RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	YIL166C	P40445	542 aa		2.8	□□□□□ -1.96
NUP82	YJL061W	SNF12	P53628	566 aa		2.8	□□□□□ -1.96
NUP82	YJL061W	MFM1	Q02783	413 aa		2.8	□□□□□ -1.96
NUP82	YJL061W	EFR3	Q03653	782 aa	Known RBP	2.8	□□□□□ -1.96
NUP82	YJL061W	YPL216W	Q08964	1102 aa		2.8	□□□□□ -1.96
NUP82	YJL061W	SST2	P11972	698 aa	Known RBP	2.8	□□□□□ -1.96
NUP82	YJL061W	HOP1	P20050	605 aa		2.8	□□□□□ -1.96
NUP82	YJL061W	CAP1	P28495	268 aa	Known RBP	2.8	□□□□□ -1.96
NUP82	YJL061W	TGL1	P34163	548 aa		2.8	□□□□□ -1.96
NUP82	YJL061W	MUP3	P38734	546 aa		2.8	□□□□□ -1.96
NUP82	YJL061W	MAD2	P40958	196 aa		2.8	□□□□□ -1.96
NUP82	YJL061W	YDR179W-A	Q03983	463 aa		2.8	□□□□□ -1.96
NUP82	YJL061W	ARR3	Q06598	404 aa		2.8	□□□□□ -1.96
NUP82	YJL061W	RTK1	Q12100	620 aa	Predicted RBP	2.8	□□□□□ -1.96
NUP82	YJL061W	MDM20	Q12387	796 aa	Known RBP	2.8	□□□□□ -1.96
NUP82	YJL061W	SPO11	P23179	398 aa		2.79	□□□□□ -1.96
NUP82	YJL061W	PIH1	P38768	344 aa		2.79	□□□□□ -1.96
NUP82	YJL061W	ASK10	P48361	1146 aa		2.79	□□□□□ -1.96
NUP82	YJL061W	PUS4	P48567	403 aa	Known RBP	2.79	□□□□□ -1.96
NUP82	YJL061W	YNR071C	P53757	342 aa		2.79	□□□□□ -1.96
NUP82	YJL061W	APM1	Q00776	475 aa	Predicted RBP	2.79	□□□□□ -1.96
NUP82	YJL061W	TRS23	Q03784	219 aa		2.79	□□□□□ -1.96
NUP82	YJL061W	TRI1	Q05024	226 aa		2.79	□□□□□ -1.96
NUP82	YJL061W	YOL057W	Q08225	711 aa		2.79	□□□□□ -1.96
NUP82	YJL061W	NYV1	Q12255	253 aa		2.79	□□□□□ -1.96
NUP82	YJL061W	URA3	P03962	267 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	PCK1	P10963	549 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	ARG1	P22768	420 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	YMC2	P38087	329 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	SCS2	P40075	244 aa	Known RBP	2.78	□□□□□ -1.96
NUP82	YJL061W	YIP4	P53093	235 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	MET14	Q02196	202 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	MLC2	Q06580	163 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	TGS1	Q12052	315 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	TPK2	P06245	380 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	VAS1	P07806	1104 aa	Known RBP	2.78	□□□□□ -1.96
NUP82	YJL061W	STE4	P18851	423 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	CBP3	P21560	335 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	DSS4	P32601	143 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	LOT5	P34234	306 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	YLF2	P38746	405 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	YEL020C	P39994	560 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	YDL073W	Q07454	984 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	DIN7	Q12086	430 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	DBP10	Q12389	995 aa	Known RBP	2.78	□□□□□ -1.96
NUP82	YJL061W	ARP7	Q12406	477 aa		2.78	□□□□□ -1.96
NUP82	YJL061W	PHO5	P00635	467 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	CNE1	P27825	502 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	PTP2	P29461	750 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	CCL1	P37366	393 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	RIM4	P38741	713 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	MIT1	P40002	666 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	YJR008W	P47085	338 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	BUD17	P53727	317 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	GAL1	P04385	528 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	STE12	P13574	688 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	YEF3	P16521	1044 aa	Known RBP	2.77	□□□□□ -1.97
NUP82	YJL061W	BET2	P20133	325 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	ILV6	P25605	309 aa	Known RBP	2.77	□□□□□ -1.97
NUP82	YJL061W	EMP70	P32802	667 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	PMC1	P38929	1173 aa	Predicted RBP	2.77	□□□□□ -1.97
NUP82	YJL061W	SWD1	P39706	426 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	GSM1	P42950	618 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	ATG36	P46983	293 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	MRK1	P50873	501 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	PIP2	P52960	996 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	SUT2	Q12286	268 aa		2.77	□□□□□ -1.97
NUP82	YJL061W	ADH4	P10127	382 aa		2.76	□□□□□ -1.97
NUP82	YJL061W	RPA135	P22138	1203 aa	Known RBP	2.76	□□□□□ -1.97
NUP82	YJL061W	VPS34	P22543	875 aa		2.76	□□□□□ -1.97
NUP82	YJL061W	SAT4	P25333	603 aa	Known RBP	2.76	□□□□□ -1.97
NUP82	YJL061W	ASN1	P49089	572 aa	Known RBP	2.76	□□□□□ -1.97
NUP82	YJL061W	PAP2	P53632	584 aa	Known RBP	2.76	□□□□□ -1.97
NUP82	YJL061W	CPR8	P53728	308 aa		2.76	□□□□□ -1.97
NUP82	YJL061W	CEG1	Q01159	459 aa	Predicted RBP	2.76	□□□□□ -1.97
NUP82	YJL061W	USA1	Q03714	838 aa		2.76	□□□□□ -1.97
NUP82	YJL061W	GFD1	Q04839	188 aa	Known RBP	2.76	□□□□□ -1.97
NUP82	YJL061W	HOF1	Q05080	669 aa		2.76	□□□□□ -1.97
NUP82	YJL061W	YOL114C	Q12322	202 aa		2.76	□□□□□ -1.97
NUP82	YJL061W	ZPS1	Q12512	249 aa		2.76	□□□□□ -1.97
NUP82	YJL061W	ADY2	P25613	283 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	UGP1	P32861	499 aa	Known RBP	2.75	□□□□□ -1.97
NUP82	YJL061W	PPZ2	P33329	710 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	COQ6	P53318	479 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	TEP1	P53916	434 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	RPS15	Q01855	142 aa	Known RBP	2.75	□□□□□ -1.97
NUP82	YJL061W	CRD1	Q07560	283 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	RRP6	Q12149	733 aa	Known RBP	2.75	□□□□□ -1.97
NUP82	YJL061W	TAD3	Q9URQ3	322 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	CPA2	P03965	1118 aa	Known RBP	2.75	□□□□□ -1.97
NUP82	YJL061W	CTT1	P06115	562 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	WHI2	P12611	486 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	PRP45	P28004	379 aa	Predicted RBP	2.75	□□□□□ -1.97
NUP82	YJL061W	RRP8	P38961	392 aa	Known RBP	2.75	□□□□□ -1.97
NUP82	YJL061W	PAC2	P39937	518 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	VFA1	P40080	203 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	HIS6	P40545	261 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	IMA5	P40884	581 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	IDS2	P46958	469 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	YGL117W	P53133	265 aa		2.75	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms