RNA–Protein interactions for RNA: YJR036C

HUL4, Transcript of Protein with similarity to hect domain E3 ubiquitin-protein ligases, yeast

Gene HUL4, Length 2,679 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HUL4	YJR036C	MSN4	P33749	630 aa		4.77	□□□□□ -1.65
HUL4	YJR036C	MNL1	P38888	796 aa		4.77	□□□□□ -1.65
HUL4	YJR036C	PIK1	P39104	1066 aa		4.77	□□□□□ -1.65
HUL4	YJR036C	IRC5	P43610	853 aa		4.77	□□□□□ -1.65
HUL4	YJR036C	GCR2	Q01722	534 aa		4.77	□□□□□ -1.65
HUL4	YJR036C	EMG1	Q06287	252 aa	Known RBP	4.77	□□□□□ -1.65
HUL4	YJR036C	SRP101	P32916	621 aa		4.77	□□□□□ -1.65
HUL4	YJR036C	DCW1	P36091	449 aa		4.77	□□□□□ -1.65
HUL4	YJR036C	MSC7	P38694	644 aa		4.77	□□□□□ -1.65
HUL4	YJR036C	UTP9	P38882	575 aa	Known RBP	4.77	□□□□□ -1.65
HUL4	YJR036C	STT3	P39007	718 aa	Known RBP	4.77	□□□□□ -1.65
HUL4	YJR036C	GIM3	P53900	129 aa		4.77	□□□□□ -1.65
HUL4	YJR036C	NMD4	Q12129	218 aa		4.77	□□□□□ -1.65
HUL4	YJR036C	GPM3	Q12326	303 aa		4.77	□□□□□ -1.65
HUL4	YJR036C	GCN4	P03069	281 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	ADE8	P04161	214 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	RPP1B	P10622	106 aa	Known RBP	4.76	□□□□□ -1.65
HUL4	YJR036C	BIK1	P11709	440 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	AFT1	P22149	690 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	YME1	P32795	747 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	SDS3	P40505	327 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	ARF3	P40994	183 aa	RIP-Chip data	4.76	□□□□□ -1.65	RIP-Chip
HUL4	YJR036C	KTR6	P54070	446 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	NGL3	Q03210	505 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	TGS1	Q12052	315 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	GET3	Q12154	354 aa	Known RBP	4.76	□□□□□ -1.65
HUL4	YJR036C	RPN5	Q12250	445 aa	Known RBP	4.76	□□□□□ -1.65
HUL4	YJR036C	NUC1	P08466	329 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	YKL107W	P34251	309 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	PHO11	P35842	467 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	DAD2	P36162	133 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	MAK5	P38112	773 aa	Predicted RBP	4.76	□□□□□ -1.65
HUL4	YJR036C	LDH1	P38139	375 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	PHO12	P38693	467 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	PAC1	P39946	494 aa	Known RBP	4.76	□□□□□ -1.65
HUL4	YJR036C	GYL1	Q04322	720 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	BOP2	Q06150	570 aa		4.76	□□□□□ -1.65
HUL4	YJR036C	NGL1	Q08213	363 aa	Known RBP	4.76	□□□□□ -1.65
HUL4	YJR036C	TDH1	P00360	332 aa	Known RBP	4.75	□□□□□ -1.65
HUL4	YJR036C	POL3	P15436	1097 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	PHO3	P24031	467 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	CRM1	P30822	1084 aa	Known RBP	4.75	□□□□□ -1.65
HUL4	YJR036C	UBP13	P38187	747 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	REI1	P38344	393 aa	Predicted RBP	4.75	□□□□□ -1.65
HUL4	YJR036C	MUP3	P38734	546 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	UBP7	P40453	1071 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	YGL242C	P53066	181 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	YSA1	Q01976	231 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	MUB1	Q03162	620 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	MRPS17	Q03246	237 aa	Predicted RBP	4.75	□□□□□ -1.65
HUL4	YJR036C	URC2	Q04411	772 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	RAM1	P22007	431 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	VPS3	P23643	1011 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	PYC2	P32327	1180 aa	Known RBP	4.75	□□□□□ -1.65
HUL4	YJR036C	RPC82	P32349	654 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	UBP11	P36026	717 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	HSH155	P49955	971 aa	Known RBP	4.75	□□□□□ -1.65
HUL4	YJR036C	PSP1	P50896	841 aa	Known RBP	4.75	□□□□□ -1.65
HUL4	YJR036C	MLC1	P53141	149 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	FCP1	Q03254	732 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	FMP45	Q07651	309 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	LOT6	Q07923	191 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	HER1	Q12276	1246 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	AHC1	Q12433	566 aa		4.75	□□□□□ -1.65
HUL4	YJR036C	RPC31	P17890	251 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	SRB2	P34162	210 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	STV1	P37296	890 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	BSD2	P38356	321 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	YHR054C	P38780	354 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	SMF1	P38925	575 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	MAD2	P40958	196 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	BIO3	P50277	480 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	ALT2	P52892	507 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	NCS6	P53088	359 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	ART5	P53244	586 aa	Known RBP	4.74	□□□□□ -1.65
HUL4	YJR036C	ARX1	Q03862	593 aa	Known RBP	4.74	□□□□□ -1.65
HUL4	YJR036C	YLR456W	Q06199	204 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	TLG2	Q08144	397 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	RTK1	Q12100	620 aa	Predicted RBP	4.74	□□□□□ -1.65
HUL4	YJR036C	HVG1	P0CE11	249 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	UNG1	P12887	359 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	FRD1	P32614	470 aa	Known RBP	4.74	□□□□□ -1.65
HUL4	YJR036C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
HUL4	YJR036C	QDR2	P40474	542 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	VNX1	P42839	908 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	UBP2	Q01476	1272 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	ELP4	Q02884	456 aa	Known RBP	4.74	□□□□□ -1.65
HUL4	YJR036C	SLK19	Q08581	821 aa	Known RBP	4.74	□□□□□ -1.65
HUL4	YJR036C	CTI6	Q08923	506 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	CWC2	Q12046	339 aa	Predicted RBP	4.74	□□□□□ -1.65
HUL4	YJR036C	LEU9	Q12166	604 aa	Known RBP	4.74	□□□□□ -1.65
HUL4	YJR036C	SRN2	Q99176	213 aa		4.74	□□□□□ -1.65
HUL4	YJR036C	DBP5	P20449	482 aa	Known RBP	4.73	□□□□□ -1.65
HUL4	YJR036C	TPO5	P36029	618 aa		4.73	□□□□□ -1.65
HUL4	YJR036C	SCS2	P40075	244 aa	Known RBP	4.73	□□□□□ -1.65
HUL4	YJR036C	YJR061W	P40355	935 aa		4.73	□□□□□ -1.65
HUL4	YJR036C	IAH1	P41734	238 aa		4.73	□□□□□ -1.65
HUL4	YJR036C	EFM3	P47163	339 aa		4.73	□□□□□ -1.65
HUL4	YJR036C	YGR067C	P53243	804 aa		4.73	□□□□□ -1.65
HUL4	YJR036C	SPP1	Q03012	353 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms