RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Wdr70Q3TWF6 657 aa7.94□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Mroh6V9GX81 722 aa7.94□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Ktn1Q61595 1327 aaKnown RBP7.94□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Atp8b3Q6UQ17 1335 aa7.94□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Chd2E9PZM4 1827 aaKnown RBP7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Erbb4Q61527 1308 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Kansl3A2RSY1 903 aaKnown RBP7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Gm20425E9Q035 978 aaKnown RBP7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Gm4340L7N2C4 268 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 SrprbP47758 269 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Abcd1P48410 736 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Spg7Q3ULF4 781 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Islr2Q5RKR3 745 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Ctdspl2Q8BG15 465 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 HmcesQ8R1M0 353 aaKnown RBP7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Ccdc43Q9CR29 222 aaKnown RBP7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Sorbs3Q9R1Z8 733 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Clip2Q9Z0H8 1047 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Zc3h13E9Q784 1729 aaKnown RBP7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Cyp2j7A0A140T8U1 504 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 A0A1Y7VML8 143 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 TrdnE9Q9K5 693 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 MycnP03966 462 aaKnown RBP7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Pde11aP0C1Q2 933 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Large2Q5XPT3 690 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Sept9Q80UG5 583 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Arid5bQ8BM75 1188 aaKnown RBP7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Usp44Q8C2S0 711 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Amigo3Q8C2S7 508 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Pdlim2Q8R1G6 349 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Ccdc96Q9CR92 584 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Dydc2Q9D3X8 139 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Lmbr1Q9JIT0 490 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Phlpp1Q8CHE4 1687 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Ppfibp2O35711 882 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Zkscan4Q5SZT6 480 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Anp32cQ64G17 123 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Rbm15bQ6PHZ5 887 aaKnown RBP7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Cyp4f39Q8BGU0 532 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Tmco3Q8BH01 678 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Klhl30Q8C3F7 581 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Krt23Q99PS0 422 aa7.93□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Nap1l1P28656 391 aaKnown RBP7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Frat1P70339 274 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Cep131Q62036 1060 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Necab1Q8BG18 352 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Stn1Q8K2X3 378 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Gja10Q9WUS4 505 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Znf541Q0GGX2 1363 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Sos2Q02384 1333 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Calcoco2A2A6M5 331 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Ampd3O08739 766 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Sept1P42209 366 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Pfkfb1P70266 471 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Nucb2P81117 420 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Ccdc102aQ3TMW1 549 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Znf697Q569E7 569 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Sass6Q80UK7 654 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Ano2Q8CFW1 1002 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Plcd3Q8K2J0 785 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Vps18Q8R307 973 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Hps4Q99KG7 671 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Arpp21Q9DCB4 807 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Kcnh3Q9WVJ0 1095 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Med1Q925J9 1575 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Tbc1d4Q8BYJ6 1307 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Kif20bQ80WE4 1774 aaKnown RBP7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Slit3Q9WVB4 1523 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 MpndQ3TV65 487 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Oxr1Q4KMM3 866 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 L1td1Q587J6 782 aaKnown RBP7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Tpm4Q6IRU2 248 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 HelbQ6NVF4 1074 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Ciao1Q99KN2 339 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Ipo7Q9EPL8 1038 aaKnown RBP7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 FliiQ9JJ28 1271 aa7.92□□□□□ -1.14
Col6a6-201ENSMUST00000060896 PplQ9R269 1755 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Api5O35841 504 aaKnown RBP7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 MarcksP26645 309 aaKnown RBP7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Ccdc174Q3U155 467 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Gm28047Q3US59 414 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Znf496Q5SXI5 585 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 RragbQ6NTA4 374 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Mylk2Q8VCR8 613 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 ParnQ8VDG3 624 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Ehd4Q9EQP2 541 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Osbpl5Q9ER64 874 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 A0A1W2P7S8 802 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Tuft1O08970 390 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Pde6aP27664 859 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Atp6v1aP50516 617 aaKnown RBP7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Map3k12Q60700 888 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Cnga2Q62398 664 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Arid3aQ62431 601 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Cdc5lQ6A068 802 aaKnown RBP7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Mxd3Q80US8 206 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Map10Q8BJS7 891 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Uba5Q8VE47 403 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Wdr64Q9D565 1086 aa7.91□□□□□ -1.14
Col6a6-201ENSMUST00000060896 Ube3bQ9ES34 1070 aa7.91□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 84.3 ms