RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Dbr1Q923B1 550 aa19.45■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Tmod2Q9JKK7 351 aa19.45■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Plxnb2B2RXS4 1842 aa19.45■□□□□ 0.7
Tpm1-215ENSMUST00000113705 L1camP11627 1260 aa19.44■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Irx3P81067 507 aa19.44■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Adck5Q80V03 582 aa19.44■□□□□ 0.7
Tpm1-215ENSMUST00000113705 S1pr4Q9Z0L1 386 aa19.44■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Brd1E9PZ26 1189 aaKnown RBP19.44■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Ppp4cP97470 307 aa19.44■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Bcs1lQ9CZP5 418 aa19.44■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Prss40A6H6T1 365 aa19.43■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Ces1aE9PYP1 563 aa19.43■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Pnmal2G3X9N3 661 aa19.43■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Slc27a3O88561 667 aa19.43■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Cyp2d9P11714 504 aa19.43■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Klhdc9Q3USL1 350 aa19.43■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Mum1l1Q4VA55 681 aa19.43■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Zbed3Q9D0L1 228 aa19.43■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Plekhg2Q6KAU7 1340 aa19.43■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Calr4Q3TQS0 420 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Tbc1d9bQ5SVR0 1263 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Ppm1gQ61074 542 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Phf20Q8BLG0 1010 aaKnown RBP19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Cetn4Q8K4K1 168 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Pla2g12bQ99P27 195 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Pold4Q9CWP8 107 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 EhhadhQ9DBM2 718 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Cry2Q9R194 592 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Mcm2P97310 904 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Pnpla6Q3TRM4 1355 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Secisbp2lQ6A098 1086 aaKnown RBP19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Pramel6Q810Y9 485 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Slc4a7Q8BTY2 1034 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Lmbrd2Q8C561 694 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Atl3Q91YH5 541 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Tbc1d7Q9D0K0 293 aa19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Rai14Q9EP71 979 aaKnown RBP19.42■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Cyp2d10P24456 504 aa19.41■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Pou3f3P31361 497 aa19.41■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Eef2P58252 858 aaKnown RBP19.41■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Traf5P70191 558 aa19.41■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Rpusd2Q149F1 553 aa19.41■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Slain1Q68FF7 579 aa19.41■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Mei1Q9D4I2 1268 aa19.41■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Zkscan2G3X952 960 aa19.4■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Senp5Q6NXL6 749 aa19.4■□□□□ 0.7
Tpm1-215ENSMUST00000113705 PaoxQ8C0L6 504 aa19.4■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Tnnt3Q9QZ47 272 aa19.4■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Col11a1Q61245 1804 aa19.4■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Usp17ldG5E8G2 545 aa19.39■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Usp17lcG5E8I7 545 aa19.39■□□□□ 0.7
Tpm1-215ENSMUST00000113705 CrcpO35427 148 aa19.39■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Ddx49Q4FZF3 480 aaKnown RBP19.39■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Foxn1Q61575 648 aa19.39■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Ccdc148Q6P5U8 527 aa19.39■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Ireb2Q811J3 963 aaKnown RBP19.39■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Trmt2aQ8BNV1 574 aaKnown RBP19.39■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Sulf1Q8K007 870 aa19.39■□□□□ 0.7
Tpm1-215ENSMUST00000113705 Appbp2Q9DAX9 585 aa19.39■□□□□ 0.7
Tpm1-215ENSMUST00000113705 DnttP09838 530 aa19.39■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Gprin1Q3UNH4 932 aa19.39■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Frmd7A2AD83 703 aa19.38■□□□□ 0.69
Tpm1-215ENSMUST00000113705 LtbrP50284 415 aa19.38■□□□□ 0.69
Tpm1-215ENSMUST00000113705 GnptabQ69ZN6 1235 aa19.38■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Trim56Q80VI1 734 aaKnown RBP19.38■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Pxylp1Q8BHA9 480 aa19.38■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Kcnq3Q8K3F6 873 aa19.38■□□□□ 0.69
Tpm1-215ENSMUST00000113705 AfdnQ9QZQ1 1820 aaKnown RBP19.38■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Aox3G3X982 1335 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Prpmp5E9PXN1 296 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Pagr1bF6V0H0 108 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Slc4a4O88343 1079 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Mmp20P57748 482 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Gas1Q01721 343 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Tbc1d9Q3UYK3 1264 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Prune1Q8BIW1 454 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 C8aQ8K182 587 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 RestQ8VIG1 1082 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Pagr1aQ99L02 253 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Ccdc39Q9D5Y1 937 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Cacna1fQ9JIS7 1985 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Atrnl1Q6A051 1378 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Ythdc1E9Q5K9 736 aaKnown RBP19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Bnip3O55003 187 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Fam196bQ6GQV1 535 aa19.37■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Mdm2P23804 489 aa19.36■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Vcam1P29533 739 aa19.36■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Bace1P56818 501 aa19.36■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Ddx55Q6ZPL9 600 aaKnown RBP19.36■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Tmc4Q7TQ65 694 aa19.36■□□□□ 0.69
Tpm1-215ENSMUST00000113705 KhnynQ80U38 671 aa19.36■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Cnksr2Q80YA9 1032 aa19.36■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Myh2G3UW82 1942 aa19.35■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Pcdhb9E9Q5G2 828 aa19.35■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Serpinb2P12388 415 aa19.35■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Tfcp2l1Q3UNW5 479 aa19.35■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Spata21Q8BHW6 681 aa19.35■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Smc5Q8CG46 1101 aaKnown RBP19.35■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Kif18aQ91WD7 886 aa19.35■□□□□ 0.69
Tpm1-215ENSMUST00000113705 Add2Q9QYB8 725 aa19.35■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms