RNA–Protein interactions for RNA: YDL149W

ATG9, Transcript of Transmembrane protein involved in forming Cvt and autophagic vesicles, yeastyeast

Gene ATG9, Length 2,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG9YDL149W MIC60P36112 540 aa2.04□□□□□ -2.08
ATG9YDL149W MRPL37P36532 105 aa2.04□□□□□ -2.08
ATG9YDL149W SHM1P37292 490 aaPredicted RBP2.04□□□□□ -2.08
ATG9YDL149W LSM5P40089 93 aaKnown RBP2.04□□□□□ -2.08
ATG9YDL149W LTP1P40347 161 aa2.04□□□□□ -2.08
ATG9YDL149W YJR061WP40355 935 aa2.04□□□□□ -2.08
ATG9YDL149W PRM2P40534 656 aa2.04□□□□□ -2.08
ATG9YDL149W NOP9P47077 666 aaKnown RBP2.04□□□□□ -2.08
ATG9YDL149W YJR039WP47107 1121 aa2.04□□□□□ -2.08
ATG9YDL149W TAF4P50105 388 aa2.04□□□□□ -2.08
ATG9YDL149W CUE3P53137 624 aaKnown RBP2.04□□□□□ -2.08
ATG9YDL149W NNF2P53253 936 aa2.04□□□□□ -2.08
ATG9YDL149W MPP6P53725 186 aaPredicted RBP2.04□□□□□ -2.08
ATG9YDL149W ARC35P53731 342 aaKnown RBP2.04□□□□□ -2.08
ATG9YDL149W YNL144CP53907 740 aa2.04□□□□□ -2.08
ATG9YDL149W ORC4P54791 529 aa2.04□□□□□ -2.08
ATG9YDL149W EGD1Q02642 157 aaKnown RBP2.04□□□□□ -2.08
ATG9YDL149W RRP17Q04031 235 aaPredicted RBP2.04□□□□□ -2.08
ATG9YDL149W LCD1Q04377 747 aa2.04□□□□□ -2.08
ATG9YDL149W YDR338CQ05497 695 aa2.04□□□□□ -2.08
ATG9YDL149W CIA1Q05583 330 aa2.04□□□□□ -2.08
ATG9YDL149W CRR1Q05790 422 aa2.04□□□□□ -2.08
ATG9YDL149W SMD2Q06217 110 aaKnown RBP2.04□□□□□ -2.08
ATG9YDL149W DIN7Q12086 430 aa2.04□□□□□ -2.08
ATG9YDL149W PSF3Q12146 194 aa2.04□□□□□ -2.08
ATG9YDL149W GET3Q12154 354 aaKnown RBP2.04□□□□□ -2.08
ATG9YDL149W RBD2Q12270 262 aa2.04□□□□□ -2.08
ATG9YDL149W AHC1Q12433 566 aa2.04□□□□□ -2.08
ATG9YDL149W ADF1Q2V2Q1 113 aa2.04□□□□□ -2.08
ATG9YDL149W IKI3Q06706 1349 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W PCK1P10963 549 aa2.03□□□□□ -2.08
ATG9YDL149W BET2P20133 325 aa2.03□□□□□ -2.08
ATG9YDL149W PWP1P21304 576 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W CBP3P21560 335 aa2.03□□□□□ -2.08
ATG9YDL149W ADK2P26364 225 aa2.03□□□□□ -2.08
ATG9YDL149W PRO3P32263 286 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W ECM4P36156 370 aa2.03□□□□□ -2.08
ATG9YDL149W IFA38P38286 347 aa2.03□□□□□ -2.08
ATG9YDL149W BSD2P38356 321 aa2.03□□□□□ -2.08
ATG9YDL149W PAC1P39946 494 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W CCT5P40413 562 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W RRN7P40992 514 aa2.03□□□□□ -2.08
ATG9YDL149W THI6P41835 540 aa2.03□□□□□ -2.08
ATG9YDL149W YRB1P41920 201 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W HXT10P43581 546 aa2.03□□□□□ -2.08
ATG9YDL149W EMC2P47133 292 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W RAD17P48581 401 aa2.03□□□□□ -2.08
ATG9YDL149W HNT2P49775 206 aa2.03□□□□□ -2.08
ATG9YDL149W PSP1P50896 841 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W ALT1P52893 592 aa2.03□□□□□ -2.08
ATG9YDL149W EFR3Q03653 782 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W CRF1Q04930 467 aa2.03□□□□□ -2.08
ATG9YDL149W DON1Q05610 365 aa2.03□□□□□ -2.08
ATG9YDL149W FMP45Q07651 309 aa2.03□□□□□ -2.08
ATG9YDL149W PML1Q07930 204 aaPredicted RBP2.03□□□□□ -2.08
ATG9YDL149W NOP12Q08208 459 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W TRM8Q12009 286 aa2.03□□□□□ -2.08
ATG9YDL149W RCN2Q12044 265 aa2.03□□□□□ -2.08
ATG9YDL149W WTM2Q12206 467 aa2.03□□□□□ -2.08
ATG9YDL149W COX17Q12287 69 aa2.03□□□□□ -2.08
ATG9YDL149W MRPL23Q12487 163 aaPredicted RBP2.03□□□□□ -2.08
ATG9YDL149W RPS21BQ3E754 87 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W AFI1Q99222 893 aa2.03□□□□□ -2.08
ATG9YDL149W YOR019WQ99248 730 aa2.03□□□□□ -2.08
ATG9YDL149W CAR2P07991 424 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W HSF1P10961 833 aa2.03□□□□□ -2.08
ATG9YDL149W CDC24P11433 854 aaPredicted RBP2.03□□□□□ -2.08
ATG9YDL149W SRV2P17555 526 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W MIH1P23748 554 aa2.03□□□□□ -2.08
ATG9YDL149W OCA4P25366 362 aa2.03□□□□□ -2.08
ATG9YDL149W SPS22P25380 463 aa2.03□□□□□ -2.08
ATG9YDL149W ITR1P30605 584 aa2.03□□□□□ -2.08
ATG9YDL149W HMX1P32339 317 aa2.03□□□□□ -2.08
ATG9YDL149W REC104P33323 182 aa2.03□□□□□ -2.08
ATG9YDL149W DAD2P36162 133 aa2.03□□□□□ -2.08
ATG9YDL149W GIP1P38229 639 aa2.03□□□□□ -2.08
ATG9YDL149W EAF5P39995 279 aa2.03□□□□□ -2.08
ATG9YDL149W FTR1P40088 404 aa2.03□□□□□ -2.08
ATG9YDL149W PUG1P40100 303 aa2.03□□□□□ -2.08
ATG9YDL149W SPO22P40511 975 aa2.03□□□□□ -2.08
ATG9YDL149W NUP85P46673 744 aa2.03□□□□□ -2.08
ATG9YDL149W GNP1P48813 663 aa2.03□□□□□ -2.08
ATG9YDL149W UBP15P50101 1230 aa2.03□□□□□ -2.08
ATG9YDL149W DSD1P53095 428 aa2.03□□□□□ -2.08
ATG9YDL149W UBP2Q01476 1272 aa2.03□□□□□ -2.08
ATG9YDL149W ISU1Q03020 165 aa2.03□□□□□ -2.08
ATG9YDL149W FDC1Q03034 503 aa2.03□□□□□ -2.08
ATG9YDL149W RRB1Q04225 511 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W SSQ1Q05931 657 aaPredicted RBP2.03□□□□□ -2.08
ATG9YDL149W YLR413WQ06689 675 aa2.03□□□□□ -2.08
ATG9YDL149W TCO89Q08921 799 aa2.03□□□□□ -2.08
ATG9YDL149W YPL277CQ08989 487 aa2.03□□□□□ -2.08
ATG9YDL149W SPE3Q12074 293 aaKnown RBP2.03□□□□□ -2.08
ATG9YDL149W TY3A-GQ12173 290 aa2.03□□□□□ -2.08
ATG9YDL149W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
ATG9YDL149W TY3A-IQ99219 290 aa2.03□□□□□ -2.08
ATG9YDL149W YML133CQ03099 1374 aa2.03□□□□□ -2.08
ATG9YDL149W YLL067CQ07888 1374 aa2.03□□□□□ -2.08
ATG9YDL149W YLL066CQ99208 1374 aa2.03□□□□□ -2.08
ATG9YDL149W TDH1P00360 332 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms