RNA–Protein interactions for RNA: YJL033W

HCA4, Transcript of DEAD box RNA helicase, yeast

Gene HCA4, Length 2,313 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCA4	YJL033W	ERG6	P25087	383 aa	Known RBP	4.27	□□□□□ -1.73
HCA4	YJL033W	PRP45	P28004	379 aa	Predicted RBP	4.27	□□□□□ -1.73
HCA4	YJL033W	FMO1	P38866	432 aa		4.27	□□□□□ -1.73
HCA4	YJL033W	BEM4	P39011	633 aa		4.27	□□□□□ -1.73
HCA4	YJL033W	GPG1	P53130	126 aa		4.27	□□□□□ -1.73
HCA4	YJL033W	YAP1802	P53309	568 aa		4.27	□□□□□ -1.73
HCA4	YJL033W	ARP5	P53946	755 aa		4.27	□□□□□ -1.73
HCA4	YJL033W	HBT1	Q07653	1046 aa	Known RBP	4.27	□□□□□ -1.73
HCA4	YJL033W	ISA1	Q07821	250 aa	Predicted RBP	4.27	□□□□□ -1.73
HCA4	YJL033W	APC1	P53886	1748 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	PEX1	P24004	1043 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	MVD1	P32377	396 aa	Known RBP	4.26	□□□□□ -1.73
HCA4	YJL033W	PUP2	P32379	260 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	HIR1	P32479	840 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	GRX4	P32642	244 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	VPS41	P38959	992 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	TEL2	P53038	688 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	MUK1	Q02866	612 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	YKL033W-A	Q86ZR7	236 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	DNF3	Q12674	1656 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	UBP12	P39538	1254 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	GET2	P40056	285 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	NOP9	P47077	666 aa	Known RBP	4.26	□□□□□ -1.73
HCA4	YJL033W	UBA2	P52488	636 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	TIM50	Q02776	476 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	ALE1	Q08548	619 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	SEC39	Q12745	709 aa		4.26	□□□□□ -1.73
HCA4	YJL033W	SIR3	P06701	978 aa		4.25	□□□□□ -1.73
HCA4	YJL033W	RAD3	P06839	778 aa		4.25	□□□□□ -1.73
HCA4	YJL033W	GPP1	P41277	250 aa	Known RBP	4.25	□□□□□ -1.73
HCA4	YJL033W	RSC8	P43609	557 aa	Known RBP	4.25	□□□□□ -1.73
HCA4	YJL033W	NPA3	P47122	385 aa		4.25	□□□□□ -1.73
HCA4	YJL033W	SSL2	Q00578	843 aa		4.25	□□□□□ -1.73
HCA4	YJL033W	YMR210W	Q03649	449 aa		4.25	□□□□□ -1.73
HCA4	YJL033W	TLG2	Q08144	397 aa		4.25	□□□□□ -1.73
HCA4	YJL033W	VHS3	Q08438	674 aa		4.25	□□□□□ -1.73
HCA4	YJL033W	CLF1	Q12309	687 aa	Predicted RBP	4.25	□□□□□ -1.73
HCA4	YJL033W	YRF1-4	O13559	1382 aa		4.25	□□□□□ -1.73
HCA4	YJL033W	RPO41	P13433	1351 aa	Known RBP	4.25	□□□□□ -1.73
HCA4	YJL033W	MSH1	P25846	959 aa		4.24	□□□□□ -1.73
HCA4	YJL033W	PET127	P32606	800 aa		4.24	□□□□□ -1.73
HCA4	YJL033W	MRPL10	P36520	322 aa		4.24	□□□□□ -1.73
HCA4	YJL033W	PCL5	P38794	229 aa		4.24	□□□□□ -1.73
HCA4	YJL033W	OAF1	P39720	1047 aa	Predicted RBP	4.24	□□□□□ -1.73
HCA4	YJL033W	MNN11	P46985	422 aa	Known RBP	4.24	□□□□□ -1.73
HCA4	YJL033W	PAN2	P53010	1115 aa	Predicted RBP	4.24	□□□□□ -1.73
HCA4	YJL033W	ERV41	Q04651	352 aa		4.24	□□□□□ -1.73
HCA4	YJL033W	DID4	P36108	232 aa		4.24	□□□□□ -1.73
HCA4	YJL033W	YNL195C	P40168	261 aa		4.24	□□□□□ -1.73
HCA4	YJL033W	YNL050C	P53952	270 aa		4.24	□□□□□ -1.73
HCA4	YJL033W	ECM9	Q02202	377 aa		4.24	□□□□□ -1.73
HCA4	YJL033W	YLR407W	Q06070	228 aa		4.24	□□□□□ -1.73
HCA4	YJL033W	YKL068W-A	Q3E826	78 aa		4.24	□□□□□ -1.73
HCA4	YJL033W	ECM3	Q99252	613 aa		4.24	□□□□□ -1.73
HCA4	YJL033W	ERG20	P08524	352 aa	Known RBP	4.23	□□□□□ -1.73
HCA4	YJL033W	IMG2	P25642	146 aa	Predicted RBP	4.23	□□□□□ -1.73
HCA4	YJL033W	ZUO1	P32527	433 aa	Known RBP	4.23	□□□□□ -1.73
HCA4	YJL033W	SFB3	P38810	929 aa		4.23	□□□□□ -1.73
HCA4	YJL033W	BDH2	P39713	417 aa		4.23	□□□□□ -1.73
HCA4	YJL033W	RSM25	P40496	264 aa		4.23	□□□□□ -1.73
HCA4	YJL033W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
HCA4	YJL033W	HST1	P53685	503 aa		4.23	□□□□□ -1.73
HCA4	YJL033W	VPS64	Q03944	604 aa		4.23	□□□□□ -1.73
HCA4	YJL033W	VPS20	Q04272	221 aa		4.23	□□□□□ -1.73
HCA4	YJL033W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.23	□□□□□ -1.73
HCA4	YJL033W	TOP1	P04786	769 aa		4.23	□□□□□ -1.73
HCA4	YJL033W	SWI6	P09959	803 aa		4.23	□□□□□ -1.73
HCA4	YJL033W	FRS1	P15624	595 aa	Known RBP	4.23	□□□□□ -1.73
HCA4	YJL033W	YKU70	P32807	602 aa		4.23	□□□□□ -1.73
HCA4	YJL033W	TMN2	Q04562	672 aa		4.23	□□□□□ -1.73
HCA4	YJL033W	ZRT2	Q12436	422 aa		4.23	□□□□□ -1.73
HCA4	YJL033W	USO1	P25386	1790 aa		4.23	□□□□□ -1.73
HCA4	YJL033W	ADE6	P38972	1358 aa	Known RBP	4.23	□□□□□ -1.73
HCA4	YJL033W	VAS1	P07806	1104 aa	Known RBP	4.22	□□□□□ -1.73
HCA4	YJL033W	MRC1	P25588	1096 aa		4.22	□□□□□ -1.73
HCA4	YJL033W	NUP133	P36161	1157 aa		4.22	□□□□□ -1.73
HCA4	YJL033W	CBR1	P38626	284 aa	Known RBP	4.22	□□□□□ -1.73
HCA4	YJL033W	HXT6	P39003	570 aa	Known RBP	4.22	□□□□□ -1.73
HCA4	YJL033W	HXT7	P39004	570 aa		4.22	□□□□□ -1.73
HCA4	YJL033W	YGL082W	P53155	381 aa		4.22	□□□□□ -1.73
HCA4	YJL033W	VBA4	Q04602	768 aa	Known RBP	4.22	□□□□□ -1.73
HCA4	YJL033W	POM34	Q12445	299 aa		4.22	□□□□□ -1.73
HCA4	YJL033W	YIL177C	P40434	1758 aa		4.22	□□□□□ -1.73
HCA4	YJL033W	YJL225C	P40889	1758 aa		4.22	□□□□□ -1.73
HCA4	YJL033W	SEC65	P29478	273 aa		4.22	□□□□□ -1.73
HCA4	YJL033W	MPE1	P35728	441 aa	Known RBP	4.22	□□□□□ -1.73
HCA4	YJL033W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
HCA4	YJL033W	YEN1	P40028	759 aa		4.22	□□□□□ -1.73
HCA4	YJL033W	SDS3	P40505	327 aa		4.22	□□□□□ -1.73
HCA4	YJL033W	FHN1	P53279	174 aa		4.22	□□□□□ -1.73
HCA4	YJL033W	PXR1	P53335	271 aa	Predicted RBP	4.22	□□□□□ -1.73
HCA4	YJL033W	PTA1	Q01329	785 aa	Predicted RBP	4.22	□□□□□ -1.73
HCA4	YJL033W	YHM2	Q04013	314 aa		4.22	□□□□□ -1.73
HCA4	YJL033W	GYL1	Q04322	720 aa		4.22	□□□□□ -1.73
HCA4	YJL033W	YPL225W	Q08971	146 aa	Known RBP	4.22	□□□□□ -1.73
HCA4	YJL033W	SES1	P07284	462 aa	Known RBP	4.21	□□□□□ -1.74
HCA4	YJL033W	SEC15	P22224	910 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	KIN82	P25341	720 aa		4.21	□□□□□ -1.74
HCA4	YJL033W	DPH5	P32469	300 aa	Predicted RBP	4.21	□□□□□ -1.74
HCA4	YJL033W	RPS0A	P32905	252 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms