RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPR28	YDR218C	GUK1	P15454	187 aa	Known RBP	4.98	□□□□□ -1.61
SPR28	YDR218C	UBC1	P21734	215 aa	Known RBP	4.98	□□□□□ -1.61
SPR28	YDR218C	MNE1	P24720	663 aa		4.98	□□□□□ -1.61
SPR28	YDR218C	CDC12	P32468	407 aa	Known RBP	4.98	□□□□□ -1.61
SPR28	YDR218C	RMA1	P36001	430 aa	Known RBP	4.98	□□□□□ -1.61
SPR28	YDR218C	TEF4	P36008	412 aa	Known RBP	4.98	□□□□□ -1.61
SPR28	YDR218C	RFC1	P38630	861 aa	Known RBP	4.98	□□□□□ -1.61
SPR28	YDR218C	RRF1	P38771	230 aa		4.98	□□□□□ -1.61
SPR28	YDR218C	AXL2	P38928	823 aa		4.98	□□□□□ -1.61
SPR28	YDR218C	HXT6	P39003	570 aa	Known RBP	4.98	□□□□□ -1.61
SPR28	YDR218C	HXT7	P39004	570 aa		4.98	□□□□□ -1.61
SPR28	YDR218C	YER010C	P40011	234 aa		4.98	□□□□□ -1.61
SPR28	YDR218C	HST1	P53685	503 aa		4.98	□□□□□ -1.61
SPR28	YDR218C	CSR1	Q06705	408 aa	Known RBP	4.98	□□□□□ -1.61
SPR28	YDR218C	ENV7	Q12003	364 aa		4.98	□□□□□ -1.61
SPR28	YDR218C	CWC2	Q12046	339 aa	Predicted RBP	4.98	□□□□□ -1.61
SPR28	YDR218C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
SPR28	YDR218C	INO80	P53115	1489 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	HSF1	P10961	833 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	SGF29	P25554	259 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	CNS1	P33313	385 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	ERT1	P38140	529 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	YBR225W	P38321	900 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	SEC28	P40509	296 aa	Known RBP	4.97	□□□□□ -1.61
SPR28	YDR218C	DJP1	P40564	432 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	LYS14	P40971	790 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	SHR5	P41912	237 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	YFL052W	P43551	465 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	NNF2	P53253	936 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	BSC5	P53755	489 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
SPR28	YDR218C	PEX25	Q02969	394 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
SPR28	YDR218C	HUA2	Q12134	243 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	SKM1	Q12469	655 aa		4.97	□□□□□ -1.61
SPR28	YDR218C	RPS21B	Q3E754	87 aa	Known RBP	4.97	□□□□□ -1.61
SPR28	YDR218C	DIF1	O13577	133 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	CLB4	P24871	460 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	KAR4	P25583	335 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	TGL1	P34163	548 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	YLF2	P38746	405 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	YHR202W	P38887	602 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	STL1	P39932	569 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	YEL025C	P39991	1188 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	PCL7	P40186	285 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	YJL055W	P47044	245 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	MAD3	P47074	515 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	ADA2	Q02336	434 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	APL4	Q12028	832 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	NBP2	Q12163	236 aa		4.96	□□□□□ -1.62
SPR28	YDR218C	PAR32	Q12515	295 aa	Known RBP	4.96	□□□□□ -1.62
SPR28	YDR218C	SEC53	P07283	254 aa	Known RBP	4.95	□□□□□ -1.62
SPR28	YDR218C	VAS1	P07806	1104 aa	Known RBP	4.95	□□□□□ -1.62
SPR28	YDR218C	SAC6	P32599	642 aa	Known RBP	4.95	□□□□□ -1.62
SPR28	YDR218C	YPT53	P36019	220 aa		4.95	□□□□□ -1.62
SPR28	YDR218C	SAP190	P36123	1033 aa		4.95	□□□□□ -1.62
SPR28	YDR218C	SRP68	P38687	599 aa	Known RBP	4.95	□□□□□ -1.62
SPR28	YDR218C	RTT105	P40063	208 aa		4.95	□□□□□ -1.62
SPR28	YDR218C	SCS2	P40075	244 aa	Known RBP	4.95	□□□□□ -1.62
SPR28	YDR218C	PUG1	P40100	303 aa		4.95	□□□□□ -1.62
SPR28	YDR218C	RLP7	P40693	322 aa	Known RBP	4.95	□□□□□ -1.62
SPR28	YDR218C	RMD8	P43620	662 aa		4.95	□□□□□ -1.62
SPR28	YDR218C	POL31	P46957	487 aa		4.95	□□□□□ -1.62
SPR28	YDR218C	CTF18	P49956	741 aa		4.95	□□□□□ -1.62
SPR28	YDR218C	CPR6	P53691	371 aa	Known RBP	4.95	□□□□□ -1.62
SPR28	YDR218C	NOG2	P53742	486 aa	Known RBP	4.95	□□□□□ -1.62
SPR28	YDR218C	GRX3	Q03835	250 aa		4.95	□□□□□ -1.62
SPR28	YDR218C	GAD1	Q04792	585 aa		4.95	□□□□□ -1.62
SPR28	YDR218C	RPN7	Q06103	429 aa	Known RBP	4.95	□□□□□ -1.62
SPR28	YDR218C	YLR040C	Q07988	224 aa		4.95	□□□□□ -1.62
SPR28	YDR218C	AIM39	Q08223	395 aa		4.95	□□□□□ -1.62
SPR28	YDR218C	ENB1	Q08299	606 aa		4.95	□□□□□ -1.62
SPR28	YDR218C	CUE5	Q08412	411 aa	Known RBP	4.95	□□□□□ -1.62
SPR28	YDR218C	RVB2	Q12464	471 aa	Known RBP	4.95	□□□□□ -1.62
SPR28	YDR218C	RPP2A	P05319	106 aa	Known RBP	4.94	□□□□□ -1.62
SPR28	YDR218C	MET17	P06106	444 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	RFA1	P22336	621 aa	Known RBP	4.94	□□□□□ -1.62
SPR28	YDR218C	MCM3	P24279	971 aa	Known RBP	4.94	□□□□□ -1.62
SPR28	YDR218C	IME2	P32581	645 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	AFR1	P33304	620 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	YKR078W	P36158	585 aa	Known RBP	4.94	□□□□□ -1.62
SPR28	YDR218C	MOH1	P38191	138 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	TIF5	P38431	405 aa	Known RBP	4.94	□□□□□ -1.62
SPR28	YDR218C	SWD1	P39706	426 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	LSM5	P40089	93 aa	Known RBP	4.94	□□□□□ -1.62
SPR28	YDR218C	PRM2	P40534	656 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	IMA5	P40884	581 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	ART5	P53244	586 aa	Known RBP	4.94	□□□□□ -1.62
SPR28	YDR218C	JJJ1	P53863	590 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	ZDS2	P54786	942 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	TIM11	P81449	96 aa	Predicted RBP	4.94	□□□□□ -1.62
SPR28	YDR218C	GPD1	Q00055	391 aa	Known RBP	4.94	□□□□□ -1.62
SPR28	YDR218C	YML119W	Q03208	357 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	PRP42	Q03776	544 aa	Known RBP	4.94	□□□□□ -1.62
SPR28	YDR218C	SWA2	Q06677	668 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	APC5	Q08683	685 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	TRM8	Q12009	286 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	PLP2	Q12017	286 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	REX3	Q12090	404 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	UPC2	Q12151	913 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms