RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W TAE1P38340 232 aa2.1□□□□□ -2.07
USO1YDL058W YER130CP39959 443 aa2.1□□□□□ -2.07
USO1YDL058W HAT2P39984 401 aa2.1□□□□□ -2.07
USO1YDL058W VID27P40157 782 aa2.1□□□□□ -2.07
USO1YDL058W PCL7P40186 285 aa2.1□□□□□ -2.07
USO1YDL058W SAD1P43589 448 aa2.1□□□□□ -2.07
USO1YDL058W RBL2P48606 106 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W JAC1P53193 184 aa2.1□□□□□ -2.07
USO1YDL058W YNL193WP53870 558 aa2.1□□□□□ -2.07
USO1YDL058W TFC6Q06339 672 aa2.1□□□□□ -2.07
USO1YDL058W NTO1Q12311 748 aa2.1□□□□□ -2.07
USO1YDL058W PRM4Q12498 284 aa2.1□□□□□ -2.07
USO1YDL058W LTE1P07866 1435 aa2.1□□□□□ -2.07
USO1YDL058W PET494P07390 489 aaPredicted RBP2.1□□□□□ -2.07
USO1YDL058W SEC63P14906 663 aa2.1□□□□□ -2.07
USO1YDL058W SRM1P21827 482 aa2.1□□□□□ -2.07
USO1YDL058W SLY1P22213 666 aa2.1□□□□□ -2.07
USO1YDL058W PHO84P25297 587 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W RHB1P25378 209 aa2.1□□□□□ -2.07
USO1YDL058W RPL5P26321 297 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W HEM12P32347 362 aaPredicted RBP2.1□□□□□ -2.07
USO1YDL058W PPG1P32838 368 aa2.1□□□□□ -2.07
USO1YDL058W PET112P33893 541 aa2.1□□□□□ -2.07
USO1YDL058W OCT1P35999 772 aa2.1□□□□□ -2.07
USO1YDL058W CBP4P37267 147 aa2.1□□□□□ -2.07
USO1YDL058W PEX32P38292 413 aa2.1□□□□□ -2.07
USO1YDL058W CRP1P38845 465 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W LAS21P40367 830 aa2.1□□□□□ -2.07
USO1YDL058W KXD1P53158 218 aa2.1□□□□□ -2.07
USO1YDL058W YGR127WP53275 312 aa2.1□□□□□ -2.07
USO1YDL058W OKP1P53298 406 aa2.1□□□□□ -2.07
USO1YDL058W RPA49Q01080 415 aaPredicted RBP2.1□□□□□ -2.07
USO1YDL058W YLR281CQ05863 155 aa2.1□□□□□ -2.07
USO1YDL058W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
USO1YDL058W OPI10Q08202 246 aa2.1□□□□□ -2.07
USO1YDL058W ALE1Q08548 619 aa2.1□□□□□ -2.07
USO1YDL058W YOR389WQ08912 624 aa2.1□□□□□ -2.07
USO1YDL058W YPL199CQ08954 240 aa2.1□□□□□ -2.07
USO1YDL058W YPL216WQ08964 1102 aa2.1□□□□□ -2.07
USO1YDL058W YLR053CQ12026 108 aa2.1□□□□□ -2.07
USO1YDL058W VPS54Q12071 889 aa2.1□□□□□ -2.07
USO1YDL058W PNO1Q99216 274 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W YPR089WO13585 888 aa2.1□□□□□ -2.07
USO1YDL058W WHI2P12611 486 aa2.1□□□□□ -2.07
USO1YDL058W TUP1P16649 713 aa2.1□□□□□ -2.07
USO1YDL058W RAM1P22007 431 aa2.1□□□□□ -2.07
USO1YDL058W ADH7P25377 361 aa2.1□□□□□ -2.07
USO1YDL058W PGM2P37012 569 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W NDE1P40215 560 aa2.1□□□□□ -2.07
USO1YDL058W OPT1P40897 799 aa2.1□□□□□ -2.07
USO1YDL058W AIP1P46680 615 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W NMD5P46970 1048 aa2.1□□□□□ -2.07
USO1YDL058W HAM1P47119 197 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W BPL1P48445 690 aaPredicted RBP2.1□□□□□ -2.07
USO1YDL058W YGR017WP53210 297 aa2.1□□□□□ -2.07
USO1YDL058W ATG4P53867 494 aa2.1□□□□□ -2.07
USO1YDL058W SSL2Q00578 843 aa2.1□□□□□ -2.07
USO1YDL058W UBP2Q01476 1272 aa2.1□□□□□ -2.07
USO1YDL058W CSN9Q03981 162 aa2.1□□□□□ -2.07
USO1YDL058W PLP1Q04004 230 aa2.1□□□□□ -2.07
USO1YDL058W KAR5Q04746 504 aa2.1□□□□□ -2.07
USO1YDL058W YPS7Q06325 596 aa2.1□□□□□ -2.07
USO1YDL058W GPN3Q06543 272 aa2.1□□□□□ -2.07
USO1YDL058W YOR352WQ08816 343 aa2.1□□□□□ -2.07
USO1YDL058W RAD59Q12223 238 aa2.1□□□□□ -2.07
USO1YDL058W RMP1Q12530 201 aa2.1□□□□□ -2.07
USO1YDL058W TY1B-HO13535 1793 aa2.1□□□□□ -2.07
USO1YDL058W TY1B-DR5P0C2I2 1755 aa2.1□□□□□ -2.07
USO1YDL058W TY1B-DR6P0C2I3 1755 aa2.1□□□□□ -2.07
USO1YDL058W TY1B-LR2P0C2I5 1755 aa2.1□□□□□ -2.07
USO1YDL058W TY1B-LR3P0C2I6 1755 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W TY1B-PR1P0C2I9 1755 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W TY1B-PR2P0C2J0 1756 aa2.1□□□□□ -2.07
USO1YDL058W TY1B-PR3P0C2J1 1755 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W TY1B-JR1P47098 1755 aa2.1□□□□□ -2.07
USO1YDL058W TY1B-ML2Q03434 1755 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W TY1B-ER1Q03612 1755 aa2.1□□□□□ -2.07
USO1YDL058W TY1B-ML1Q04711 1755 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W TY1B-GR2Q12269 1755 aa2.1□□□□□ -2.07
USO1YDL058W TY1B-OLQ12273 1755 aa2.1□□□□□ -2.07
USO1YDL058W TY1B-PLQ12414 1755 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W TY1B-AO13527 1196 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W RPL19AP0CX82 189 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W RPL19BP0CX83 189 aaPredicted RBP2.1□□□□□ -2.07
USO1YDL058W FRS1P15624 595 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W YDJ1P25491 409 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W ACP1P32463 125 aa2.1□□□□□ -2.07
USO1YDL058W AFG2P32794 780 aa2.1□□□□□ -2.07
USO1YDL058W YME2P32843 850 aa2.1□□□□□ -2.07
USO1YDL058W MDL1P33310 695 aa2.1□□□□□ -2.07
USO1YDL058W RTT107P38850 1070 aa2.1□□□□□ -2.07
USO1YDL058W MTG2P38860 518 aa2.1□□□□□ -2.07
USO1YDL058W UME6P39001 836 aa2.1□□□□□ -2.07
USO1YDL058W SAW1P39735 261 aa2.1□□□□□ -2.07
USO1YDL058W YIL001WP40560 513 aa2.1□□□□□ -2.07
USO1YDL058W CEP3P40969 608 aa2.1□□□□□ -2.07
USO1YDL058W FAR7P43592 221 aa2.1□□□□□ -2.07
USO1YDL058W NPA3P47122 385 aa2.1□□□□□ -2.07
USO1YDL058W EMC2P47133 292 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W MSN5P52918 1224 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms