RNA–Protein interactions for RNA: ENST00000368632.6

HDAC2-201, Transcript of histone deacetylase 2, humanhuman

TSL 2 BASIC

Gene HDAC2, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-201ENST00000368632 ECM29Q5VYK3 1845 aa23.34■■□□□ 1.33
HDAC2-201ENST00000368632 MARCKSP29966 332 aaPredicted RBP23.33■■□□□ 1.33
HDAC2-201ENST00000368632 KRT40Q6A162 431 aa23.33■■□□□ 1.33
HDAC2-201ENST00000368632 APOA5Q6Q788 366 aa23.33■■□□□ 1.33
HDAC2-201ENST00000368632 CCDC150Q8NCX0 1101 aa23.33■■□□□ 1.33
HDAC2-201ENST00000368632 NKX2-3Q8TAU0 364 aa23.33■■□□□ 1.33
HDAC2-201ENST00000368632 PKNOX2Q96KN3 472 aa23.33■■□□□ 1.33
HDAC2-201ENST00000368632 TIGD1Q96MW7 591 aa23.33■■□□□ 1.33
HDAC2-201ENST00000368632 TBC1D2BQ9UPU7 963 aa23.33■■□□□ 1.33
HDAC2-201ENST00000368632 MYO5AQ9Y4I1 1855 aaKnown RBP23.33■■□□□ 1.32
HDAC2-201ENST00000368632 B4E1Z4 1266 aa23.32■■□□□ 1.32
HDAC2-201ENST00000368632 IRS4O14654 1257 aaPredicted RBP23.32■■□□□ 1.32
HDAC2-201ENST00000368632 RXRAP19793 462 aa23.32■■□□□ 1.32
HDAC2-201ENST00000368632 GNL2Q13823 731 aaKnown RBP23.32■■□□□ 1.32
HDAC2-201ENST00000368632 TMEM87BQ96K49 555 aa23.32■■□□□ 1.32
HDAC2-201ENST00000368632 PRDM10Q9NQV6 1147 aa23.32■■□□□ 1.32
HDAC2-201ENST00000368632 TRMT1Q9NXH9 659 aaKnown RBP23.32■■□□□ 1.32
HDAC2-201ENST00000368632 PPP6R2O75170 966 aa23.32■■□□□ 1.32
HDAC2-201ENST00000368632 PDE8BO95263 885 aa23.32■■□□□ 1.32
HDAC2-201ENST00000368632 PDE6AP16499 860 aa23.32■■□□□ 1.32
HDAC2-201ENST00000368632 U2AF2P26368 475 aaKnown RBP eCLIP23.32■■□□□ 1.323e-8■■□□□ 12.8
HDAC2-201ENST00000368632 TMC6Q7Z403 805 aa23.32■■□□□ 1.32
HDAC2-201ENST00000368632 JMYQ8N9B5 988 aa23.32■■□□□ 1.32
HDAC2-201ENST00000368632 LRP6O75581 1613 aa23.32■■□□□ 1.32
HDAC2-201ENST00000368632 UQCRFS1P1P0C7P4 283 aa23.31■■□□□ 1.32
HDAC2-201ENST00000368632 ARID4AP29374 1257 aaPredicted RBP23.31■■□□□ 1.32
HDAC2-201ENST00000368632 CDC27P30260 824 aa23.31■■□□□ 1.32
HDAC2-201ENST00000368632 SYKP43405 635 aa23.31■■□□□ 1.32
HDAC2-201ENST00000368632 CCDC102BQ68D86 513 aa23.31■■□□□ 1.32
HDAC2-201ENST00000368632 MICU3Q86XE3 530 aa23.31■■□□□ 1.32
HDAC2-201ENST00000368632 ZBTB43O43298 467 aa23.31■■□□□ 1.32
HDAC2-201ENST00000368632 PHKA1P46020 1223 aa23.31■■□□□ 1.32
HDAC2-201ENST00000368632 NCAPHQ15003 741 aa23.31■■□□□ 1.32
HDAC2-201ENST00000368632 PHKBQ93100 1093 aa23.31■■□□□ 1.32
HDAC2-201ENST00000368632 WWC3Q9ULE0 1092 aa23.31■■□□□ 1.32
HDAC2-201ENST00000368632 DHX8Q14562 1220 aaKnown RBP23.3■■□□□ 1.32
HDAC2-201ENST00000368632 NFXL1Q6ZNB6 911 aa23.3■■□□□ 1.32
HDAC2-201ENST00000368632 SENP2Q9HC62 589 aa23.3■■□□□ 1.32
HDAC2-201ENST00000368632 CGNQ9P2M7 1197 aaKnown RBP23.3■■□□□ 1.32
HDAC2-201ENST00000368632 TRMT112Q9UI30 125 aaKnown RBP23.3■■□□□ 1.32
HDAC2-201ENST00000368632 HPSEQ9Y251 543 aa23.3■■□□□ 1.32
HDAC2-201ENST00000368632 TCRBV5S4A2TA0A5A2 114 aa23.29■■□□□ 1.32
HDAC2-201ENST00000368632 KIF2AO00139 706 aaPredicted RBP23.29■■□□□ 1.32
HDAC2-201ENST00000368632 IKBKBO14920 756 aa23.29■■□□□ 1.32
HDAC2-201ENST00000368632 TRIM29Q14134 588 aa23.29■■□□□ 1.32
HDAC2-201ENST00000368632 AIDAQ96BJ3 306 aa23.29■■□□□ 1.32
HDAC2-201ENST00000368632 ITGB4P16144 1822 aa23.29■■□□□ 1.32
HDAC2-201ENST00000368632 SPDYE4A6NLX3 237 aa23.29■■□□□ 1.32
HDAC2-201ENST00000368632 GOLGA8AA7E2F4 631 aa23.29■■□□□ 1.32
HDAC2-201ENST00000368632 IARSP41252 1262 aaKnown RBP23.29■■□□□ 1.32
HDAC2-201ENST00000368632 PTPAQ15257 358 aa23.29■■□□□ 1.32
HDAC2-201ENST00000368632 IGDCC4Q8TDY8 1250 aa23.29■■□□□ 1.32
HDAC2-201ENST00000368632 TAOK2Q9UL54 1235 aa23.29■■□□□ 1.32
HDAC2-201ENST00000368632 ARAP2Q8WZ64 1704 aa23.29■■□□□ 1.32
HDAC2-201ENST00000368632 PDE8AO60658 829 aa23.28■■□□□ 1.32
HDAC2-201ENST00000368632 NAA30Q147X3 362 aaPredicted RBP23.28■■□□□ 1.32
HDAC2-201ENST00000368632 TMEM67Q5HYA8 995 aa23.28■■□□□ 1.32
HDAC2-201ENST00000368632 ARMCX5Q6P1M9 558 aa23.28■■□□□ 1.32
HDAC2-201ENST00000368632 SHC4Q6S5L8 630 aa23.28■■□□□ 1.32
HDAC2-201ENST00000368632 STRBPQ96SI9 672 aaKnown RBP23.28■■□□□ 1.32
HDAC2-201ENST00000368632 FEZ1Q99689 392 aa23.28■■□□□ 1.32
HDAC2-201ENST00000368632 LY9Q9HBG7 655 aa23.28■■□□□ 1.32
HDAC2-201ENST00000368632 TUBE1Q9UJT0 475 aa23.28■■□□□ 1.32
HDAC2-201ENST00000368632 SFPQP23246 707 aaKnown RBP eCLIP23.28■■□□□ 1.32
HDAC2-201ENST00000368632 NTRK3Q16288 839 aa23.28■■□□□ 1.32
HDAC2-201ENST00000368632 SGMS1Q86VZ5 419 aa23.28■■□□□ 1.32
HDAC2-201ENST00000368632 KIF18AQ8NI77 898 aa23.28■■□□□ 1.32
HDAC2-201ENST00000368632 MAP3K14Q99558 947 aa23.28■■□□□ 1.32
HDAC2-201ENST00000368632 LRP5O75197 1615 aa23.27■■□□□ 1.32
HDAC2-201ENST00000368632 PUM3Q15397 648 aaKnown RBP23.27■■□□□ 1.32
HDAC2-201ENST00000368632 ALX1Q15699 326 aa23.27■■□□□ 1.32
HDAC2-201ENST00000368632 ISM2Q6H9L7 571 aa23.27■■□□□ 1.32
HDAC2-201ENST00000368632 FAM237AA0A1B0GTK4 181 aa23.26■■□□□ 1.31
HDAC2-201ENST00000368632 NRDCO43847 1150 aa23.26■■□□□ 1.31
HDAC2-201ENST00000368632 RANBP6O60518 1105 aaKnown RBP23.26■■□□□ 1.31
HDAC2-201ENST00000368632 LMOD1P29536 600 aaPredicted RBP23.26■■□□□ 1.31
HDAC2-201ENST00000368632 FANCCQ00597 558 aa23.26■■□□□ 1.31
HDAC2-201ENST00000368632 RESP18Q5W5W9 173 aa23.26■■□□□ 1.31
HDAC2-201ENST00000368632 LPIN2Q92539 896 aa23.26■■□□□ 1.31
HDAC2-201ENST00000368632 CYP19A1P11511 503 aaPredicted RBP23.26■■□□□ 1.31
HDAC2-201ENST00000368632 MYL10Q9BUA6 226 aa23.26■■□□□ 1.31
HDAC2-201ENST00000368632 UBN2Q6ZU65 1347 aa23.25■■□□□ 1.31
HDAC2-201ENST00000368632 STK36Q9NRP7 1315 aa23.25■■□□□ 1.31
HDAC2-201ENST00000368632 NUP98P52948 1817 aa23.25■■□□□ 1.31
HDAC2-201ENST00000368632 KCNJ6P48051 423 aa23.25■■□□□ 1.31
HDAC2-201ENST00000368632 E4F1Q66K89 784 aaPredicted RBP23.25■■□□□ 1.31
HDAC2-201ENST00000368632 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.25■■□□□ 1.31
HDAC2-201ENST00000368632 FAM217BQ9NTX9 383 aaPredicted RBP23.25■■□□□ 1.31
HDAC2-201ENST00000368632 SLAIN2Q9P270 581 aa23.25■■□□□ 1.31
HDAC2-201ENST00000368632 MROH5Q6ZUA9 1318 aa23.25■■□□□ 1.31
HDAC2-201ENST00000368632 CHD4Q14839 1912 aa23.25■■□□□ 1.31
HDAC2-201ENST00000368632 PATL2C9JE40 543 aaKnown RBP23.24■■□□□ 1.31
HDAC2-201ENST00000368632 CUTAO60888 179 aa23.24■■□□□ 1.31
HDAC2-201ENST00000368632 ZSCAN20P17040 1043 aaPredicted RBP23.24■■□□□ 1.31
HDAC2-201ENST00000368632 LIFRP42702 1097 aa23.24■■□□□ 1.31
HDAC2-201ENST00000368632 NAPBQ9H115 298 aa23.24■■□□□ 1.31
HDAC2-201ENST00000368632 PRDM4Q9UKN5 801 aa23.24■■□□□ 1.31
HDAC2-201ENST00000368632 ZNF215Q9UL58 517 aaPredicted RBP23.24■■□□□ 1.31
HDAC2-201ENST00000368632 ZBTB1Q9Y2K1 713 aa23.24■■□□□ 1.31
HDAC2-201ENST00000368632 SLC12A7Q9Y666 1083 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms