RNA–Protein interactions for RNA: YDR118W

APC4, Transcript of Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), yeast

Gene APC4, Length 1,959 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC4	YDR118W	HMT1	P38074	348 aa		4.82	□□□□□ -1.64
APC4	YDR118W	YBR284W	P38150	797 aa		4.82	□□□□□ -1.64
APC4	YDR118W	POP4	P38336	279 aa		4.82	□□□□□ -1.64
APC4	YDR118W	RAD55	P38953	406 aa		4.82	□□□□□ -1.64
APC4	YDR118W	FLC2	P39719	783 aa		4.82	□□□□□ -1.64
APC4	YDR118W	INA22	P40576	216 aa		4.82	□□□□□ -1.64
APC4	YDR118W	RGD2	P43556	714 aa		4.82	□□□□□ -1.64
APC4	YDR118W	YGR283C	P53336	341 aa	Predicted RBP	4.82	□□□□□ -1.64
APC4	YDR118W	BET4	Q00618	327 aa		4.82	□□□□□ -1.64
APC4	YDR118W	YPL062W	Q02781	134 aa		4.82	□□□□□ -1.64
APC4	YDR118W	SPR28	Q04921	423 aa		4.82	□□□□□ -1.64
APC4	YDR118W	APC5	Q08683	685 aa		4.82	□□□□□ -1.64
APC4	YDR118W	THI21	Q08975	551 aa		4.82	□□□□□ -1.64
APC4	YDR118W	FAP7	Q12055	197 aa	Predicted RBP	4.82	□□□□□ -1.64
APC4	YDR118W	APM4	Q99186	491 aa		4.82	□□□□□ -1.64
APC4	YDR118W	YML002W	P0CF17	737 aa		4.82	□□□□□ -1.64
APC4	YDR118W	PEP5	P12868	1029 aa		4.82	□□□□□ -1.64
APC4	YDR118W	KGD2	P19262	463 aa	Predicted RBP	4.82	□□□□□ -1.64
APC4	YDR118W	GAL11	P19659	1081 aa		4.82	□□□□□ -1.64
APC4	YDR118W	PEX2	P32800	271 aa		4.82	□□□□□ -1.64
APC4	YDR118W	NMD3	P38861	518 aa	Known RBP	4.82	□□□□□ -1.64
APC4	YDR118W	CIN4	P39110	191 aa		4.82	□□□□□ -1.64
APC4	YDR118W	ERP2	P39704	215 aa		4.82	□□□□□ -1.64
APC4	YDR118W	TGL3	P40308	642 aa		4.82	□□□□□ -1.64
APC4	YDR118W	ALY2	P47029	1046 aa		4.82	□□□□□ -1.64
APC4	YDR118W	YJL045W	P47052	634 aa		4.82	□□□□□ -1.64
APC4	YDR118W	HLJ1	P48353	224 aa		4.82	□□□□□ -1.64
APC4	YDR118W	MTO1	P53070	669 aa		4.82	□□□□□ -1.64
APC4	YDR118W	NUT1	P53114	1132 aa		4.82	□□□□□ -1.64
APC4	YDR118W	PNP1	Q05788	311 aa		4.82	□□□□□ -1.64
APC4	YDR118W	STE23	Q06010	1027 aa		4.82	□□□□□ -1.64
APC4	YDR118W	RUD3	Q12234	484 aa	Known RBP	4.82	□□□□□ -1.64
APC4	YDR118W	HRT3	Q12347	344 aa		4.82	□□□□□ -1.64
APC4	YDR118W	PRC1	P00729	532 aa		4.81	□□□□□ -1.64
APC4	YDR118W	ARG4	P04076	463 aa	Predicted RBP	4.81	□□□□□ -1.64
APC4	YDR118W	ATP1	P07251	545 aa	Known RBP	4.81	□□□□□ -1.64
APC4	YDR118W	GCR1	P07261	785 aa		4.81	□□□□□ -1.64
APC4	YDR118W	HXT3	P32466	567 aa	Known RBP	4.81	□□□□□ -1.64
APC4	YDR118W	VPH1	P32563	840 aa	Known RBP	4.81	□□□□□ -1.64
APC4	YDR118W	GCS1	P35197	352 aa		4.81	□□□□□ -1.64
APC4	YDR118W	RPC37	P36121	282 aa		4.81	□□□□□ -1.64
APC4	YDR118W	YBR056W	P38081	501 aa		4.81	□□□□□ -1.64
APC4	YDR118W	MGE1	P38523	228 aa		4.81	□□□□□ -1.64
APC4	YDR118W	CCT2	P39076	527 aa	Known RBP	4.81	□□□□□ -1.64
APC4	YDR118W	PRK1	P40494	810 aa		4.81	□□□□□ -1.64
APC4	YDR118W	CDC1	P40986	491 aa		4.81	□□□□□ -1.64
APC4	YDR118W	TAF1	P46677	1066 aa		4.81	□□□□□ -1.64
APC4	YDR118W	GUF1	P46943	645 aa		4.81	□□□□□ -1.64
APC4	YDR118W	VTC4	P47075	721 aa		4.81	□□□□□ -1.64
APC4	YDR118W	RSM26	P47141	266 aa		4.81	□□□□□ -1.64
APC4	YDR118W	CPR6	P53691	371 aa	Known RBP	4.81	□□□□□ -1.64
APC4	YDR118W	ADA2	Q02336	434 aa		4.81	□□□□□ -1.64
APC4	YDR118W	RNT1	Q02555	471 aa		4.81	□□□□□ -1.64
APC4	YDR118W	YDL121C	Q07541	149 aa		4.81	□□□□□ -1.64
APC4	YDR118W	IZH4	Q99393	312 aa		4.81	□□□□□ -1.64
APC4	YDR118W	ADH4	P10127	382 aa		4.8	□□□□□ -1.64
APC4	YDR118W	CDC24	P11433	854 aa	Predicted RBP	4.8	□□□□□ -1.64
APC4	YDR118W	YCR015C	P25616	317 aa		4.8	□□□□□ -1.64
APC4	YDR118W	MGT1	P26188	188 aa		4.8	□□□□□ -1.64
APC4	YDR118W	DUG2	P38149	878 aa		4.8	□□□□□ -1.64
APC4	YDR118W	YBR053C	P38235	358 aa		4.8	□□□□□ -1.64
APC4	YDR118W	RGD1	P38339	666 aa		4.8	□□□□□ -1.64
APC4	YDR118W	TAT2	P38967	592 aa		4.8	□□□□□ -1.64
APC4	YDR118W	YFL052W	P43551	465 aa		4.8	□□□□□ -1.64
APC4	YDR118W	PEX31	P53203	462 aa		4.8	□□□□□ -1.64
APC4	YDR118W	INA17	Q02888	182 aa		4.8	□□□□□ -1.64
APC4	YDR118W	PNG1	Q02890	363 aa		4.8	□□□□□ -1.64
APC4	YDR118W	HRD3	Q05787	833 aa		4.8	□□□□□ -1.64
APC4	YDR118W	SFH1	Q06168	426 aa		4.8	□□□□□ -1.64
APC4	YDR118W	MRI1	Q06489	411 aa	Known RBP	4.8	□□□□□ -1.64
APC4	YDR118W	OMS1	Q06668	471 aa		4.8	□□□□□ -1.64
APC4	YDR118W	TPO1	Q07824	586 aa		4.8	□□□□□ -1.64
APC4	YDR118W	FRA1	Q07825	749 aa		4.8	□□□□□ -1.64
APC4	YDR118W	LEA1	Q08963	238 aa	Predicted RBP	4.8	□□□□□ -1.64
APC4	YDR118W	PIN2	Q12057	282 aa		4.8	□□□□□ -1.64
APC4	YDR118W	RRD2	Q12461	358 aa		4.8	□□□□□ -1.64
APC4	YDR118W	SEY1	Q99287	776 aa		4.8	□□□□□ -1.64
APC4	YDR118W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
APC4	YDR118W	HIP1	P06775	603 aa		4.8	□□□□□ -1.64
APC4	YDR118W	MAS1	P10507	462 aa		4.8	□□□□□ -1.64
APC4	YDR118W	CBF1	P17106	351 aa		4.8	□□□□□ -1.64
APC4	YDR118W	TPS2	P31688	896 aa	Known RBP	4.8	□□□□□ -1.64
APC4	YDR118W	ISF1	P32488	338 aa		4.8	□□□□□ -1.64
APC4	YDR118W	PEP7	P32609	515 aa		4.8	□□□□□ -1.64
APC4	YDR118W	YME1	P32795	747 aa		4.8	□□□□□ -1.64
APC4	YDR118W	MAP2	P38174	421 aa	Known RBP	4.8	□□□□□ -1.64
APC4	YDR118W	RFS1	P38234	210 aa	Known RBP	4.8	□□□□□ -1.64
APC4	YDR118W	SIF2	P38262	535 aa		4.8	□□□□□ -1.64
APC4	YDR118W	RIM4	P38741	713 aa		4.8	□□□□□ -1.64
APC4	YDR118W	JHD1	P40034	492 aa		4.8	□□□□□ -1.64
APC4	YDR118W	SMX2	P40204	77 aa	Known RBP	4.8	□□□□□ -1.64
APC4	YDR118W	RSC8	P43609	557 aa	Known RBP	4.8	□□□□□ -1.64
APC4	YDR118W	CTK3	P46963	296 aa	Predicted RBP	4.8	□□□□□ -1.64
APC4	YDR118W	YJR079W	P47126	109 aa		4.8	□□□□□ -1.64
APC4	YDR118W	MTD1	Q02046	320 aa	Known RBP	4.8	□□□□□ -1.64
APC4	YDR118W	SND1	Q04007	877 aa		4.8	□□□□□ -1.64
APC4	YDR118W	CDC73	Q06697	393 aa		4.8	□□□□□ -1.64
APC4	YDR118W	AAD4	Q07747	329 aa		4.8	□□□□□ -1.64
APC4	YDR118W	YOR238W	Q08634	303 aa		4.8	□□□□□ -1.64
APC4	YDR118W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms