	ACA1	P39970	489 aa		4.55	□□□□□ -1.68
FIP1	YJR093C	YGR021W	P53212	290 aa		4.55	□□□□□ -1.68
FIP1	YJR093C	NGL2	Q03264	515 aa	Known RBP	4.55	□□□□□ -1.68
FIP1	YJR093C	EFR3	Q03653	782 aa	Known RBP	4.55	□□□□□ -1.68
FIP1	YJR093C	YDR179W-A	Q03983	463 aa		4.55	□□□□□ -1.68
FIP1	YJR093C	RPN13	O13563	156 aa		4.54	□□□□□ -1.68
FIP1	YJR093C	DBF20	P32328	564 aa		4.54	□□□□□ -1.68
FIP1	YJR093C	YMC1	P32331	307 aa		4.54	□□□□□ -1.68
FIP1	YJR093C	APM3	P38153	483 aa		4.54	□□□□□ -1.68
FIP1	YJR093C	SPC72	P39723	622 aa		4.54	□□□□□ -1.68
FIP1	YJR093C	SSP120	P39931	234 aa	Known RBP	4.54	□□□□□ -1.68
FIP1	YJR093C	ERR3	P42222	437 aa		4.54	□□□□□ -1.68
FIP1	YJR093C	MDR1	P53258	950 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms