RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W HNT2P49775 206 aa6.9□□□□□ -1.3
MSP1YGR028W TNA1P53322 534 aa6.9□□□□□ -1.3
MSP1YGR028W STP1Q00947 519 aa6.9□□□□□ -1.3
MSP1YGR028W VMS1Q04311 632 aaKnown RBP6.9□□□□□ -1.3
MSP1YGR028W JIP5Q06214 492 aaPredicted RBP6.9□□□□□ -1.3
MSP1YGR028W PEX19Q07418 342 aa6.9□□□□□ -1.3
MSP1YGR028W CTF3Q12748 733 aa6.9□□□□□ -1.3
MSP1YGR028W PGS1P25578 521 aa6.89□□□□□ -1.31
MSP1YGR028W IMG2P25642 146 aaPredicted RBP6.89□□□□□ -1.31
MSP1YGR028W PIN4P34217 668 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
MSP1YGR028W HMT1P38074 348 aa6.89□□□□□ -1.31
MSP1YGR028W SIP5P40210 489 aaKnown RBP6.89□□□□□ -1.31
MSP1YGR028W YGR053CP53234 283 aa6.89□□□□□ -1.31
MSP1YGR028W ORC3P54790 616 aa6.89□□□□□ -1.31
MSP1YGR028W HOS3Q02959 697 aaKnown RBP6.89□□□□□ -1.31
MSP1YGR028W VPS16Q03308 798 aa6.89□□□□□ -1.31
MSP1YGR028W CEF1Q03654 590 aaPredicted RBP6.89□□□□□ -1.31
MSP1YGR028W MLH2Q07980 695 aa6.89□□□□□ -1.31
MSP1YGR028W NBA1Q08229 501 aaKnown RBP6.89□□□□□ -1.31
MSP1YGR028W ATP1P07251 545 aaKnown RBP6.88□□□□□ -1.31
MSP1YGR028W PCT1P13259 424 aa6.88□□□□□ -1.31
MSP1YGR028W SAM35P14693 329 aa6.88□□□□□ -1.31
MSP1YGR028W CYS3P31373 394 aaKnown RBP6.88□□□□□ -1.31
MSP1YGR028W SAC6P32599 642 aaKnown RBP6.88□□□□□ -1.31
MSP1YGR028W YKL091CP33324 310 aaKnown RBP6.88□□□□□ -1.31
MSP1YGR028W COY1P34237 679 aa6.88□□□□□ -1.31
MSP1YGR028W NPP2P39997 493 aa6.88□□□□□ -1.31
MSP1YGR028W YIR014WP40570 242 aa6.88□□□□□ -1.31
MSP1YGR028W LCB2P40970 561 aa6.88□□□□□ -1.31
MSP1YGR028W TOS3P43637 560 aa6.88□□□□□ -1.31
MSP1YGR028W IRC10Q08118 586 aa6.88□□□□□ -1.31
MSP1YGR028W SDH5Q08230 162 aa6.88□□□□□ -1.31
MSP1YGR028W YOL075CQ08234 1294 aa6.88□□□□□ -1.31
MSP1YGR028W SPO21Q12411 609 aa6.88□□□□□ -1.31
MSP1YGR028W GAL80P04387 435 aa6.87□□□□□ -1.31
MSP1YGR028W SSB1P11484 613 aaKnown RBP6.87□□□□□ -1.31
MSP1YGR028W IME1P21190 360 aa6.87□□□□□ -1.31
MSP1YGR028W VPS3P23643 1011 aa6.87□□□□□ -1.31
MSP1YGR028W PUP3P25451 205 aaKnown RBP6.87□□□□□ -1.31
MSP1YGR028W PRO1P32264 428 aa6.87□□□□□ -1.31
MSP1YGR028W AGP2P38090 596 aa6.87□□□□□ -1.31
MSP1YGR028W YBR284WP38150 797 aa6.87□□□□□ -1.31
MSP1YGR028W RFT1P38206 574 aaPredicted RBP6.87□□□□□ -1.31
MSP1YGR028W CCZ1P38273 704 aa6.87□□□□□ -1.31
MSP1YGR028W YHR054CP38780 354 aa6.87□□□□□ -1.31
MSP1YGR028W NMD3P38861 518 aaKnown RBP6.87□□□□□ -1.31
MSP1YGR028W UBP5P39944 805 aa6.87□□□□□ -1.31
MSP1YGR028W SSB2P40150 613 aaKnown RBP6.87□□□□□ -1.31
MSP1YGR028W POL31P46957 487 aa6.87□□□□□ -1.31
MSP1YGR028W TYW3P53177 273 aa6.87□□□□□ -1.31
MSP1YGR028W CWC24P53769 259 aa6.87□□□□□ -1.31
MSP1YGR028W TIM8P57744 87 aa6.87□□□□□ -1.31
MSP1YGR028W SSY1Q03770 852 aa6.87□□□□□ -1.31
MSP1YGR028W TIF35Q04067 274 aaKnown RBP6.87□□□□□ -1.31
MSP1YGR028W SPO20Q04359 397 aa6.87□□□□□ -1.31
MSP1YGR028W HCR1Q05775 265 aaKnown RBP6.87□□□□□ -1.31
MSP1YGR028W FMP25Q08023 583 aa6.87□□□□□ -1.31
MSP1YGR028W TCO89Q08921 799 aa6.87□□□□□ -1.31
MSP1YGR028W SLX4Q12098 748 aa6.87□□□□□ -1.31
MSP1YGR028W APM4Q99186 491 aa6.87□□□□□ -1.31
MSP1YGR028W YLR422WQ06409 1932 aa6.86□□□□□ -1.31
MSP1YGR028W KGD2P19262 463 aaPredicted RBP6.86□□□□□ -1.31
MSP1YGR028W PUF4P25339 888 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
MSP1YGR028W VPH1P32563 840 aaKnown RBP6.86□□□□□ -1.31
MSP1YGR028W YBR056WP38081 501 aa6.86□□□□□ -1.31
MSP1YGR028W BAP2P38084 609 aa6.86□□□□□ -1.31
MSP1YGR028W SIF2P38262 535 aa6.86□□□□□ -1.31
MSP1YGR028W RIM4P38741 713 aa6.86□□□□□ -1.31
MSP1YGR028W MPH1P40562 993 aa6.86□□□□□ -1.31
MSP1YGR028W FYV8P46949 817 aaKnown RBP6.86□□□□□ -1.31
MSP1YGR028W ART5P53244 586 aaKnown RBP6.86□□□□□ -1.31
MSP1YGR028W SDH1Q00711 640 aa6.86□□□□□ -1.31
MSP1YGR028W ADA2Q02336 434 aa6.86□□□□□ -1.31
MSP1YGR028W MED1Q12321 566 aa6.86□□□□□ -1.31
MSP1YGR028W HRT3Q12347 344 aa6.86□□□□□ -1.31
MSP1YGR028W TRP2P00899 507 aaKnown RBP6.85□□□□□ -1.31
MSP1YGR028W PEX34P25584 144 aa6.85□□□□□ -1.31
MSP1YGR028W PSO2P30620 661 aa6.85□□□□□ -1.31
MSP1YGR028W MLS1P30952 554 aa6.85□□□□□ -1.31
MSP1YGR028W CBF2P32504 956 aa6.85□□□□□ -1.31
MSP1YGR028W PTC7P38797 343 aa6.85□□□□□ -1.31
MSP1YGR028W YER130CP39959 443 aa6.85□□□□□ -1.31
MSP1YGR028W NRD1P53617 575 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31 RIP-Chip
MSP1YGR028W SLG1P54867 378 aa6.85□□□□□ -1.31
MSP1YGR028W LEA1Q08963 238 aaPredicted RBP6.85□□□□□ -1.31
MSP1YGR028W GNT1Q12096 491 aa6.85□□□□□ -1.31
MSP1YGR028W SGT2Q12118 346 aaKnown RBP6.85□□□□□ -1.31
MSP1YGR028W FAB1P34756 2278 aa6.84□□□□□ -1.31
MSP1YGR028W HMG2P12684 1045 aa6.84□□□□□ -1.31
MSP1YGR028W OM45P16547 393 aa6.84□□□□□ -1.31
MSP1YGR028W SLA2P33338 968 aa6.84□□□□□ -1.31
MSP1YGR028W MCM7P38132 845 aa6.84□□□□□ -1.31
MSP1YGR028W PIK1P39104 1066 aa6.84□□□□□ -1.31
MSP1YGR028W DON1Q05610 365 aa6.84□□□□□ -1.31
MSP1YGR028W RSC58Q07979 502 aa6.84□□□□□ -1.31
MSP1YGR028W AFT2Q08957 416 aa6.84□□□□□ -1.31
MSP1YGR028W GPA1P08539 472 aa6.83□□□□□ -1.32
MSP1YGR028W RRT12P25381 491 aa6.83□□□□□ -1.32
MSP1YGR028W YKT6P36015 200 aaKnown RBP6.83□□□□□ -1.32
MSP1YGR028W FTR1P40088 404 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 94.5 ms