RNA–Protein interactions for RNA: YEL004W

YEA4, Transcript of Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter, yeast

Gene YEA4, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEA4	YEL004W	WHI2	P12611	486 aa		4.72	□□□□□ -1.65
YEA4	YEL004W	FAT1	P38225	669 aa		4.72	□□□□□ -1.65
YEA4	YEL004W	PMT3	P47190	753 aa		4.72	□□□□□ -1.65
YEA4	YEL004W	HOP1	P20050	605 aa		4.71	□□□□□ -1.66
YEA4	YEL004W	YDL183C	P48569	320 aa		4.71	□□□□□ -1.66
YEA4	YEL004W	NSE5	Q03718	556 aa		4.71	□□□□□ -1.66
YEA4	YEL004W	YHM2	Q04013	314 aa		4.71	□□□□□ -1.66
YEA4	YEL004W	YTM1	Q12024	460 aa	Predicted RBP	4.71	□□□□□ -1.66
YEA4	YEL004W	CDC26	P14724	124 aa		4.7	□□□□□ -1.66
YEA4	YEL004W	RNR3	P21672	869 aa	Known RBP	4.7	□□□□□ -1.66
YEA4	YEL004W	OAF3	P36023	863 aa		4.7	□□□□□ -1.66
YEA4	YEL004W	YPT10	P38146	199 aa		4.7	□□□□□ -1.66
YEA4	YEL004W	MEP2	P41948	499 aa		4.7	□□□□□ -1.66
YEA4	YEL004W	STB2	P46679	850 aa		4.7	□□□□□ -1.66
YEA4	YEL004W	SAP4	P53036	818 aa		4.7	□□□□□ -1.66
YEA4	YEL004W	ERG13	P54839	491 aa	Known RBP	4.7	□□□□□ -1.66
YEA4	YEL004W	UME1	Q03010	460 aa		4.7	□□□□□ -1.66
YEA4	YEL004W	ARR3	Q06598	404 aa		4.7	□□□□□ -1.66
YEA4	YEL004W	HFI1	Q12060	488 aa		4.7	□□□□□ -1.66
YEA4	YEL004W	RPS21A	P0C0V8	87 aa	Known RBP	4.69	□□□□□ -1.66
YEA4	YEL004W	YHR033W	P38690	423 aa		4.69	□□□□□ -1.66
YEA4	YEL004W	YEL025C	P39991	1188 aa		4.69	□□□□□ -1.66
YEA4	YEL004W	VID28	P40547	921 aa		4.69	□□□□□ -1.66
YEA4	YEL004W	MNN11	P46985	422 aa	Known RBP	4.69	□□□□□ -1.66
YEA4	YEL004W	IRC8	P47046	822 aa		4.69	□□□□□ -1.66
YEA4	YEL004W	YNR029C	P53729	429 aa	Known RBP	4.69	□□□□□ -1.66
YEA4	YEL004W	PTA1	Q01329	785 aa	Predicted RBP	4.69	□□□□□ -1.66
YEA4	YEL004W	YCG1	Q06680	1035 aa		4.69	□□□□□ -1.66
YEA4	YEL004W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
YEA4	YEL004W	YLR111W	Q12528	110 aa		4.69	□□□□□ -1.66
YEA4	YEL004W	DHR2	P36009	735 aa	Predicted RBP	4.68	□□□□□ -1.66
YEA4	YEL004W	DID4	P36108	232 aa		4.68	□□□□□ -1.66
YEA4	YEL004W	OAF1	P39720	1047 aa	Predicted RBP	4.68	□□□□□ -1.66
YEA4	YEL004W	LRO1	P40345	661 aa		4.68	□□□□□ -1.66
YEA4	YEL004W	PCL8	Q08966	492 aa		4.68	□□□□□ -1.66
YEA4	YEL004W	APM4	Q99186	491 aa		4.68	□□□□□ -1.66
YEA4	YEL004W	YMR084W	A2P2R3	262 aa		4.67	□□□□□ -1.66
YEA4	YEL004W	GSY2	P27472	705 aa		4.67	□□□□□ -1.66
YEA4	YEL004W	SNO3	P43544	222 aa		4.67	□□□□□ -1.66
YEA4	YEL004W	ATG36	P46983	293 aa		4.67	□□□□□ -1.66
YEA4	YEL004W	YJR142W	P47173	342 aa		4.67	□□□□□ -1.66
YEA4	YEL004W	BSP1	Q06604	576 aa		4.67	□□□□□ -1.66
YEA4	YEL004W	YGR161W-C	Q3E744	92 aa		4.67	□□□□□ -1.66
YEA4	YEL004W	NUP145	P49687	1317 aa		4.67	□□□□□ -1.66
YEA4	YEL004W	CAP1	P28495	268 aa	Known RBP	4.66	□□□□□ -1.66
YEA4	YEL004W	APD1	P38281	316 aa		4.66	□□□□□ -1.66
YEA4	YEL004W	OPT1	P40897	799 aa		4.66	□□□□□ -1.66
YEA4	YEL004W	USA1	Q03714	838 aa		4.66	□□□□□ -1.66
YEA4	YEL004W	AIM41	Q12032	185 aa		4.66	□□□□□ -1.66
YEA4	YEL004W	HMG2	P12684	1045 aa		4.65	□□□□□ -1.67
YEA4	YEL004W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
YEA4	YEL004W	URE2	P23202	354 aa	Known RBP	4.65	□□□□□ -1.67
YEA4	YEL004W	MF(ALPHA)2	P32435	120 aa		4.65	□□□□□ -1.67
YEA4	YEL004W	LOT5	P34234	306 aa		4.65	□□□□□ -1.67
YEA4	YEL004W	CCL1	P37366	393 aa		4.65	□□□□□ -1.67
YEA4	YEL004W	BRN1	P38170	754 aa		4.65	□□□□□ -1.67
YEA4	YEL004W	FPR3	P38911	411 aa	Known RBP	4.65	□□□□□ -1.67
YEA4	YEL004W	GPP1	P41277	250 aa	Known RBP	4.65	□□□□□ -1.67
YEA4	YEL004W	ENP2	P48234	707 aa	Known RBP	4.65	□□□□□ -1.67
YEA4	YEL004W	GPG1	P53130	126 aa		4.65	□□□□□ -1.67
YEA4	YEL004W	SCW4	P53334	386 aa	Known RBP	4.65	□□□□□ -1.67
YEA4	YEL004W	WAR1	Q03631	944 aa		4.65	□□□□□ -1.67
YEA4	YEL004W	TGS1	Q12052	315 aa		4.65	□□□□□ -1.67
YEA4	YEL004W	RDL1	Q12305	139 aa	Known RBP	4.65	□□□□□ -1.67
YEA4	YEL004W	EUG1	P32474	517 aa		4.64	□□□□□ -1.67
YEA4	YEL004W	TDA10	P42938	290 aa		4.64	□□□□□ -1.67
YEA4	YEL004W	YGR237C	P50089	785 aa		4.64	□□□□□ -1.67
YEA4	YEL004W	IDP3	P53982	420 aa	Known RBP	4.64	□□□□□ -1.67
YEA4	YEL004W	FAP7	Q12055	197 aa	Predicted RBP	4.64	□□□□□ -1.67
YEA4	YEL004W	YMR085W	P0CF18	432 aa		4.63	□□□□□ -1.67
YEA4	YEL004W	YAP1	P19880	650 aa	Known RBP	4.63	□□□□□ -1.67
YEA4	YEL004W	TSR4	P25040	408 aa		4.63	□□□□□ -1.67
YEA4	YEL004W	DGR2	P32330	852 aa		4.63	□□□□□ -1.67
YEA4	YEL004W	MNT3	P40549	630 aa		4.63	□□□□□ -1.67
YEA4	YEL004W	SAE2	P46946	345 aa		4.63	□□□□□ -1.67
YEA4	YEL004W	GFD1	Q04839	188 aa	Known RBP	4.63	□□□□□ -1.67
YEA4	YEL004W	CRC1	Q12289	327 aa		4.63	□□□□□ -1.67
YEA4	YEL004W	ASK1	P35734	292 aa		4.62	□□□□□ -1.67
YEA4	YEL004W	RMA1	P36001	430 aa	Known RBP	4.62	□□□□□ -1.67
YEA4	YEL004W	PCI8	P40512	444 aa		4.62	□□□□□ -1.67
YEA4	YEL004W	TUF1	P02992	437 aa	Known RBP	4.61	□□□□□ -1.67
YEA4	YEL004W	YJU2	P28320	278 aa	Predicted RBP	4.61	□□□□□ -1.67
YEA4	YEL004W	JHD1	P40034	492 aa		4.61	□□□□□ -1.67
YEA4	YEL004W	VPS33	P20795	691 aa		4.6	□□□□□ -1.67
YEA4	YEL004W	RGT1	P32862	1170 aa		4.6	□□□□□ -1.67
YEA4	YEL004W	YJL193W	P39542	402 aa		4.6	□□□□□ -1.67
YEA4	YEL004W	HRD3	Q05787	833 aa		4.6	□□□□□ -1.67
YEA4	YEL004W	SPN1	Q06505	410 aa	Predicted RBP	4.6	□□□□□ -1.67
YEA4	YEL004W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
YEA4	YEL004W	HXT4	P32467	576 aa		4.59	□□□□□ -1.67
YEA4	YEL004W	PXL1	P36166	706 aa		4.59	□□□□□ -1.67
YEA4	YEL004W	RNR4	P49723	345 aa	Known RBP	4.59	□□□□□ -1.67
YEA4	YEL004W	HER1	Q12276	1246 aa		4.59	□□□□□ -1.67
YEA4	YEL004W	YPK1	P12688	680 aa	Known RBP	4.58	□□□□□ -1.68
YEA4	YEL004W	YIL024C	P40543	189 aa		4.58	□□□□□ -1.68
YEA4	YEL004W	SQS1	P53866	767 aa	Known RBP	4.58	□□□□□ -1.68
YEA4	YEL004W	TPO3	Q06451	622 aa		4.58	□□□□□ -1.68
YEA4	YEL004W	NGL1	Q08213	363 aa	Known RBP	4.58	□□□□□ -1.68
YEA4	YEL004W	PCK1	P10963	549 aa		4.57	□□□□□ -1.68
YEA4	YEL004W	ATP12	P22135	325 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms