RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	ALT1	P52893	592 aa		7.42	□□□□□ -1.22
UBP13	YBL067C	PNG1	Q02890	363 aa		7.42	□□□□□ -1.22
UBP13	YBL067C	YUH1	P35127	236 aa		7.42	□□□□□ -1.22
UBP13	YBL067C	SRO77	P38163	1010 aa		7.42	□□□□□ -1.22
UBP13	YBL067C	AIM10	P39965	576 aa	Known RBP	7.42	□□□□□ -1.22
UBP13	YBL067C	PSF2	P40359	213 aa		7.42	□□□□□ -1.22
UBP13	YBL067C	TEL2	P53038	688 aa		7.42	□□□□□ -1.22
UBP13	YBL067C	GPD1	Q00055	391 aa	Known RBP	7.42	□□□□□ -1.22
UBP13	YBL067C	NGL1	Q08213	363 aa	Known RBP	7.42	□□□□□ -1.22
UBP13	YBL067C	ARO3	P14843	370 aa	Known RBP	7.41	□□□□□ -1.22
UBP13	YBL067C	TGL1	P34163	548 aa		7.41	□□□□□ -1.22
UBP13	YBL067C	YSW1	P38280	609 aa		7.41	□□□□□ -1.22
UBP13	YBL067C	NTC20	P38302	140 aa	Predicted RBP	7.41	□□□□□ -1.22
UBP13	YBL067C	NEM1	P38757	446 aa		7.41	□□□□□ -1.22
UBP13	YBL067C	STN1	P38960	494 aa		7.41	□□□□□ -1.22
UBP13	YBL067C	MDR1	P53258	950 aa		7.41	□□□□□ -1.22
UBP13	YBL067C	MTD1	Q02046	320 aa	Known RBP	7.41	□□□□□ -1.22
UBP13	YBL067C	INP2	Q03824	705 aa		7.41	□□□□□ -1.22
UBP13	YBL067C	DIN7	Q12086	430 aa		7.41	□□□□□ -1.22
UBP13	YBL067C	PRB1	P09232	635 aa		7.4	□□□□□ -1.22
UBP13	YBL067C	PDC6	P26263	563 aa	Known RBP	7.4	□□□□□ -1.22
UBP13	YBL067C	EFT1	P32324	842 aa	Known RBP	7.4	□□□□□ -1.22
UBP13	YBL067C	DOA4	P32571	926 aa		7.4	□□□□□ -1.22
UBP13	YBL067C	YTA6	P40328	754 aa		7.4	□□□□□ -1.22
UBP13	YBL067C	SKG3	Q06315	1026 aa		7.4	□□□□□ -1.22
UBP13	YBL067C	RTC5	Q12108	567 aa	Known RBP	7.4	□□□□□ -1.22
UBP13	YBL067C	PRT1	P06103	763 aa	Known RBP	7.4	□□□□□ -1.23
UBP13	YBL067C	HOM2	P13663	365 aa	Known RBP	7.4	□□□□□ -1.23
UBP13	YBL067C	CAD1	P24813	409 aa	Known RBP	7.4	□□□□□ -1.23
UBP13	YBL067C	ERV1	P27882	189 aa		7.4	□□□□□ -1.23
UBP13	YBL067C	CDC12	P32468	407 aa	Known RBP	7.4	□□□□□ -1.23
UBP13	YBL067C	DPH5	P32469	300 aa	Predicted RBP	7.4	□□□□□ -1.23
UBP13	YBL067C	RPT3	P33298	428 aa	Known RBP	7.4	□□□□□ -1.23
UBP13	YBL067C	MAC1	P35192	417 aa		7.4	□□□□□ -1.23
UBP13	YBL067C	YKR051W	P36142	418 aa		7.4	□□□□□ -1.23
UBP13	YBL067C	PNT1	P38969	423 aa		7.4	□□□□□ -1.23
UBP13	YBL067C	SAW1	P39735	261 aa		7.4	□□□□□ -1.23
UBP13	YBL067C	FCP1	Q03254	732 aa		7.4	□□□□□ -1.23
UBP13	YBL067C	ARX1	Q03862	593 aa	Known RBP	7.4	□□□□□ -1.23
UBP13	YBL067C	BUG1	Q12191	341 aa		7.4	□□□□□ -1.23
UBP13	YBL067C	YLL054C	Q12244	843 aa		7.4	□□□□□ -1.23
UBP13	YBL067C	MST1	P07236	462 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	PUT4	P15380	627 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	MRPL40	P36534	297 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	RFC3	P38629	340 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	EOS1	P53938	366 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	REG1	Q00816	1014 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	UTP5	Q04177	643 aa	Known RBP	7.39	□□□□□ -1.23
UBP13	YBL067C	Q0142	Q9ZZW4	58 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	PHO5	P00635	467 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	YCL002C	P25565	263 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	REC104	P33323	182 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	TIF5	P38431	405 aa	Known RBP	7.39	□□□□□ -1.23
UBP13	YBL067C	SPT8	P38915	602 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	SAP4	P53036	818 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	BSC5	P53755	489 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	PDR16	P53860	351 aa	Known RBP	7.39	□□□□□ -1.23
UBP13	YBL067C	ARP4	P80428	489 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	ECM7	Q06200	448 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	CTI6	Q08923	506 aa		7.39	□□□□□ -1.23
UBP13	YBL067C	RPN5	Q12250	445 aa	Known RBP	7.39	□□□□□ -1.23
UBP13	YBL067C	IKI3	Q06706	1349 aa	Known RBP	7.38	□□□□□ -1.23
UBP13	YBL067C	CAR2	P07991	424 aa	Known RBP	7.38	□□□□□ -1.23
UBP13	YBL067C	POL3	P15436	1097 aa		7.38	□□□□□ -1.23
UBP13	YBL067C	HMX1	P32339	317 aa		7.38	□□□□□ -1.23
UBP13	YBL067C	FRD1	P32614	470 aa	Known RBP	7.38	□□□□□ -1.23
UBP13	YBL067C	MRP4	P32902	394 aa		7.38	□□□□□ -1.23
UBP13	YBL067C	YDR089W	P38966	869 aa		7.38	□□□□□ -1.23
UBP13	YBL067C	NPP2	P39997	493 aa		7.38	□□□□□ -1.23
UBP13	YBL067C	VID28	P40547	921 aa		7.38	□□□□□ -1.23
UBP13	YBL067C	AAD14	P42884	376 aa		7.38	□□□□□ -1.23
UBP13	YBL067C	JJJ1	P53863	590 aa		7.38	□□□□□ -1.23
UBP13	YBL067C	YRM1	Q12340	786 aa		7.38	□□□□□ -1.23
UBP13	YBL067C	STE12	P13574	688 aa		7.37	□□□□□ -1.23
UBP13	YBL067C	UBP13	P38187	747 aa		7.37	□□□□□ -1.23
UBP13	YBL067C	PPE1	P38796	400 aa		7.37	□□□□□ -1.23
UBP13	YBL067C	DSL1	P53847	754 aa		7.37	□□□□□ -1.23
UBP13	YBL067C	ADE3	P07245	946 aa	Known RBP	7.37	□□□□□ -1.23
UBP13	YBL067C	PRP22	P24384	1145 aa	Known RBP	7.37	□□□□□ -1.23
UBP13	YBL067C	SPC110	P32380	944 aa		7.37	□□□□□ -1.23
UBP13	YBL067C	SRP101	P32916	621 aa		7.37	□□□□□ -1.23
UBP13	YBL067C	SMF1	P38925	575 aa		7.37	□□□□□ -1.23
UBP13	YBL067C	YIR014W	P40570	242 aa		7.37	□□□□□ -1.23
UBP13	YBL067C	SLS1	P42900	643 aa		7.37	□□□□□ -1.23
UBP13	YBL067C	CUL3	P53202	744 aa		7.37	□□□□□ -1.23
UBP13	YBL067C	RPT6	Q01939	405 aa	Known RBP	7.37	□□□□□ -1.23
UBP13	YBL067C	YCK1	P23291	538 aa		7.36	□□□□□ -1.23
UBP13	YBL067C	MKS1	P34072	584 aa		7.36	□□□□□ -1.23
UBP13	YBL067C	LOC1	P43586	204 aa	Predicted RBP	7.36	□□□□□ -1.23
UBP13	YBL067C	NCS6	P53088	359 aa		7.36	□□□□□ -1.23
UBP13	YBL067C	ENT4	Q07872	247 aa		7.36	□□□□□ -1.23
UBP13	YBL067C	VPS54	Q12071	889 aa		7.36	□□□□□ -1.23
UBP13	YBL067C	GNT1	Q12096	491 aa		7.36	□□□□□ -1.23
UBP13	YBL067C	NMD4	Q12129	218 aa		7.36	□□□□□ -1.23
UBP13	YBL067C	GLO4	Q12320	285 aa		7.36	□□□□□ -1.23
UBP13	YBL067C	YPR015C	Q12531	247 aa		7.36	□□□□□ -1.23
UBP13	YBL067C	VAS1	P07806	1104 aa	Known RBP	7.36	□□□□□ -1.23
UBP13	YBL067C	CLC1	P17891	233 aa		7.36	□□□□□ -1.23
UBP13	YBL067C	SIR1	P21691	654 aa		7.36	□□□□□ -1.23
UBP13	YBL067C	GRR1	P24814	1151 aa		7.36	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms