RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Ube2j1Q9JJZ4 318 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Trav15-2-dv6-2A0A075B650 123 aa17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Ighv1-36A0A0A6YXT2 117 aa17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Gm45692D3Z0A0 150 aa17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Pet117P0DJF2 80 aa17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Nkx2-1P50220 372 aa17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Rif1Q6PR54 2419 aaKnown RBP17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr1137Q7TR40 310 aa17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Poc1bQ8BHD1 476 aa17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Psg16Q8K0U8 395 aa17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Nup35Q8R4R6 325 aa17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Pbp2Q8VIN1 187 aa17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Parm1Q923D3 296 aa17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Eaf1Q9D4C5 268 aa17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr632Q9EPN9 317 aa17.34■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Gm28285A0A087WQ54 102 aa17.33■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Gm28778A0A087WSK7 233 aa17.33■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Gm29106A0A087WSP8 697 aa17.33■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Ighv3-4A0A0A6YXF1 117 aa17.33■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Gm3486L7N2D0 199 aa17.33■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Tnfsf8P32972 239 aa17.33■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Q08AU9 97 aa17.33■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Tex261Q62302 196 aa17.33■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 MpiQ924M7 423 aa17.33■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Cbln3Q9JHG0 197 aa17.33■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Dolpp1Q9JMF7 238 aa17.33■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Akap6E9Q9K8 2307 aa17.33■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr920E9Q413 310 aa17.33■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Gnb2P62880 340 aa17.33■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Hist1h2baP70696 127 aa17.33■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Pate4Q09098 99 aa17.33■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Ube2d2bQ6ZWY6 147 aa17.33■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Actl6bQ99MR0 426 aa17.33■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 FaimQ9WUD8 179 aa17.33■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Wisp2Q9Z0G4 251 aa17.33■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Gm44596A0A0N4SVA0 210 aa17.32■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Fabp9O08716 132 aa17.32■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 P04943 107 aa17.32■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Rpl27aP14115 148 aaKnown RBP17.32■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Tmem71Q149F5 287 aa17.32■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 A3galt2Q3V1N9 370 aa17.32■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Olfr1509Q7TQQ0 308 aa17.32■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Olfr1457Q8VFK3 317 aa17.32■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Nek7Q9ES74 302 aa17.32■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Ap4m1Q9JKC7 449 aa17.32■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Olfr685A0A1L1SVG7 331 aa17.31■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Cdc20bD3Z3I0 519 aa17.31■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Pitx3O35160 302 aa17.31■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Siva1O54926 175 aa17.31■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Pdlim4P70271 330 aa17.31■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 ClcP97400 68 aa17.31■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Aqp6Q8C4A0 293 aa17.31■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 TskuQ8CBR6 354 aa17.31■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Slc35e1Q8CD26 409 aa17.31■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Celsr2Q9R0M0 2920 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Ighv1-81A0A075B5Y4 117 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 H60bB1B212 251 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Gm10666K7N6B8 321 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Vmn1r114L7N226 321 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Vmn1r126L7N2C8 321 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Hbb-yP02104 147 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 P18529 117 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Zfp386Q1WWJ5 626 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Gm20816Q5FWD4 227 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Olfr139Q60891 315 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Lpar6Q8BMC0 344 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Tex13bQ99MW5 186 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Fbxo36Q9CQ24 188 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Gar1Q9CY66 231 aaKnown RBP17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Ssbp3Q9D032 388 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Myo18bE9PV66 2605 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Gm2026A2ART4 498 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 SncaO55042 140 aaKnown RBP17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Polr2gP62488 172 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Tff1Q08423 87 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Commd3Q63829 195 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Ccdc36Q6PDM4 574 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Gpr137Q80ZU9 396 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Txnl1Q8CDN6 289 aaKnown RBP17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Tmem33Q9CR67 247 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Mrps15Q9DC71 258 aaKnown RBP17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Hey1Q9WV93 299 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 LenepQ9WVB6 61 aa17.3■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 BokO35425 213 aa17.29■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 P01724 129 aa17.29■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 P04942 107 aa17.29■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Svs5P30933 122 aa17.29■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Rpl12P35979 165 aaKnown RBP17.29■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Mmp9P41245 730 aa17.29■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Zc4h2Q68FG0 224 aa17.29■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Q8VC23 124 aa17.29■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Olfr1449Q8VEV8 314 aa17.29■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Nxph3Q91VX5 252 aa17.29■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Stoml2Q99JB2 353 aaKnown RBP17.29■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Zdhhc16Q9ESG8 361 aa17.29■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Clec6aQ9JKF4 209 aa17.29■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Gm5819E9PZ96 154 aa17.28■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Cldn1O88551 211 aa17.28■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 CapgP24452 352 aaKnown RBP17.28■□□□□ 0.36
Ccdc88a-202ENSMUST00000109477 Olfr58Q7TRF6 309 aa17.28■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms