Protein–RNA interactions for Protein: Q8R040

Rpp21, Ribonuclease P protein subunit p21, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp21Q8R040 Gm25239-201ENSMUST00000174915 86 ntBASIC28.62■■■□□ 2.17
Rpp21Q8R040 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rpp21Q8R040 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Rpp21Q8R040 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Rpp21Q8R040 Psd-208ENSMUST00000224556 2034 ntBASIC26.38■■□□□ 1.81
Rpp21Q8R040 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rpp21Q8R040 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Rpp21Q8R040 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rpp21Q8R040 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rpp21Q8R040 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rpp21Q8R040 Gm15042-201ENSMUST00000120212 883 ntBASIC25.73■■□□□ 1.71
Rpp21Q8R040 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rpp21Q8R040 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rpp21Q8R040 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rpp21Q8R040 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.34■■□□□ 1.65
Rpp21Q8R040 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Rpp21Q8R040 Gm15045-201ENSMUST00000117359 883 ntBASIC25.25■■□□□ 1.63
Rpp21Q8R040 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rpp21Q8R040 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rpp21Q8R040 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rpp21Q8R040 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Rpp21Q8R040 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rpp21Q8R040 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpp21Q8R040 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Rpp21Q8R040 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rpp21Q8R040 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rpp21Q8R040 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.59■■□□□ 1.53
Rpp21Q8R040 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rpp21Q8R040 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rpp21Q8R040 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rpp21Q8R040 Gm24109-201ENSMUST00000175489 103 ntBASIC24.47■■□□□ 1.51
Rpp21Q8R040 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.46■■□□□ 1.51
Rpp21Q8R040 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rpp21Q8R040 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rpp21Q8R040 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rpp21Q8R040 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rpp21Q8R040 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Rpp21Q8R040 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.17■■□□□ 1.46
Rpp21Q8R040 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpp21Q8R040 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.06■■□□□ 1.44
Rpp21Q8R040 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.06■■□□□ 1.44
Rpp21Q8R040 Gm23366-201ENSMUST00000175022 89 ntBASIC24.04■■□□□ 1.44
Rpp21Q8R040 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpp21Q8R040 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rpp21Q8R040 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpp21Q8R040 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpp21Q8R040 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rpp21Q8R040 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rpp21Q8R040 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpp21Q8R040 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpp21Q8R040 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rpp21Q8R040 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.62■■□□□ 1.37
Rpp21Q8R040 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Rpp21Q8R040 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.58■■□□□ 1.37
Rpp21Q8R040 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rpp21Q8R040 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpp21Q8R040 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rpp21Q8R040 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.42■■□□□ 1.34
Rpp21Q8R040 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rpp21Q8R040 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.4■■□□□ 1.34
Rpp21Q8R040 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rpp21Q8R040 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rpp21Q8R040 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rpp21Q8R040 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Rpp21Q8R040 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rpp21Q8R040 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpp21Q8R040 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpp21Q8R040 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpp21Q8R040 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpp21Q8R040 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpp21Q8R040 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Rpp21Q8R040 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rpp21Q8R040 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpp21Q8R040 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rpp21Q8R040 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
Rpp21Q8R040 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpp21Q8R040 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpp21Q8R040 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpp21Q8R040 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.83■■□□□ 1.25
Rpp21Q8R040 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rpp21Q8R040 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rpp21Q8R040 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rpp21Q8R040 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
Rpp21Q8R040 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rpp21Q8R040 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpp21Q8R040 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rpp21Q8R040 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpp21Q8R040 Gm27325-201ENSMUST00000175467 74 ntBASIC22.66■■□□□ 1.22
Rpp21Q8R040 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rpp21Q8R040 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Rpp21Q8R040 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rpp21Q8R040 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rpp21Q8R040 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rpp21Q8R040 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rpp21Q8R040 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Rpp21Q8R040 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rpp21Q8R040 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.55■■□□□ 1.2
Rpp21Q8R040 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp21Q8R040 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpp21Q8R040 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.45■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms