RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Gm3072F6SKY8 209 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gm17654F7AXR3 209 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 UngP97931 306 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Trav8d-1Q5R1H8 112 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Adora3Q61618 319 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Acaa1bQ8VCH0 424 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr1086Q8VFL9 310 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Ptpn13Q64512 2453 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rhox7aA2A4F1 281 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Nkx6-2D3Z4R4 277 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 MosP00536 390 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 HexbP20060 536 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Meox2P32443 303 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Plscr4P58196 326 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rhox4gQ2MDF7 205 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rhox4dQ2MDG0 205 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rhox4eQ504P9 205 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr1168Q7TR25 312 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Tm2d3Q8BJ83 261 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Vmn1r62Q8R2C0 300 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Plekha2Q9ERS5 425 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rhox4bQ9JI43 205 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Ighv5-2A0A0A6YVX8 117 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 6430628N08RikA0A0U1RQ45 177 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gm12830F6XVH0 157 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Cd300lbQ3U497 209 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr335-psQ7TRY6 312 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 GcaQ8VC88 220 aa11.31□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Igkv1-131A0A140T8M8 120 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Foxa2P35583 459 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Fgf7P36363 194 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Hist1h1aP43275 213 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Isoc2aP85094 206 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Treml4Q3LRV9 263 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr147Q60886 317 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Tgfbr1Q64729 503 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rsl1Q7M6Y1 485 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Ppp1r3cQ7TMB3 317 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr305Q7TS02 319 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Mus81Q91ZJ0 551 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gins1Q9CZ15 196 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 CnmdQ9Z1F6 334 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rev3lQ61493 3122 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 C1ql1O88992 258 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Slc25a4P48962 298 aaKnown RBP11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Dnase2P56542 353 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Ube2g2P60605 165 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rnf150Q5DTZ6 437 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Spock1Q62288 442 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rnf24Q8BGI1 148 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Cby1Q9D1C2 127 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Vmn1r50Q9EP51 310 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Kdf1A2A9F4 397 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr1098A2AVB0 315 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Hist1h1bP43276 223 aaKnown RBP11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gm1673Q3UR78 90 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Vkorc1l1Q6TEK5 176 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Ifna16Q810G1 189 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Cd226Q8K4F0 333 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Klhdc3Q8VEM9 382 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 FaimQ9WUD8 179 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Myo9aQ8C170 2542 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Trav15-2-dv6-2A0A075B650 123 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Cpsf4lE9Q2N0 280 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 H2-Ab1P01921 265 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Tmem18Q3TUD9 140 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rnf166Q3U9F6 237 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Znf260Q62513 407 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Zfp663Q6NXM6 656 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Wdr82Q8BFQ4 313 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 RhovQ8VDU1 236 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Tmem128Q9CZB9 163 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Trappc2lQ9JME7 139 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Hsd17b6Q9R092 317 aa11.3□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gm28285A0A087WQ54 102 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 A930017K11RikE0CXQ2 571 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Npffr1E9Q468 432 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Sft2d2Q8VD57 159 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr470Q8VF65 314 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr492Q8VFD1 314 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Lysmd2Q9D7V2 215 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Eif3gQ9Z1D1 320 aaKnown RBP11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gm3550W4VSN7 160 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr685A0A1L1SVG7 331 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Arl16B1ATY8 173 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 CfdP03953 259 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Zfp58P16372 489 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Tpsb2P21845 276 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 P2ry1P49650 373 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gm20816Q5FWD4 227 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Ccsmst1Q6RUT7 136 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rpp21Q8R040 150 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rab4bQ91ZR1 213 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Mrps36Q9CQX8 102 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gins3Q9CY94 216 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 StrapQ9Z1Z2 350 aaKnown RBP11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Trav18A0A075B656 109 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gm7697A0A0J9YUH2 350 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gm9495A0A0J9YUZ3 350 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Defa-rs1P17533 116 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 61.2 ms