RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W SET2P46995 733 aaKnown RBP3.22□□□□□ -1.89
SWD3YBR175W ATP22P50273 684 aaPredicted RBP3.22□□□□□ -1.89
SWD3YBR175W SPT20P50875 604 aa3.22□□□□□ -1.89
SWD3YBR175W MNT2P53059 558 aa3.22□□□□□ -1.89
SWD3YBR175W VPS62P53285 467 aa3.22□□□□□ -1.89
SWD3YBR175W BTN2P53286 410 aa3.22□□□□□ -1.89
SWD3YBR175W ARE2P53629 642 aaKnown RBP3.22□□□□□ -1.89
SWD3YBR175W YPL071CQ02864 156 aa3.22□□□□□ -1.89
SWD3YBR175W YPS7Q06325 596 aa3.22□□□□□ -1.89
SWD3YBR175W ACK1Q07622 623 aaPredicted RBP3.22□□□□□ -1.89
SWD3YBR175W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SWD3YBR175W GPB1Q08886 897 aa3.22□□□□□ -1.89
SWD3YBR175W PGA3Q12746 312 aaKnown RBP3.22□□□□□ -1.89
SWD3YBR175W TAD3Q9URQ3 322 aa3.22□□□□□ -1.89
SWD3YBR175W REV3P14284 1504 aa3.22□□□□□ -1.89
SWD3YBR175W TUB2P02557 457 aaKnown RBP3.21□□□□□ -1.9
SWD3YBR175W CKA1P15790 372 aa3.21□□□□□ -1.9
SWD3YBR175W PDX1P16451 410 aa3.21□□□□□ -1.9
SWD3YBR175W RIT1P23796 513 aa3.21□□□□□ -1.9
SWD3YBR175W CDC20P26309 610 aa3.21□□□□□ -1.9
SWD3YBR175W BRF1P29056 596 aa3.21□□□□□ -1.9
SWD3YBR175W DPH2P32461 534 aa3.21□□□□□ -1.9
SWD3YBR175W CNS1P33313 385 aa3.21□□□□□ -1.9
SWD3YBR175W SAS3P34218 831 aa3.21□□□□□ -1.9
SWD3YBR175W ATG19P35193 415 aa3.21□□□□□ -1.9
SWD3YBR175W APN2P38207 520 aa3.21□□□□□ -1.9
SWD3YBR175W MIP6P38760 659 aaKnown RBP3.21□□□□□ -1.9
SWD3YBR175W NPR2P39923 615 aa3.21□□□□□ -1.9
SWD3YBR175W JEM1P40358 645 aa3.21□□□□□ -1.9
SWD3YBR175W YIL108WP40483 696 aaKnown RBP3.21□□□□□ -1.9
SWD3YBR175W PRM2P40534 656 aa3.21□□□□□ -1.9
SWD3YBR175W YFR016CP43597 1233 aaKnown RBP3.21□□□□□ -1.9
SWD3YBR175W MET12P46151 657 aa3.21□□□□□ -1.9
SWD3YBR175W EXG2P52911 562 aa3.21□□□□□ -1.9
SWD3YBR175W YGR250CP53316 781 aaKnown RBP3.21□□□□□ -1.9
SWD3YBR175W YNR071CP53757 342 aa3.21□□□□□ -1.9
SWD3YBR175W FCP1Q03254 732 aa3.21□□□□□ -1.9
SWD3YBR175W SSL1Q04673 461 aaPredicted RBP3.21□□□□□ -1.9
SWD3YBR175W YDR286CQ05530 114 aa3.21□□□□□ -1.9
SWD3YBR175W STP4Q07351 490 aa3.21□□□□□ -1.9
SWD3YBR175W NOP12Q08208 459 aaKnown RBP3.21□□□□□ -1.9
SWD3YBR175W HMI1Q12039 706 aa3.21□□□□□ -1.9
SWD3YBR175W DIN7Q12086 430 aa3.21□□□□□ -1.9
SWD3YBR175W ECM5Q03214 1411 aa3.2□□□□□ -1.9
SWD3YBR175W ARG3P05150 338 aa3.2□□□□□ -1.9
SWD3YBR175W MET17P06106 444 aa3.2□□□□□ -1.9
SWD3YBR175W ADE3P07245 946 aaKnown RBP3.2□□□□□ -1.9
SWD3YBR175W STE11P23561 717 aa3.2□□□□□ -1.9
SWD3YBR175W ERG3P32353 365 aa3.2□□□□□ -1.9
SWD3YBR175W SAC6P32599 642 aaKnown RBP3.2□□□□□ -1.9
SWD3YBR175W ORC2P32833 620 aa3.2□□□□□ -1.9
SWD3YBR175W SRP101P32916 621 aa3.2□□□□□ -1.9
SWD3YBR175W YKL100CP34248 587 aa3.2□□□□□ -1.9
SWD3YBR175W RXT2P38255 430 aa3.2□□□□□ -1.9
SWD3YBR175W MPT5P39016 859 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
SWD3YBR175W CCT3P39077 534 aaKnown RBP3.2□□□□□ -1.9
SWD3YBR175W ZRG8P40021 1076 aa3.2□□□□□ -1.9
SWD3YBR175W LSM5P40089 93 aaKnown RBP3.2□□□□□ -1.9
SWD3YBR175W ARF3P40994 183 aaRIP-Chip data3.2□□□□□ -1.9 RIP-Chip
SWD3YBR175W GPI8P49018 411 aa3.2□□□□□ -1.9
SWD3YBR175W PSP1P50896 841 aaKnown RBP3.2□□□□□ -1.9
SWD3YBR175W DUO1P53168 247 aaKnown RBP3.2□□□□□ -1.9
SWD3YBR175W YGR012WP53206 393 aa3.2□□□□□ -1.9
SWD3YBR175W BSC5P53755 489 aa3.2□□□□□ -1.9
SWD3YBR175W SSL2Q00578 843 aa3.2□□□□□ -1.9
SWD3YBR175W YMR155WQ03795 547 aa3.2□□□□□ -1.9
SWD3YBR175W TRI1Q05024 226 aa3.2□□□□□ -1.9
SWD3YBR175W CDA1Q06702 301 aa3.2□□□□□ -1.9
SWD3YBR175W ADY3Q07732 790 aa3.2□□□□□ -1.9
SWD3YBR175W AAD4Q07747 329 aa3.2□□□□□ -1.9
SWD3YBR175W SFI1Q12369 946 aa3.2□□□□□ -1.9
SWD3YBR175W PNS1Q12412 539 aa3.2□□□□□ -1.9
SWD3YBR175W GCN4P03069 281 aa3.19□□□□□ -1.9
SWD3YBR175W HIS5P07172 385 aa3.19□□□□□ -1.9
SWD3YBR175W SES1P07284 462 aaKnown RBP3.19□□□□□ -1.9
SWD3YBR175W HSF1P10961 833 aa3.19□□□□□ -1.9
SWD3YBR175W IME1P21190 360 aa3.19□□□□□ -1.9
SWD3YBR175W EMC1P25574 760 aa3.19□□□□□ -1.9
SWD3YBR175W AAD3P25612 363 aa3.19□□□□□ -1.9
SWD3YBR175W FRD1P32614 470 aaKnown RBP3.19□□□□□ -1.9
SWD3YBR175W ESL2P36168 1195 aa3.19□□□□□ -1.9
SWD3YBR175W YHR033WP38690 423 aa3.19□□□□□ -1.9
SWD3YBR175W YEL025CP39991 1188 aa3.19□□□□□ -1.9
SWD3YBR175W MEP1P40260 492 aa3.19□□□□□ -1.9
SWD3YBR175W YJR061WP40355 935 aa3.19□□□□□ -1.9
SWD3YBR175W UBP7P40453 1071 aa3.19□□□□□ -1.9
SWD3YBR175W CHA4P43634 648 aa3.19□□□□□ -1.9
SWD3YBR175W SSY5P47002 699 aa3.19□□□□□ -1.9
SWD3YBR175W MTR3P48240 250 aaPredicted RBP3.19□□□□□ -1.9
SWD3YBR175W PSP2P50109 593 aaKnown RBP3.19□□□□□ -1.9
SWD3YBR175W IMA1P53051 589 aa3.19□□□□□ -1.9
SWD3YBR175W CWC22P53333 577 aaKnown RBP3.19□□□□□ -1.9
SWD3YBR175W ORC4P54791 529 aa3.19□□□□□ -1.9
SWD3YBR175W CTF4Q01454 927 aa3.19□□□□□ -1.9
SWD3YBR175W RPT6Q01939 405 aaKnown RBP3.19□□□□□ -1.9
SWD3YBR175W RCR2Q03446 210 aaKnown RBP3.19□□□□□ -1.9
SWD3YBR175W ASM4Q05166 528 aa3.19□□□□□ -1.9
SWD3YBR175W ISA1Q07821 250 aaPredicted RBP3.19□□□□□ -1.9
SWD3YBR175W TPO1Q07824 586 aa3.19□□□□□ -1.9
SWD3YBR175W RLP24Q07915 199 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms