RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C YPR097WQ06839 1073 aa1.94□□□□□ -2.1
PEP1YBL017C GAL10P04397 699 aa1.94□□□□□ -2.1
PEP1YBL017C HOM2P13663 365 aaKnown RBP1.94□□□□□ -2.1
PEP1YBL017C PHO11P35842 467 aa1.94□□□□□ -2.1
PEP1YBL017C SPC42P36094 363 aa1.94□□□□□ -2.1
PEP1YBL017C PHO12P38693 467 aa1.94□□□□□ -2.1
PEP1YBL017C NUP60P39705 539 aa1.94□□□□□ -2.1
PEP1YBL017C BOP3P53958 396 aa1.94□□□□□ -2.1
PEP1YBL017C HRD3Q05787 833 aa1.94□□□□□ -2.1
PEP1YBL017C SPO75Q07798 868 aa1.94□□□□□ -2.1
PEP1YBL017C TRS33Q99394 268 aa1.94□□□□□ -2.1
PEP1YBL017C SLM5P25345 492 aaKnown RBP1.94□□□□□ -2.1
PEP1YBL017C KAR9P32526 644 aa1.94□□□□□ -2.1
PEP1YBL017C YKL091CP33324 310 aaKnown RBP1.94□□□□□ -2.1
PEP1YBL017C HEL1P36113 551 aa1.94□□□□□ -2.1
PEP1YBL017C YSW1P38280 609 aa1.94□□□□□ -2.1
PEP1YBL017C EXO5P38289 585 aa1.94□□□□□ -2.1
PEP1YBL017C TFG2P41896 400 aaPredicted RBP1.94□□□□□ -2.1
PEP1YBL017C SAD1P43589 448 aa1.94□□□□□ -2.1
PEP1YBL017C UTP8P53276 713 aaKnown RBP1.94□□□□□ -2.1
PEP1YBL017C ATF2P53296 535 aa1.94□□□□□ -2.1
PEP1YBL017C YNL115CP53925 644 aa1.94□□□□□ -2.1
PEP1YBL017C MTG1Q03151 367 aaPredicted RBP1.94□□□□□ -2.1
PEP1YBL017C NDD1Q08887 554 aa1.94□□□□□ -2.1
PEP1YBL017C PIN2Q12057 282 aa1.94□□□□□ -2.1
PEP1YBL017C NBP2Q12163 236 aa1.94□□□□□ -2.1
PEP1YBL017C YLR149CQ99296 730 aa1.94□□□□□ -2.1
PEP1YBL017C IZH4Q99393 312 aa1.94□□□□□ -2.1
PEP1YBL017C ATP4P05626 244 aa1.93□□□□□ -2.1
PEP1YBL017C SPE1P08432 466 aa1.93□□□□□ -2.1
PEP1YBL017C RED1P14291 827 aa1.93□□□□□ -2.1
PEP1YBL017C UBS1P38290 277 aa1.93□□□□□ -2.1
PEP1YBL017C RGD1P38339 666 aa1.93□□□□□ -2.1
PEP1YBL017C APM2P38700 605 aa1.93□□□□□ -2.1
PEP1YBL017C UME6P39001 836 aa1.93□□□□□ -2.1
PEP1YBL017C PSY2P40164 858 aa1.93□□□□□ -2.1
PEP1YBL017C OSW5P40219 148 aa1.93□□□□□ -2.1
PEP1YBL017C IST3P40565 148 aaPredicted RBP1.93□□□□□ -2.1
PEP1YBL017C REF2P42073 533 aaPredicted RBP1.93□□□□□ -2.1
PEP1YBL017C NAS6P50086 228 aa1.93□□□□□ -2.1
PEP1YBL017C UBP3Q01477 912 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
PEP1YBL017C TOF2Q02208 771 aa1.93□□□□□ -2.1
PEP1YBL017C NOC3Q07896 663 aaPredicted RBP1.93□□□□□ -2.1
PEP1YBL017C SAM4Q08985 325 aaKnown RBP1.93□□□□□ -2.1
PEP1YBL017C PER33Q12144 273 aa1.93□□□□□ -2.1
PEP1YBL017C SIA1Q12212 622 aa1.93□□□□□ -2.1
PEP1YBL017C NDJ1Q12366 352 aa1.93□□□□□ -2.1
PEP1YBL017C CKI1P20485 582 aa1.93□□□□□ -2.1
PEP1YBL017C GND1P38720 489 aaKnown RBP1.93□□□□□ -2.1
PEP1YBL017C PFS1P38872 237 aa1.93□□□□□ -2.1
PEP1YBL017C SAK1P38990 1142 aa1.93□□□□□ -2.1
PEP1YBL017C SEO1P39709 593 aa1.93□□□□□ -2.1
PEP1YBL017C YER130CP39959 443 aa1.93□□□□□ -2.1
PEP1YBL017C DJP1P40564 432 aa1.93□□□□□ -2.1
PEP1YBL017C LCL3P53153 274 aa1.93□□□□□ -2.1
PEP1YBL017C JJJ1P53863 590 aa1.93□□□□□ -2.1
PEP1YBL017C TDA9Q04545 1251 aa1.93□□□□□ -2.1
PEP1YBL017C CMS1Q07897 291 aaKnown RBP1.93□□□□□ -2.1
PEP1YBL017C RCL1Q08096 367 aaPredicted RBP1.93□□□□□ -2.1
PEP1YBL017C NBL1Q3E7Y6 73 aa1.93□□□□□ -2.1
PEP1YBL017C MEX67Q99257 599 aaKnown RBP1.93□□□□□ -2.1
PEP1YBL017C CET1O13297 549 aaPredicted RBP1.93□□□□□ -2.1
PEP1YBL017C PPZ1P26570 692 aa1.93□□□□□ -2.1
PEP1YBL017C GCD6P32501 712 aaKnown RBP1.93□□□□□ -2.1
PEP1YBL017C SSE1P32589 693 aaKnown RBP1.93□□□□□ -2.1
PEP1YBL017C TOM20P35180 183 aa1.93□□□□□ -2.1
PEP1YBL017C DCW1P36091 449 aa1.93□□□□□ -2.1
PEP1YBL017C FSH1P38777 243 aaKnown RBP1.93□□□□□ -2.1
PEP1YBL017C UBA4P38820 440 aa1.93□□□□□ -2.1
PEP1YBL017C SET5P38890 526 aaKnown RBP1.93□□□□□ -2.1
PEP1YBL017C SWD1P39706 426 aa1.93□□□□□ -2.1
PEP1YBL017C GEM1P39722 662 aa1.93□□□□□ -2.1
PEP1YBL017C EMP65P40085 556 aa1.93□□□□□ -2.1
PEP1YBL017C RSM25P40496 264 aa1.93□□□□□ -2.1
PEP1YBL017C AIM23P47015 356 aa1.93□□□□□ -2.1
PEP1YBL017C PRP31P49704 494 aaPredicted RBP1.93□□□□□ -2.1
PEP1YBL017C TAN1P53072 289 aaPredicted RBP1.93□□□□□ -2.1
PEP1YBL017C RHO3Q00245 231 aaKnown RBP1.93□□□□□ -2.1
PEP1YBL017C CDD1Q06549 142 aa1.93□□□□□ -2.1
PEP1YBL017C TFC8Q12308 588 aa1.93□□□□□ -2.1
PEP1YBL017C GTT2Q12390 233 aa1.93□□□□□ -2.1
PEP1YBL017C LPX1Q12405 387 aaKnown RBP1.93□□□□□ -2.1
PEP1YBL017C AI5_ALPHAQ9ZZX1 630 aa1.93□□□□□ -2.1
PEP1YBL017C RAP1P11938 827 aa1.93□□□□□ -2.1
PEP1YBL017C COQ8P27697 501 aa1.93□□□□□ -2.1
PEP1YBL017C CIN8P27895 1000 aa1.93□□□□□ -2.1
PEP1YBL017C GAC1P28006 793 aa1.93□□□□□ -2.1
PEP1YBL017C RAD5P32849 1169 aaPredicted RBP1.93□□□□□ -2.1
PEP1YBL017C DID4P36108 232 aa1.93□□□□□ -2.1
PEP1YBL017C YBL036CP38197 257 aa1.93□□□□□ -2.1
PEP1YBL017C IML3P38265 245 aa1.93□□□□□ -2.1
PEP1YBL017C MCX1P38323 520 aaPredicted RBP1.93□□□□□ -2.1
PEP1YBL017C TCD1P38756 429 aa1.93□□□□□ -2.1
PEP1YBL017C PET100P38958 111 aa1.93□□□□□ -2.1
PEP1YBL017C YIL161WP40449 235 aaKnown RBP1.93□□□□□ -2.1
PEP1YBL017C ALT2P52892 507 aa1.93□□□□□ -2.1
PEP1YBL017C YGR111WP53265 400 aa1.93□□□□□ -2.1
PEP1YBL017C YGR250CP53316 781 aaKnown RBP1.93□□□□□ -2.1
PEP1YBL017C YSH1Q06224 779 aaPredicted RBP1.93□□□□□ -2.1
PEP1YBL017C GAL4P04386 881 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 110.5 ms